RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 NSUN6Q8TEA1 469 aaKnown RBP6.91□□□□□ -1.3
RNU4ATAC-201ENST00000580972 PIGOQ8TEQ8 1089 aa6.91□□□□□ -1.3
RNU4ATAC-201ENST00000580972 SMARCE1Q969G3 411 aa6.91□□□□□ -1.3
RNU4ATAC-201ENST00000580972 AK8Q96MA6 479 aa6.91□□□□□ -1.3
RNU4ATAC-201ENST00000580972 FAM20AQ96MK3 541 aa6.91□□□□□ -1.3
RNU4ATAC-201ENST00000580972 INPP4AQ96PE3 977 aaPredicted RBP6.91□□□□□ -1.3
RNU4ATAC-201ENST00000580972 RUSC1Q9BVN2 902 aa6.91□□□□□ -1.3
RNU4ATAC-201ENST00000580972 TEKT3Q9BXF9 490 aa6.91□□□□□ -1.3
RNU4ATAC-201ENST00000580972 FGFBP2Q9BYJ0 223 aa6.91□□□□□ -1.3
RNU4ATAC-201ENST00000580972 KIAA1024Q9UPX6 916 aa6.91□□□□□ -1.3
RNU4ATAC-201ENST00000580972 GDAQ9Y2T3 454 aa6.91□□□□□ -1.3
RNU4ATAC-201ENST00000580972 SCN4AP35499 1836 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 DNAJC25-GNG10A0A024R161 153 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 TMEM88BA6NKF7 163 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 TBX3O15119 743 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 SLC25A27O95847 323 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 RPN1P04843 607 aaKnown RBP6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 PLA2G4BP0C869 781 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 FCER1AP12319 257 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 KCNA2P16389 499 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 EDNRBP24530 442 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 ADORA2AP29274 412 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 CTGFP29279 349 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 STX17P56962 302 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 ASIC1P78348 528 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 SETQ01105 290 aaPredicted RBP6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 PPP2R5CQ13362 524 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 PDIA5Q14554 519 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 TAF1CQ15572 869 aaPredicted RBP6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 KMT5BQ4FZB7 885 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 HYIQ5T013 277 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 GJC2Q5T442 439 aaPredicted RBP6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 KLHL10Q6JEL2 608 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 NIPA1Q7RTP0 329 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 DYMQ7RTS9 669 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 TRMT1LQ7Z2T5 733 aaKnown RBP6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 GPBP1Q86WP2 473 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 IFNL1Q8IU54 200 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 SLFN12Q8IYM2 578 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 SPATA20Q8TB22 786 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 FAM200AQ8TCP9 573 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 COPS5Q92905 334 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 CALML4Q96GE6 196 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 CDK5RAP3Q96JB5 506 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 PARK7Q99497 189 aaKnown RBP6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 SH2D3AQ9BRG2 576 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 TRIM9Q9C026 710 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 PDGFCQ9NRA1 345 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 BMP2KQ9NSY1 1161 aaPredicted RBP6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 KBTBD4Q9NVX7 518 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 ANO10Q9NW15 660 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 MORF4L1Q9UBU8 362 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 CCDC39Q9UFE4 941 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 FBXO40Q9UH90 709 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 USP25Q9UHP3 1055 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 PNMA3Q9UL41 463 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 PNMA2Q9UL42 364 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 MAPK8IP1Q9UQF2 711 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 SLC45A1Q9Y2W3 748 aa6.9□□□□□ -1.3
RNU4ATAC-201ENST00000580972 PHIPQ8WWQ0 1821 aa6.9□□□□□ -1.31
RNU4ATAC-201ENST00000580972 MYH4Q9Y623 1939 aa6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 MANSC4A6NHS7 340 aaPredicted RBP6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 RSPH10B2B2RC85 870 aa6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 SPATA31C2B4DYI2 1134 aa6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 PPP1R3GB7ZBB8 358 aa6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 SLITRK3O94933 977 aa6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 RSPH10BP0C881 870 aa6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 BCRP11274 1271 aa6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 CYP11B2P19099 503 aa6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 UBA1P22314 1058 aaKnown RBP6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 YY1P25490 414 aa6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 ZNF165P49910 485 aa6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 MRE11P49959 708 aa6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 SLC12A3P55017 1021 aa6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 PDE4DQ08499 809 aa6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 CRHR2Q13324 411 aa6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 KCTD2Q14681 263 aa6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 NCAPHQ15003 741 aa6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 LRRC41Q15345 812 aa6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 EPHA7Q15375 998 aa6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 PTPN21Q16825 1174 aa6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 LY6KQ17RY6 165 aa6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 ZNF792Q3KQV3 632 aa6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 HSP90AA4PQ58FG1 418 aa6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 ARSHQ5FYA8 562 aa6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 NT5DC1Q5TFE4 455 aa6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 PLA2G4FQ68DD2 849 aa6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 MIER3Q7Z3K6 550 aa6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 GPR142Q7Z601 462 aa6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 TEX2Q8IWB9 1127 aa6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 TPH2Q8IWU9 490 aa6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 SAMD3Q8N6K7 520 aa6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 SHCBP1Q8NEM2 672 aa6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 NPLOC4Q8TAT6 608 aa6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 LARP4BQ92615 738 aaKnown RBP6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 GPRASP2Q96D09 838 aa6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 RIT2Q99578 217 aa6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 HSD17B14Q9BPX1 270 aa6.89□□□□□ -1.31
RNU4ATAC-201ENST00000580972 C7orf25Q9BPX7 421 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms