RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 MFSD14BQ5SR56 506 aa15.72■□□□□ 0.11
CSNK1D-217ENST00000581241 TBC1D1Q86TI0 1168 aaPredicted RBP15.72■□□□□ 0.11
CSNK1D-217ENST00000581241 PNMA2Q9UL42 364 aa15.72■□□□□ 0.11
CSNK1D-217ENST00000581241 INTUQ9ULD6 942 aa15.72■□□□□ 0.11
CSNK1D-217ENST00000581241 SCINQ9Y6U3 715 aa15.72■□□□□ 0.11
CSNK1D-217ENST00000581241 SEMA3EO15041 775 aa15.71■□□□□ 0.11
CSNK1D-217ENST00000581241 KCNA6P17658 529 aa15.71■□□□□ 0.11
CSNK1D-217ENST00000581241 IFRD2Q12894 506 aaPredicted RBP15.71■□□□□ 0.11
CSNK1D-217ENST00000581241 TMEM60Q9H2L4 133 aa15.71■□□□□ 0.11
CSNK1D-217ENST00000581241 TMEM206Q9H813 350 aa15.71■□□□□ 0.11
CSNK1D-217ENST00000581241 NRBP2Q9NSY0 501 aa15.71■□□□□ 0.11
CSNK1D-217ENST00000581241 MYO1CO00159 1063 aa15.71■□□□□ 0.11
CSNK1D-217ENST00000581241 ATP5HO75947 161 aa15.71■□□□□ 0.11
CSNK1D-217ENST00000581241 TMOD1P28289 359 aa15.71■□□□□ 0.11
CSNK1D-217ENST00000581241 SRRM1Q8IYB3 904 aaKnown RBP15.71■□□□□ 0.11
CSNK1D-217ENST00000581241 COPRSQ9NQ92 184 aa15.71■□□□□ 0.11
CSNK1D-217ENST00000581241 KCNQ3O43525 872 aa15.71■□□□□ 0.11
CSNK1D-217ENST00000581241 SPAG7O75391 227 aa15.71■□□□□ 0.11
CSNK1D-217ENST00000581241 CCNE1P24864 410 aa15.71■□□□□ 0.11
CSNK1D-217ENST00000581241 MAML1Q92585 1016 aa15.71■□□□□ 0.11
CSNK1D-217ENST00000581241 CCDC124Q96CT7 223 aaKnown RBP15.71■□□□□ 0.11
CSNK1D-217ENST00000581241 UBE2TQ9NPD8 197 aaPredicted RBP15.71■□□□□ 0.11
CSNK1D-217ENST00000581241 TLR3O15455 904 aaKnown RBP15.71■□□□□ 0.11
CSNK1D-217ENST00000581241 FKBP3Q00688 224 aaKnown RBP15.71■□□□□ 0.11
CSNK1D-217ENST00000581241 DEUP1Q05D60 604 aa15.71■□□□□ 0.11
CSNK1D-217ENST00000581241 KCTD6Q8NC69 237 aa15.71■□□□□ 0.11
CSNK1D-217ENST00000581241 SMCR8Q8TEV9 937 aaPredicted RBP15.71■□□□□ 0.11
CSNK1D-217ENST00000581241 BPIFA3Q9BQP9 254 aa15.71■□□□□ 0.11
CSNK1D-217ENST00000581241 ANGPTL3Q9Y5C1 460 aa15.71■□□□□ 0.11
CSNK1D-217ENST00000581241 MED7O43513 233 aa15.71■□□□□ 0.1
CSNK1D-217ENST00000581241 NCF2P19878 526 aaPredicted RBP15.71■□□□□ 0.1
CSNK1D-217ENST00000581241 ATP2B4P23634 1241 aa15.71■□□□□ 0.1
CSNK1D-217ENST00000581241 GTF2IP78347 998 aa15.71■□□□□ 0.1
CSNK1D-217ENST00000581241 CYP4A11Q02928 519 aa15.71■□□□□ 0.1
CSNK1D-217ENST00000581241 CHRNDQ07001 517 aa15.71■□□□□ 0.1
CSNK1D-217ENST00000581241 DLGAP5Q15398 846 aa15.71■□□□□ 0.1
CSNK1D-217ENST00000581241 RESP18Q5W5W9 173 aa15.71■□□□□ 0.1
CSNK1D-217ENST00000581241 RNF207Q6ZRF8 634 aa15.71■□□□□ 0.1
CSNK1D-217ENST00000581241 TTLL7Q6ZT98 887 aa15.71■□□□□ 0.1
CSNK1D-217ENST00000581241 LRRIQ4A6NIV6 560 aa15.7■□□□□ 0.1
CSNK1D-217ENST00000581241 ALDH1B1P30837 517 aa15.7■□□□□ 0.1
CSNK1D-217ENST00000581241 TFDP1Q14186 410 aa15.7■□□□□ 0.1
CSNK1D-217ENST00000581241 CC2D1AQ6P1N0 951 aaPredicted RBP15.7■□□□□ 0.1
CSNK1D-217ENST00000581241 SYNJ2BP-COX16A0A087WUM0 186 aa15.7■□□□□ 0.1
CSNK1D-217ENST00000581241 MMEP08473 750 aa15.7■□□□□ 0.1
CSNK1D-217ENST00000581241 PDE6BP35913 854 aa15.7■□□□□ 0.1
CSNK1D-217ENST00000581241 RPS8P62241 208 aaKnown RBP15.7■□□□□ 0.1
CSNK1D-217ENST00000581241 PABPC4Q13310 644 aaKnown RBP eCLIP15.7■□□□□ 0.15e-8■□□□□ 8
CSNK1D-217ENST00000581241 TRIP13Q15645 432 aaPredicted RBP15.7■□□□□ 0.1
CSNK1D-217ENST00000581241 COX16Q9P0S2 106 aa15.7■□□□□ 0.1
CSNK1D-217ENST00000581241 TBX22Q9Y458 520 aa15.7■□□□□ 0.1
CSNK1D-217ENST00000581241 PALM3A6NDB9 673 aaPredicted RBP15.7■□□□□ 0.1
CSNK1D-217ENST00000581241 GCFC2P16383 781 aaKnown RBP15.7■□□□□ 0.1
CSNK1D-217ENST00000581241 ADORA1P30542 326 aa15.7■□□□□ 0.1
CSNK1D-217ENST00000581241 GYS2P54840 703 aa15.7■□□□□ 0.1
CSNK1D-217ENST00000581241 BASP1P80723 227 aaKnown RBP15.7■□□□□ 0.1
CSNK1D-217ENST00000581241 ELAC2Q9BQ52 826 aaKnown RBP15.7■□□□□ 0.1
CSNK1D-217ENST00000581241 ABCD1P33897 745 aa15.7■□□□□ 0.1
CSNK1D-217ENST00000581241 KRT31Q15323 416 aa15.7■□□□□ 0.1
CSNK1D-217ENST00000581241 SLFN13Q68D06 897 aa15.7■□□□□ 0.1
CSNK1D-217ENST00000581241 EEF2KMTQ96G04 330 aa15.7■□□□□ 0.1
CSNK1D-217ENST00000581241 MID2Q9UJV3 735 aa15.7■□□□□ 0.1
CSNK1D-217ENST00000581241 WDR91A4D1P6 747 aa15.69■□□□□ 0.1
CSNK1D-217ENST00000581241 PRPF3O43395 683 aaKnown RBP15.69■□□□□ 0.1
CSNK1D-217ENST00000581241 ICE2Q659A1 982 aa15.69■□□□□ 0.1
CSNK1D-217ENST00000581241 LARGE2Q8N3Y3 721 aa15.69■□□□□ 0.1
CSNK1D-217ENST00000581241 IL17REQ8NFR9 667 aa15.69■□□□□ 0.1
CSNK1D-217ENST00000581241 ZNF577Q9BSK1 485 aa15.69■□□□□ 0.1
CSNK1D-217ENST00000581241 LRRN2O75325 713 aa15.69■□□□□ 0.1
CSNK1D-217ENST00000581241 ICA1Q05084 483 aa15.69■□□□□ 0.1
CSNK1D-217ENST00000581241 CENPUQ71F23 418 aa15.69■□□□□ 0.1
CSNK1D-217ENST00000581241 DCLK2Q8N568 766 aa15.69■□□□□ 0.1
CSNK1D-217ENST00000581241 DBNLQ9UJU6 430 aaKnown RBP15.69■□□□□ 0.1
CSNK1D-217ENST00000581241 TLK1Q9UKI8 766 aa15.69■□□□□ 0.1
CSNK1D-217ENST00000581241 CLIC2O15247 247 aa15.69■□□□□ 0.1
CSNK1D-217ENST00000581241 GGCXP38435 758 aa15.69■□□□□ 0.1
CSNK1D-217ENST00000581241 DYNLT1P63172 113 aa15.69■□□□□ 0.1
CSNK1D-217ENST00000581241 HDLBPQ00341 1268 aaKnown RBP15.69■□□□□ 0.1
CSNK1D-217ENST00000581241 CALR3Q96L12 384 aaKnown RBP15.69■□□□□ 0.1
CSNK1D-217ENST00000581241 SEPT9Q9UHD8 586 aaPredicted RBP15.69■□□□□ 0.1
CSNK1D-217ENST00000581241 TOM1O60784 492 aa15.69■□□□□ 0.1
CSNK1D-217ENST00000581241 LARGE1O95461 756 aa15.69■□□□□ 0.1
CSNK1D-217ENST00000581241 EEF1B2P24534 225 aaKnown RBP15.69■□□□□ 0.1
CSNK1D-217ENST00000581241 NBPF9Q3BBW0 867 aa15.69■□□□□ 0.1
CSNK1D-217ENST00000581241 DNAJC24Q6P3W2 148 aa15.69■□□□□ 0.1
CSNK1D-217ENST00000581241 RASGRP4Q8TDF6 673 aa15.69■□□□□ 0.1
CSNK1D-217ENST00000581241 CCDC188H7C350 402 aa15.69■□□□□ 0.1
CSNK1D-217ENST00000581241 SYT2Q8N9I0 419 aaPredicted RBP15.69■□□□□ 0.1
CSNK1D-217ENST00000581241 IPO5O00410 1097 aaKnown RBP15.68■□□□□ 0.1
CSNK1D-217ENST00000581241 PODXLO00592 558 aa15.68■□□□□ 0.1
CSNK1D-217ENST00000581241 ADD2P35612 726 aa15.68■□□□□ 0.1
CSNK1D-217ENST00000581241 THOC5Q13769 683 aaKnown RBP15.68■□□□□ 0.1
CSNK1D-217ENST00000581241 MCUQ8NE86 351 aa15.68■□□□□ 0.1
CSNK1D-217ENST00000581241 MCF2P10911 925 aa15.68■□□□□ 0.1
CSNK1D-217ENST00000581241 PHKG2P15735 406 aa15.68■□□□□ 0.1
CSNK1D-217ENST00000581241 LRRC63Q05C16 580 aa15.68■□□□□ 0.1
CSNK1D-217ENST00000581241 SPARCL1Q14515 664 aa15.68■□□□□ 0.1
CSNK1D-217ENST00000581241 KMT5AQ9NQR1 393 aa15.68■□□□□ 0.1
CSNK1D-217ENST00000581241 PCDHA1Q9Y5I3 950 aa15.68■□□□□ 0.1
CSNK1D-217ENST00000581241 ERBB4Q15303 1308 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms