RNA–Protein interactions for RNA: ENST00000581204.1

SUPT4H1-206, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-206ENST00000581204 GADL1Q6ZQY3 521 aa9.72□□□□□ -0.85
SUPT4H1-206ENST00000581204 TMEM179Q6ZVK1 233 aa9.72□□□□□ -0.85
SUPT4H1-206ENST00000581204 PHKBQ93100 1093 aa9.72□□□□□ -0.85
SUPT4H1-206ENST00000581204 KANSL2Q9H9L4 492 aa9.72□□□□□ -0.85
SUPT4H1-206ENST00000581204 TMPRSS4Q9NRS4 437 aa9.72□□□□□ -0.85
SUPT4H1-206ENST00000581204 CLIP2Q9UDT6 1046 aa9.72□□□□□ -0.85
SUPT4H1-206ENST00000581204 AGTPBP1Q9UPW5 1226 aa9.72□□□□□ -0.85
SUPT4H1-206ENST00000581204 ATP6V1DQ9Y5K8 247 aa9.72□□□□□ -0.85
SUPT4H1-206ENST00000581204 NID2Q14112 1375 aa9.72□□□□□ -0.85
SUPT4H1-206ENST00000581204 DOCK1Q14185 1865 aa9.71□□□□□ -0.85
SUPT4H1-206ENST00000581204 IGKV6D-41A0A0C4DH26 115 aa9.71□□□□□ -0.86
SUPT4H1-206ENST00000581204 TRIM43BA6NCK2 446 aa9.71□□□□□ -0.86
SUPT4H1-206ENST00000581204 FAM86C2PA6NEL3 165 aa9.71□□□□□ -0.86
SUPT4H1-206ENST00000581204 TMEM229AB2RXF0 380 aa9.71□□□□□ -0.86
SUPT4H1-206ENST00000581204 GH2P01242 217 aa9.71□□□□□ -0.86
SUPT4H1-206ENST00000581204 PARP1P09874 1014 aaKnown RBP9.71□□□□□ -0.86
SUPT4H1-206ENST00000581204 IFNAR1P17181 557 aa9.71□□□□□ -0.86
SUPT4H1-206ENST00000581204 PTPRAP18433 802 aa9.71□□□□□ -0.86
SUPT4H1-206ENST00000581204 IGFBP4P22692 258 aa9.71□□□□□ -0.86
SUPT4H1-206ENST00000581204 ITGB8P26012 769 aa9.71□□□□□ -0.86
SUPT4H1-206ENST00000581204 ICA1Q05084 483 aa9.71□□□□□ -0.86
SUPT4H1-206ENST00000581204 TRIM29Q14134 588 aa9.71□□□□□ -0.86
SUPT4H1-206ENST00000581204 GRM4Q14833 912 aa9.71□□□□□ -0.86
SUPT4H1-206ENST00000581204 SEPT2Q15019 361 aa9.71□□□□□ -0.86
SUPT4H1-206ENST00000581204 NTRK3Q16288 839 aa9.71□□□□□ -0.86
SUPT4H1-206ENST00000581204 CLEC10AQ8IUN9 316 aa9.71□□□□□ -0.86
SUPT4H1-206ENST00000581204 CMTR1Q8N1G2 835 aaKnown RBP9.71□□□□□ -0.86
SUPT4H1-206ENST00000581204 LRRC47Q8N1G4 583 aaKnown RBP9.71□□□□□ -0.86
SUPT4H1-206ENST00000581204 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.71□□□□□ -0.86
SUPT4H1-206ENST00000581204 TSEN2Q8NCE0 465 aaKnown RBP9.71□□□□□ -0.86
SUPT4H1-206ENST00000581204 COL26A1Q96A83 441 aa9.71□□□□□ -0.86
SUPT4H1-206ENST00000581204 EMID1Q96A84 441 aaPredicted RBP9.71□□□□□ -0.86
SUPT4H1-206ENST00000581204 TRIM43Q96BQ3 446 aaPredicted RBP9.71□□□□□ -0.86
SUPT4H1-206ENST00000581204 C8orf76Q96K31 380 aa9.71□□□□□ -0.86
SUPT4H1-206ENST00000581204 MAP3K14Q99558 947 aa9.71□□□□□ -0.86
SUPT4H1-206ENST00000581204 ALG1Q9BT22 464 aa9.71□□□□□ -0.86
SUPT4H1-206ENST00000581204 PDLIM7Q9NR12 457 aa9.71□□□□□ -0.86
SUPT4H1-206ENST00000581204 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.71□□□□□ -0.86
SUPT4H1-206ENST00000581204 ISY1Q9ULR0 285 aaKnown RBP9.71□□□□□ -0.86
SUPT4H1-206ENST00000581204 ZDHHC9Q9Y397 364 aa9.71□□□□□ -0.86
SUPT4H1-206ENST00000581204 WASF2Q9Y6W5 498 aa9.71□□□□□ -0.86
SUPT4H1-206ENST00000581204 ZHX2Q9Y6X8 837 aa9.71□□□□□ -0.86
SUPT4H1-206ENST00000581204 GREB1LQ9C091 1923 aaPredicted RBP9.7□□□□□ -0.86
SUPT4H1-206ENST00000581204 GOLGA6L22H0YM25 854 aa9.7□□□□□ -0.86
SUPT4H1-206ENST00000581204 PLEKHA8P1O95397 391 aa9.7□□□□□ -0.86
SUPT4H1-206ENST00000581204 DEXIO95424 95 aa9.7□□□□□ -0.86
SUPT4H1-206ENST00000581204 F13A1P00488 732 aa9.7□□□□□ -0.86
SUPT4H1-206ENST00000581204 XRCC5P13010 732 aaKnown RBP9.7□□□□□ -0.86
SUPT4H1-206ENST00000581204 EEF2P13639 858 aaKnown RBP9.7□□□□□ -0.86
SUPT4H1-206ENST00000581204 FDPSP14324 419 aaKnown RBP9.7□□□□□ -0.86
SUPT4H1-206ENST00000581204 CYP2B6P20813 491 aa9.7□□□□□ -0.86
SUPT4H1-206ENST00000581204 SNX17Q15036 470 aa9.7□□□□□ -0.86
SUPT4H1-206ENST00000581204 NFKBIBQ15653 356 aa9.7□□□□□ -0.86
SUPT4H1-206ENST00000581204 MCTP1Q6DN14 999 aa9.7□□□□□ -0.86
SUPT4H1-206ENST00000581204 TMTC3Q6ZXV5 915 aa9.7□□□□□ -0.86
SUPT4H1-206ENST00000581204 SCYL3Q8IZE3 742 aa9.7□□□□□ -0.86
SUPT4H1-206ENST00000581204 RGS22Q8NE09 1264 aa9.7□□□□□ -0.86
SUPT4H1-206ENST00000581204 USP6NLQ92738 828 aa9.7□□□□□ -0.86
SUPT4H1-206ENST00000581204 RNPC3Q96LT9 517 aaKnown RBP9.7□□□□□ -0.86
SUPT4H1-206ENST00000581204 PRIMPOLQ96LW4 560 aa9.7□□□□□ -0.86
SUPT4H1-206ENST00000581204 LZTS2Q9BRK4 669 aa9.7□□□□□ -0.86
SUPT4H1-206ENST00000581204 RNF26Q9BY78 433 aaPredicted RBP9.7□□□□□ -0.86
SUPT4H1-206ENST00000581204 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.7□□□□□ -0.86
SUPT4H1-206ENST00000581204 NYAP2Q9P242 653 aa9.7□□□□□ -0.86
SUPT4H1-206ENST00000581204 PRKAG2Q9UGJ0 569 aa9.7□□□□□ -0.86
SUPT4H1-206ENST00000581204 MTMR6Q9Y217 621 aa9.7□□□□□ -0.86
SUPT4H1-206ENST00000581204 STK36Q9NRP7 1315 aa9.7□□□□□ -0.86
SUPT4H1-206ENST00000581204 USP34Q70CQ2 3546 aa9.69□□□□□ -0.86
SUPT4H1-206ENST00000581204 SOWAHDA6NJG2 315 aa9.69□□□□□ -0.86
SUPT4H1-206ENST00000581204 LRRC37A2A6NM11 1700 aa9.69□□□□□ -0.86
SUPT4H1-206ENST00000581204 PRPF3O43395 683 aaKnown RBP9.69□□□□□ -0.86
SUPT4H1-206ENST00000581204 LILRA1O75019 489 aa9.69□□□□□ -0.86
SUPT4H1-206ENST00000581204 GOLGA8HP0CJ92 632 aa9.69□□□□□ -0.86
SUPT4H1-206ENST00000581204 XBP1P17861 261 aa9.69□□□□□ -0.86
SUPT4H1-206ENST00000581204 ERCC3P19447 782 aa9.69□□□□□ -0.86
SUPT4H1-206ENST00000581204 CAP2P40123 477 aa9.69□□□□□ -0.86
SUPT4H1-206ENST00000581204 NOVP48745 357 aa9.69□□□□□ -0.86
SUPT4H1-206ENST00000581204 KCNQ1P51787 676 aa9.69□□□□□ -0.86
SUPT4H1-206ENST00000581204 GUCY1B3Q02153 619 aa9.69□□□□□ -0.86
SUPT4H1-206ENST00000581204 TFF2Q03403 129 aa9.69□□□□□ -0.86
SUPT4H1-206ENST00000581204 CCDC85BQ15834 202 aaPredicted RBP9.69□□□□□ -0.86
SUPT4H1-206ENST00000581204 CCL14Q16627 93 aa9.69□□□□□ -0.86
SUPT4H1-206ENST00000581204 CCDC96Q2M329 555 aa9.69□□□□□ -0.86
SUPT4H1-206ENST00000581204 SHROOM1Q2M3G4 852 aaPredicted RBP9.69□□□□□ -0.86
SUPT4H1-206ENST00000581204 FOXD4L6Q3SYB3 417 aaPredicted RBP9.69□□□□□ -0.86
SUPT4H1-206ENST00000581204 FOXD4L3Q6VB84 417 aaPredicted RBP9.69□□□□□ -0.86
SUPT4H1-206ENST00000581204 FERMT3Q86UX7 667 aa9.69□□□□□ -0.86
SUPT4H1-206ENST00000581204 SNIP1Q8TAD8 396 aaKnown RBP9.69□□□□□ -0.86
SUPT4H1-206ENST00000581204 PIBF1Q8WXW3 757 aa9.69□□□□□ -0.86
SUPT4H1-206ENST00000581204 TIFAQ96CG3 184 aa9.69□□□□□ -0.86
SUPT4H1-206ENST00000581204 PRDM12Q9H4Q4 367 aa9.69□□□□□ -0.86
SUPT4H1-206ENST00000581204 ARHGEF10LQ9HCE6 1279 aa9.69□□□□□ -0.86
SUPT4H1-206ENST00000581204 ZBTB21Q9ULJ3 1066 aa9.69□□□□□ -0.86
SUPT4H1-206ENST00000581204 ATP11BQ9Y2G3 1177 aa9.69□□□□□ -0.86
SUPT4H1-206ENST00000581204 BAZ2BQ9UIF8 2168 aaKnown RBP9.68□□□□□ -0.86
SUPT4H1-206ENST00000581204 FRMPD2Q68DX3 1309 aaPredicted RBP9.68□□□□□ -0.86
SUPT4H1-206ENST00000581204 KLRF2D3W0D1 207 aa9.68□□□□□ -0.86
SUPT4H1-206ENST00000581204 DNM1LO00429 736 aa9.68□□□□□ -0.86
SUPT4H1-206ENST00000581204 BAG4O95429 457 aaKnown RBP9.68□□□□□ -0.86
SUPT4H1-206ENST00000581204 ASNSP08243 561 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms