RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 POLR3KQ9Y2Y1 108 aaPredicted RBP4.14□□□□□ -1.75
KPNB1-208ENST00000580019 MASP2O00187 686 aa4.13□□□□□ -1.75
KPNB1-208ENST00000580019 COMTP21964 271 aa4.13□□□□□ -1.75
KPNB1-208ENST00000580019 AMPD3Q01432 767 aa4.13□□□□□ -1.75
KPNB1-208ENST00000580019 COL10A1Q03692 680 aa4.13□□□□□ -1.75
KPNB1-208ENST00000580019 BIRC2Q13490 618 aa4.13□□□□□ -1.75
KPNB1-208ENST00000580019 PWP1Q13610 501 aa4.13□□□□□ -1.75
KPNB1-208ENST00000580019 RAB33AQ14088 237 aa4.13□□□□□ -1.75
KPNB1-208ENST00000580019 FNDC7Q5VTL7 733 aa4.13□□□□□ -1.75
KPNB1-208ENST00000580019 AGBL4Q5VU57 503 aa4.13□□□□□ -1.75
KPNB1-208ENST00000580019 PAPD7Q5XG87 772 aaKnown RBP4.13□□□□□ -1.75
KPNB1-208ENST00000580019 HOMER1Q86YM7 354 aa4.13□□□□□ -1.75
KPNB1-208ENST00000580019 JDP2Q8WYK2 163 aa4.13□□□□□ -1.75
KPNB1-208ENST00000580019 DEPDC7Q96QD5 511 aa4.13□□□□□ -1.75
KPNB1-208ENST00000580019 SPON2Q9BUD6 331 aa4.13□□□□□ -1.75
KPNB1-208ENST00000580019 MKRN2Q9H000 416 aaKnown RBP4.13□□□□□ -1.75
KPNB1-208ENST00000580019 FANCLQ9NW38 375 aa4.13□□□□□ -1.75
KPNB1-208ENST00000580019 GABBR1Q9UBS5 961 aa4.13□□□□□ -1.75
KPNB1-208ENST00000580019 TCEAL9Q9UHQ7 104 aa4.13□□□□□ -1.75
KPNB1-208ENST00000580019 TLR6Q9Y2C9 796 aa4.13□□□□□ -1.75
KPNB1-208ENST00000580019 PRC1O43663 620 aa4.12□□□□□ -1.75
KPNB1-208ENST00000580019 CREB3O43889 395 aa4.12□□□□□ -1.75
KPNB1-208ENST00000580019 ADRA1BP35368 520 aa4.12□□□□□ -1.75
KPNB1-208ENST00000580019 NOP2P46087 812 aaKnown RBP4.12□□□□□ -1.75
KPNB1-208ENST00000580019 NASPP49321 788 aaPredicted RBP4.12□□□□□ -1.75
KPNB1-208ENST00000580019 C21orf58P58505 322 aa4.12□□□□□ -1.75
KPNB1-208ENST00000580019 COL9A2Q14055 689 aaPredicted RBP4.12□□□□□ -1.75
KPNB1-208ENST00000580019 RALBP1Q15311 655 aa4.12□□□□□ -1.75
KPNB1-208ENST00000580019 HSP90AB4PQ58FF6 505 aa4.12□□□□□ -1.75
KPNB1-208ENST00000580019 ODR4Q5SWX8 454 aa4.12□□□□□ -1.75
KPNB1-208ENST00000580019 ERMP1Q7Z2K6 904 aa4.12□□□□□ -1.75
KPNB1-208ENST00000580019 KIAA0825Q8IV33 1275 aa4.12□□□□□ -1.75
KPNB1-208ENST00000580019 GIMAP8Q8ND71 665 aaPredicted RBP4.12□□□□□ -1.75
KPNB1-208ENST00000580019 SH3TC2Q8TF17 1288 aa4.12□□□□□ -1.75
KPNB1-208ENST00000580019 CPLX3Q8WVH0 158 aa4.12□□□□□ -1.75
KPNB1-208ENST00000580019 STAG1Q8WVM7 1258 aa4.12□□□□□ -1.75
KPNB1-208ENST00000580019 GATAD2BQ8WXI9 593 aa4.12□□□□□ -1.75
KPNB1-208ENST00000580019 CCDC113Q9H0I3 377 aa4.12□□□□□ -1.75
KPNB1-208ENST00000580019 BARX1Q9HBU1 254 aaPredicted RBP4.12□□□□□ -1.75
KPNB1-208ENST00000580019 SNTG2Q9NY99 539 aa4.12□□□□□ -1.75
KPNB1-208ENST00000580019 KLF4O43474 513 aa4.11□□□□□ -1.75
KPNB1-208ENST00000580019 CNOT4O95628 575 aaKnown RBP4.11□□□□□ -1.75
KPNB1-208ENST00000580019 CDK4P11802 303 aa4.11□□□□□ -1.75
KPNB1-208ENST00000580019 ETFBP38117 255 aa4.11□□□□□ -1.75
KPNB1-208ENST00000580019 GYS2P54840 703 aa4.11□□□□□ -1.75
KPNB1-208ENST00000580019 TBX4P57082 545 aa4.11□□□□□ -1.75
KPNB1-208ENST00000580019 IFRD2Q12894 506 aaPredicted RBP4.11□□□□□ -1.75
KPNB1-208ENST00000580019 NFATC3Q12968 1075 aa4.11□□□□□ -1.75
KPNB1-208ENST00000580019 AUHQ13825 339 aaKnown RBP4.11□□□□□ -1.75
KPNB1-208ENST00000580019 MEI1Q5TIA1 1274 aa4.11□□□□□ -1.75
KPNB1-208ENST00000580019 WWC2Q6AWC2 1192 aa4.11□□□□□ -1.75
KPNB1-208ENST00000580019 MIB1Q86YT6 1006 aa4.11□□□□□ -1.75
KPNB1-208ENST00000580019 RELL1Q8IUW5 271 aa4.11□□□□□ -1.75
KPNB1-208ENST00000580019 TTPALQ9BTX7 342 aa4.11□□□□□ -1.75
KPNB1-208ENST00000580019 RSRP1Q9BUV0 290 aa4.11□□□□□ -1.75
KPNB1-208ENST00000580019 NOC4LQ9BVI4 516 aaKnown RBP4.11□□□□□ -1.75
KPNB1-208ENST00000580019 HOMER2Q9NSB8 354 aa4.11□□□□□ -1.75
KPNB1-208ENST00000580019 FBLN5Q9UBX5 448 aa4.11□□□□□ -1.75
KPNB1-208ENST00000580019 ZDHHC9Q9Y397 364 aa4.11□□□□□ -1.75
KPNB1-208ENST00000580019 RWDD3Q9Y3V2 267 aa4.11□□□□□ -1.75
KPNB1-208ENST00000580019 CYP7B1O75881 506 aa4.1□□□□□ -1.75
KPNB1-208ENST00000580019 CTGFP29279 349 aa4.1□□□□□ -1.75
KPNB1-208ENST00000580019 POLR2BP30876 1174 aaKnown RBP4.1□□□□□ -1.75
KPNB1-208ENST00000580019 CCNFP41002 786 aa4.1□□□□□ -1.75
KPNB1-208ENST00000580019 MASP1P48740 699 aa4.1□□□□□ -1.75
KPNB1-208ENST00000580019 OS9Q13438 667 aaPredicted RBP4.1□□□□□ -1.75
KPNB1-208ENST00000580019 ADAM9Q13443 819 aa4.1□□□□□ -1.75
KPNB1-208ENST00000580019 RASA3Q14644 834 aa4.1□□□□□ -1.75
KPNB1-208ENST00000580019 TSHZ1Q6ZSZ6 1077 aa4.1□□□□□ -1.75
KPNB1-208ENST00000580019 APBB1IPQ7Z5R6 666 aaPredicted RBP4.1□□□□□ -1.75
KPNB1-208ENST00000580019 KIAA0907Q7Z7F0 614 aaPredicted RBP4.1□□□□□ -1.75
KPNB1-208ENST00000580019 ULK2Q8IYT8 1036 aa4.1□□□□□ -1.75
KPNB1-208ENST00000580019 PHC3Q8NDX5 983 aa4.1□□□□□ -1.75
KPNB1-208ENST00000580019 IL17DQ8TAD2 202 aa4.1□□□□□ -1.75
KPNB1-208ENST00000580019 C8orf48Q96LL4 319 aa4.1□□□□□ -1.75
KPNB1-208ENST00000580019 LMF1Q96S06 567 aa4.1□□□□□ -1.75
KPNB1-208ENST00000580019 NGRNQ9NPE2 291 aaKnown RBP4.1□□□□□ -1.75
KPNB1-208ENST00000580019 COPRSQ9NQ92 184 aa4.1□□□□□ -1.75
KPNB1-208ENST00000580019 SLC2A4RGQ9NR83 387 aa4.1□□□□□ -1.75
KPNB1-208ENST00000580019 KBTBD4Q9NVX7 518 aa4.1□□□□□ -1.75
KPNB1-208ENST00000580019 FTSJ1Q9UET6 329 aa4.1□□□□□ -1.75
KPNB1-208ENST00000580019 PRKAG3Q9UGI9 489 aa4.1□□□□□ -1.75
KPNB1-208ENST00000580019 EFR3BQ9Y2G0 817 aa4.1□□□□□ -1.75
KPNB1-208ENST00000580019 MRVI1Q9Y6F6 885 aa4.1□□□□□ -1.75
KPNB1-208ENST00000580019 A0A0A6YYK5 440 aaPredicted RBP4.09□□□□□ -1.75
KPNB1-208ENST00000580019 FAM221BA6H8Z2 402 aa4.09□□□□□ -1.75
KPNB1-208ENST00000580019 KIF3BO15066 747 aa4.09□□□□□ -1.75
KPNB1-208ENST00000580019 FOXN1O15353 648 aa4.09□□□□□ -1.75
KPNB1-208ENST00000580019 F13A1P00488 732 aa4.09□□□□□ -1.75
KPNB1-208ENST00000580019 ACO1P21399 889 aaKnown RBP4.09□□□□□ -1.75
KPNB1-208ENST00000580019 RHBDL3P58872 404 aa4.09□□□□□ -1.75
KPNB1-208ENST00000580019 TNNI3KQ59H18 835 aa4.09□□□□□ -1.75
KPNB1-208ENST00000580019 CCSAPQ6IQ19 270 aaPredicted RBP4.09□□□□□ -1.75
KPNB1-208ENST00000580019 C16orf86Q6ZW13 317 aa4.09□□□□□ -1.75
KPNB1-208ENST00000580019 CLIP3Q96DZ5 547 aa4.09□□□□□ -1.75
KPNB1-208ENST00000580019 RPS6KC1Q96S38 1066 aa4.09□□□□□ -1.75
KPNB1-208ENST00000580019 FEZ1Q99689 392 aa4.09□□□□□ -1.75
KPNB1-208ENST00000580019 GMIPQ9P107 970 aa4.09□□□□□ -1.75
KPNB1-208ENST00000580019 ESYT3A0FGR9 886 aa4.08□□□□□ -1.76
KPNB1-208ENST00000580019 RIMBP3CA6NJZ7 1639 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms