RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 PLEKHD1A6NEE1 506 aa5.37□□□□□ -1.55
SMG8-205ENST00000580798 MAFGO15525 162 aa5.37□□□□□ -1.55
SMG8-205ENST00000580798 FOXS1O43638 330 aa5.37□□□□□ -1.55
SMG8-205ENST00000580798 CYP7B1O75881 506 aa5.37□□□□□ -1.55
SMG8-205ENST00000580798 ZNF202O95125 648 aa5.37□□□□□ -1.55
SMG8-205ENST00000580798 CNOT4O95628 575 aaKnown RBP5.37□□□□□ -1.55
SMG8-205ENST00000580798 ANAPC15P60006 121 aa5.37□□□□□ -1.55
SMG8-205ENST00000580798 PRKD1Q15139 912 aaPredicted RBP5.37□□□□□ -1.55
SMG8-205ENST00000580798 MROH9Q5TGP6 573 aa5.37□□□□□ -1.55
SMG8-205ENST00000580798 EXOC8Q8IYI6 725 aa5.37□□□□□ -1.55
SMG8-205ENST00000580798 BVESQ8NE79 360 aa5.37□□□□□ -1.55
SMG8-205ENST00000580798 TOE1Q96GM8 510 aaKnown RBP5.37□□□□□ -1.55
SMG8-205ENST00000580798 GNRHR2Q96P88 292 aa5.37□□□□□ -1.55
SMG8-205ENST00000580798 APBA2Q99767 749 aa5.37□□□□□ -1.55
SMG8-205ENST00000580798 BARX1Q9HBU1 254 aaPredicted RBP5.37□□□□□ -1.55
SMG8-205ENST00000580798 DTLQ9NZJ0 730 aa5.37□□□□□ -1.55
SMG8-205ENST00000580798 WASF3Q9UPY6 502 aa5.37□□□□□ -1.55
SMG8-205ENST00000580798 ZNF652Q9Y2D9 606 aa5.37□□□□□ -1.55
SMG8-205ENST00000580798 NARSO43776 548 aaKnown RBP5.36□□□□□ -1.55
SMG8-205ENST00000580798 MCCP23508 829 aa5.36□□□□□ -1.55
SMG8-205ENST00000580798 NRN1LQ496H8 165 aa5.36□□□□□ -1.55
SMG8-205ENST00000580798 HS1BP3Q53T59 392 aa5.36□□□□□ -1.55
SMG8-205ENST00000580798 GTF2IRD2BQ6EKJ0 949 aa5.36□□□□□ -1.55
SMG8-205ENST00000580798 TCTN3Q6NUS6 607 aa5.36□□□□□ -1.55
SMG8-205ENST00000580798 TRMT10BQ6PF06 316 aaKnown RBP5.36□□□□□ -1.55
SMG8-205ENST00000580798 POMZP3Q6PJE2 187 aa5.36□□□□□ -1.55
SMG8-205ENST00000580798 TMED8Q6PL24 325 aaPredicted RBP5.36□□□□□ -1.55
SMG8-205ENST00000580798 TEPPQ6URK8 271 aa5.36□□□□□ -1.55
SMG8-205ENST00000580798 GTF2IRD2Q86UP8 949 aa5.36□□□□□ -1.55
SMG8-205ENST00000580798 Q8N1Y9 231 aa5.36□□□□□ -1.55
SMG8-205ENST00000580798 CRACR2BQ8N4Y2 399 aaPredicted RBP5.36□□□□□ -1.55
SMG8-205ENST00000580798 ARRDC4Q8NCT1 418 aa5.36□□□□□ -1.55
SMG8-205ENST00000580798 PPP1R14AQ96A00 147 aa5.36□□□□□ -1.55
SMG8-205ENST00000580798 ANAPC16Q96DE5 110 aa5.36□□□□□ -1.55
SMG8-205ENST00000580798 MRRFQ96E11 262 aaKnown RBP5.36□□□□□ -1.55
SMG8-205ENST00000580798 SEC16BQ96JE7 1060 aa5.36□□□□□ -1.55
SMG8-205ENST00000580798 ACBD3Q9H3P7 528 aa5.36□□□□□ -1.55
SMG8-205ENST00000580798 MYH16Q9H6N6 1097 aa5.36□□□□□ -1.55
SMG8-205ENST00000580798 ADAM29Q9UKF5 820 aa5.36□□□□□ -1.55
SMG8-205ENST00000580798 X6R8D5 127 aa5.36□□□□□ -1.55
SMG8-205ENST00000580798 PCSK5Q92824 1860 aa5.36□□□□□ -1.55
SMG8-205ENST00000580798 LRG1P02750 347 aa5.35□□□□□ -1.55
SMG8-205ENST00000580798 NAT2P11245 290 aa5.35□□□□□ -1.55
SMG8-205ENST00000580798 COL6A1P12109 1028 aa5.35□□□□□ -1.55
SMG8-205ENST00000580798 DPTQ07507 201 aa5.35□□□□□ -1.55
SMG8-205ENST00000580798 CYP4F3Q08477 520 aa5.35□□□□□ -1.55
SMG8-205ENST00000580798 USP39Q53GS9 565 aaKnown RBP5.35□□□□□ -1.55
SMG8-205ENST00000580798 CEP68Q76N32 757 aa5.35□□□□□ -1.55
SMG8-205ENST00000580798 NLRP10Q86W26 655 aa5.35□□□□□ -1.55
SMG8-205ENST00000580798 TRIM59Q8IWR1 403 aa5.35□□□□□ -1.55
SMG8-205ENST00000580798 AMER2Q8N7J2 671 aa5.35□□□□□ -1.55
SMG8-205ENST00000580798 NUDT10Q8NFP7 164 aa5.35□□□□□ -1.55
SMG8-205ENST00000580798 NPLOC4Q8TAT6 608 aa5.35□□□□□ -1.55
SMG8-205ENST00000580798 FRS2Q8WU20 508 aa5.35□□□□□ -1.55
SMG8-205ENST00000580798 NUDT11Q96G61 164 aa5.35□□□□□ -1.55
SMG8-205ENST00000580798 MRGPRX3Q96LB0 322 aa5.35□□□□□ -1.55
SMG8-205ENST00000580798 WRNIP1Q96S55 665 aa5.35□□□□□ -1.55
SMG8-205ENST00000580798 TMEM209Q96SK2 561 aa5.35□□□□□ -1.55
SMG8-205ENST00000580798 ADOQ96SZ5 270 aa5.35□□□□□ -1.55
SMG8-205ENST00000580798 SEC61A2Q9H9S3 476 aa5.35□□□□□ -1.55
SMG8-205ENST00000580798 STRIP2Q9ULQ0 834 aa5.35□□□□□ -1.55
SMG8-205ENST00000580798 NOP56O00567 594 aaKnown RBP5.34□□□□□ -1.55
SMG8-205ENST00000580798 PTMAP06454 111 aaKnown RBP5.34□□□□□ -1.55
SMG8-205ENST00000580798 ZNF143P52747 638 aaPredicted RBP5.34□□□□□ -1.55
SMG8-205ENST00000580798 NANOS3P60323 173 aaKnown RBP5.34□□□□□ -1.55
SMG8-205ENST00000580798 NCAPHQ15003 741 aa5.34□□□□□ -1.55
SMG8-205ENST00000580798 GPATCH11Q8N954 259 aa5.34□□□□□ -1.55
SMG8-205ENST00000580798 BTN2A2Q8WVV5 523 aa5.34□□□□□ -1.55
SMG8-205ENST00000580798 TRMT2BQ96GJ1 504 aaKnown RBP5.34□□□□□ -1.55
SMG8-205ENST00000580798 DNAJC2Q99543 621 aaKnown RBP5.34□□□□□ -1.55
SMG8-205ENST00000580798 TRIM8Q9BZR9 551 aa5.34□□□□□ -1.55
SMG8-205ENST00000580798 TGIF2Q9GZN2 237 aa5.34□□□□□ -1.55
SMG8-205ENST00000580798 NKX2-4Q9H2Z4 354 aa5.34□□□□□ -1.55
SMG8-205ENST00000580798 KIAA1522Q9P206 1035 aaPredicted RBP5.34□□□□□ -1.55
SMG8-205ENST00000580798 INPP5FQ9Y2H2 1132 aa5.34□□□□□ -1.55
SMG8-205ENST00000580798 TIMM13Q9Y5L4 95 aaPredicted RBP5.34□□□□□ -1.55
SMG8-205ENST00000580798 TCRBV5S2A0A599 114 aa5.33□□□□□ -1.56
SMG8-205ENST00000580798 TBX1O43435 398 aa5.33□□□□□ -1.56
SMG8-205ENST00000580798 RPL11P62913 178 aaKnown RBP5.33□□□□□ -1.56
SMG8-205ENST00000580798 PTH1RQ03431 593 aa5.33□□□□□ -1.56
SMG8-205ENST00000580798 GORABQ5T7V8 394 aa5.33□□□□□ -1.56
SMG8-205ENST00000580798 TMC5Q6UXY8 1006 aa5.33□□□□□ -1.56
SMG8-205ENST00000580798 EXTL1Q92935 676 aa5.33□□□□□ -1.56
SMG8-205ENST00000580798 CSRNP2Q9H175 543 aa5.33□□□□□ -1.56
SMG8-205ENST00000580798 CCSER2Q9H7U1 834 aa5.33□□□□□ -1.56
SMG8-205ENST00000580798 CYP26B1Q9NR63 512 aa5.33□□□□□ -1.56
SMG8-205ENST00000580798 ZFR2Q9UPR6 939 aaKnown RBP5.33□□□□□ -1.56
SMG8-205ENST00000580798 UNCXA6NJT0 531 aa5.32□□□□□ -1.56
SMG8-205ENST00000580798 B2RBV5 119 aa5.32□□□□□ -1.56
SMG8-205ENST00000580798 HGSO14964 777 aaPredicted RBP5.32□□□□□ -1.56
SMG8-205ENST00000580798 PLSCR1O15162 318 aa5.32□□□□□ -1.56
SMG8-205ENST00000580798 KLHL18O94889 574 aa5.32□□□□□ -1.56
SMG8-205ENST00000580798 MCM7P33993 719 aa5.32□□□□□ -1.56
SMG8-205ENST00000580798 BCL6P41182 706 aa5.32□□□□□ -1.56
SMG8-205ENST00000580798 DGCR2P98153 550 aa5.32□□□□□ -1.56
SMG8-205ENST00000580798 LSM12Q3MHD2 195 aaKnown RBP5.32□□□□□ -1.56
SMG8-205ENST00000580798 RALYLQ86SE5 291 aaKnown RBP5.32□□□□□ -1.56
SMG8-205ENST00000580798 CCDC103Q8IW40 242 aa5.32□□□□□ -1.56
SMG8-205ENST00000580798 LMF1Q96S06 567 aa5.32□□□□□ -1.56
SMG8-205ENST00000580798 RBPJLQ9UBG7 517 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms