RNA–Protein interactions for RNA: ENST00000581583.1

RTTN-207, Transcript of rotatin, humanhuman

TSL 2

Gene RTTN, Length 2,355 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-207ENST00000581583 FAM160B2Q86V87 743 aa13.37□□□□□ -0.27
RTTN-207ENST00000581583 SYT2Q8N9I0 419 aaPredicted RBP13.37□□□□□ -0.27
RTTN-207ENST00000581583 GLIS3Q8NEA6 775 aa13.37□□□□□ -0.27
RTTN-207ENST00000581583 EDEM3Q9BZQ6 932 aa13.37□□□□□ -0.27
RTTN-207ENST00000581583 PDGFDQ9GZP0 370 aaPredicted RBP13.37□□□□□ -0.27
RTTN-207ENST00000581583 RANBP17Q9H2T7 1088 aaKnown RBP13.37□□□□□ -0.27
RTTN-207ENST00000581583 VCPKMTQ9H867 229 aa13.37□□□□□ -0.27
RTTN-207ENST00000581583 COL4A3BPQ9Y5P4 624 aa13.37□□□□□ -0.27
RTTN-207ENST00000581583 EIF3CLB5ME19 914 aaKnown RBP13.37□□□□□ -0.27
RTTN-207ENST00000581583 NKRFO15226 690 aaKnown RBP eCLIP13.37□□□□□ -0.27
RTTN-207ENST00000581583 IPO7O95373 1038 aaKnown RBP13.37□□□□□ -0.27
RTTN-207ENST00000581583 ZNF76P36508 570 aa13.37□□□□□ -0.27
RTTN-207ENST00000581583 CAP2P40123 477 aa13.37□□□□□ -0.27
RTTN-207ENST00000581583 KLK7P49862 253 aa13.37□□□□□ -0.27
RTTN-207ENST00000581583 MARSP56192 900 aaKnown RBP13.37□□□□□ -0.27
RTTN-207ENST00000581583 FAM83BQ5T0W9 1011 aa13.37□□□□□ -0.27
RTTN-207ENST00000581583 NCAPH2Q6IBW4 605 aa13.37□□□□□ -0.27
RTTN-207ENST00000581583 POTEAQ6S8J7 498 aa13.37□□□□□ -0.27
RTTN-207ENST00000581583 PPP4R3CPQ6ZMV5 832 aa13.37□□□□□ -0.27
RTTN-207ENST00000581583 RSRC2Q7L4I2 434 aaKnown RBP13.37□□□□□ -0.27
RTTN-207ENST00000581583 NIM1KQ8IY84 436 aa13.37□□□□□ -0.27
RTTN-207ENST00000581583 GPR161Q8N6U8 529 aaKnown RBP13.37□□□□□ -0.27
RTTN-207ENST00000581583 EIF3CQ99613 913 aaKnown RBP13.37□□□□□ -0.27
RTTN-207ENST00000581583 ARID3AQ99856 593 aa13.37□□□□□ -0.27
RTTN-207ENST00000581583 POLR3CQ9BUI4 534 aaPredicted RBP13.37□□□□□ -0.27
RTTN-207ENST00000581583 NHEJ1Q9H9Q4 299 aaPredicted RBP13.37□□□□□ -0.27
RTTN-207ENST00000581583 EMILIN3Q9NT22 766 aa13.37□□□□□ -0.27
RTTN-207ENST00000581583 ARGLU1Q9NWB6 273 aaPredicted RBP13.37□□□□□ -0.27
RTTN-207ENST00000581583 VAV3Q9UKW4 847 aa13.37□□□□□ -0.27
RTTN-207ENST00000581583 POTEFA5A3E0 1075 aa13.36□□□□□ -0.27
RTTN-207ENST00000581583 GCOM1H8Y6P7 765 aaPredicted RBP13.36□□□□□ -0.27
RTTN-207ENST00000581583 TRAF5O00463 557 aa13.36□□□□□ -0.27
RTTN-207ENST00000581583 POLR2MP0CAP2 368 aa13.36□□□□□ -0.27
RTTN-207ENST00000581583 POTEIP0CG38 1075 aa13.36□□□□□ -0.27
RTTN-207ENST00000581583 POTEGQ6S5H5 508 aa13.36□□□□□ -0.27
RTTN-207ENST00000581583 POTEEQ6S8J3 1075 aa13.36□□□□□ -0.27
RTTN-207ENST00000581583 SLC35F6Q8N357 371 aa13.36□□□□□ -0.27
RTTN-207ENST00000581583 CEP112Q8N8E3 955 aa13.36□□□□□ -0.27
RTTN-207ENST00000581583 ZBED3Q96IU2 234 aaPredicted RBP13.36□□□□□ -0.27
RTTN-207ENST00000581583 NAPGQ99747 312 aaPredicted RBP13.36□□□□□ -0.27
RTTN-207ENST00000581583 VEZTQ9HBM0 779 aa13.36□□□□□ -0.27
RTTN-207ENST00000581583 MRPL11Q9Y3B7 192 aaKnown RBP13.36□□□□□ -0.27
RTTN-207ENST00000581583 IGLV3-22A0A075B6J6 115 aa13.36□□□□□ -0.27
RTTN-207ENST00000581583 ABL1P00519 1130 aa13.36□□□□□ -0.27
RTTN-207ENST00000581583 KRT18P05783 430 aaKnown RBP13.36□□□□□ -0.27
RTTN-207ENST00000581583 EDRF1Q3B7T1 1238 aa13.36□□□□□ -0.27
RTTN-207ENST00000581583 SCFD1Q8WVM8 642 aa13.36□□□□□ -0.27
RTTN-207ENST00000581583 RABGGTAQ92696 567 aa13.36□□□□□ -0.27
RTTN-207ENST00000581583 UIMC1Q96RL1 719 aa13.36□□□□□ -0.27
RTTN-207ENST00000581583 TMEM39BQ9GZU3 492 aa13.36□□□□□ -0.27
RTTN-207ENST00000581583 KCTD10Q9H3F6 313 aa13.36□□□□□ -0.27
RTTN-207ENST00000581583 FEM1BQ9UK73 627 aa13.36□□□□□ -0.27
RTTN-207ENST00000581583 KRT86O43790 486 aa13.35□□□□□ -0.27
RTTN-207ENST00000581583 ASNSP08243 561 aa13.35□□□□□ -0.27
RTTN-207ENST00000581583 GIT2Q14161 759 aa13.35□□□□□ -0.27
RTTN-207ENST00000581583 SRGAP1Q7Z6B7 1085 aa13.35□□□□□ -0.27
RTTN-207ENST00000581583 ZC3H3Q8IXZ2 948 aaKnown RBP13.35□□□□□ -0.27
RTTN-207ENST00000581583 EHBP1Q8NDI1 1231 aa13.35□□□□□ -0.27
RTTN-207ENST00000581583 GOLGA1Q92805 767 aa13.35□□□□□ -0.27
RTTN-207ENST00000581583 EHMT1Q9H9B1 1298 aa13.35□□□□□ -0.27
RTTN-207ENST00000581583 PGAP2Q9UHJ9 254 aa13.35□□□□□ -0.27
RTTN-207ENST00000581583 NPHP3-ACAD11A0A0J9YXS1 232 aa13.35□□□□□ -0.27
RTTN-207ENST00000581583 CFBP00751 764 aa13.35□□□□□ -0.27
RTTN-207ENST00000581583 BAG6P46379 1132 aa13.35□□□□□ -0.27
RTTN-207ENST00000581583 HERVK_113P62684 666 aa13.35□□□□□ -0.27
RTTN-207ENST00000581583 CYP2W1Q8TAV3 490 aa13.35□□□□□ -0.27
RTTN-207ENST00000581583 CCDC42Q96M95 316 aa13.35□□□□□ -0.27
RTTN-207ENST00000581583 DEFB129Q9H1M3 183 aa13.35□□□□□ -0.27
RTTN-207ENST00000581583 MMRN2Q9H8L6 949 aa13.35□□□□□ -0.27
RTTN-207ENST00000581583 COL4A5P29400 1685 aa13.34□□□□□ -0.27
RTTN-207ENST00000581583 PSMC6P62333 389 aa13.34□□□□□ -0.27
RTTN-207ENST00000581583 CXCL9Q07325 125 aa13.34□□□□□ -0.27
RTTN-207ENST00000581583 SF3B2Q13435 895 aaKnown RBP13.34□□□□□ -0.27
RTTN-207ENST00000581583 CCDC122Q5T0U0 273 aa13.34□□□□□ -0.27
RTTN-207ENST00000581583 OTOP1Q7RTM1 612 aa13.34□□□□□ -0.27
RTTN-207ENST00000581583 HSD17B14Q9BPX1 270 aa13.34□□□□□ -0.27
RTTN-207ENST00000581583 EIF2AK1Q9BQI3 630 aaKnown RBP13.34□□□□□ -0.27
RTTN-207ENST00000581583 FAM207AQ9NSI2 230 aaPredicted RBP13.34□□□□□ -0.27
RTTN-207ENST00000581583 FAM184BQ9ULE4 1060 aa13.34□□□□□ -0.27
RTTN-207ENST00000581583 GUCA1BQ9UMX6 200 aa13.34□□□□□ -0.27
RTTN-207ENST00000581583 SPDYE4A6NLX3 237 aa13.34□□□□□ -0.27
RTTN-207ENST00000581583 WNT10BO00744 389 aa13.34□□□□□ -0.27
RTTN-207ENST00000581583 EYA4O95677 639 aa13.34□□□□□ -0.27
RTTN-207ENST00000581583 MUTP22033 750 aa13.34□□□□□ -0.27
RTTN-207ENST00000581583 CLCN6P51797 869 aa13.34□□□□□ -0.27
RTTN-207ENST00000581583 CHMP4BP1P59074 171 aa13.34□□□□□ -0.27
RTTN-207ENST00000581583 PABPC4Q13310 644 aaKnown RBP eCLIP13.34□□□□□ -0.27
RTTN-207ENST00000581583 PPP2R5CQ13362 524 aa13.34□□□□□ -0.27
RTTN-207ENST00000581583 WHAMMP3Q1A5X7 153 aa13.34□□□□□ -0.27
RTTN-207ENST00000581583 CCDC40Q4G0X9 1142 aa13.34□□□□□ -0.27
RTTN-207ENST00000581583 MIGA2Q7L4E1 593 aa13.34□□□□□ -0.27
RTTN-207ENST00000581583 TRIM59Q8IWR1 403 aa13.34□□□□□ -0.27
RTTN-207ENST00000581583 FGFBP2Q9BYJ0 223 aa13.34□□□□□ -0.27
RTTN-207ENST00000581583 NUCKS1Q9H1E3 243 aaKnown RBP13.34□□□□□ -0.27
RTTN-207ENST00000581583 TUFT1Q9NNX1 390 aa13.34□□□□□ -0.27
RTTN-207ENST00000581583 TBC1D7Q9P0N9 293 aa13.34□□□□□ -0.27
RTTN-207ENST00000581583 PIM2Q9P1W9 311 aa13.34□□□□□ -0.27
RTTN-207ENST00000581583 TRAF3IP3Q9Y228 551 aa13.34□□□□□ -0.27
RTTN-207ENST00000581583 MEIS1O00470 390 aa13.33□□□□□ -0.28
RTTN-207ENST00000581583 PSMD10O75832 226 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms