RNA–Protein interactions for RNA: ENST00000579986.6

RTTN-204, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,079 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-204ENST00000579986 DHX40Q8IX18 779 aaKnown RBP7.18□□□□□ -1.26
RTTN-204ENST00000579986 CKAP2LQ8IYA6 745 aa7.18□□□□□ -1.26
RTTN-204ENST00000579986 GPRC5AQ8NFJ5 357 aa7.18□□□□□ -1.26
RTTN-204ENST00000579986 DHX58Q96C10 678 aa7.18□□□□□ -1.26
RTTN-204ENST00000579986 PARK7Q99497 189 aaKnown RBP7.18□□□□□ -1.26
RTTN-204ENST00000579986 SDF4Q9BRK5 362 aa7.18□□□□□ -1.26
RTTN-204ENST00000579986 CTDP1Q9Y5B0 961 aaPredicted RBP7.18□□□□□ -1.26
RTTN-204ENST00000579986 IPO5O00410 1097 aaKnown RBP7.17□□□□□ -1.26
RTTN-204ENST00000579986 EML1O00423 815 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 IKBKBO14920 756 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 STRNO43815 780 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 MED24O75448 989 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 EIF3JO75822 258 aaKnown RBP7.17□□□□□ -1.26
RTTN-204ENST00000579986 RHOBTB3O94955 611 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 GRB14Q14449 540 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 NCAPHQ15003 741 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 ARHGEF16Q5VV41 709 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 MAMDC4Q6UXC1 1216 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 C11orf57Q6ZUT1 292 aaPredicted RBP7.17□□□□□ -1.26
RTTN-204ENST00000579986 CEP57L1Q8IYX8 460 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 USP6NLQ92738 828 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 KCNN1Q92952 543 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 ZNF577Q9BSK1 485 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 TRIM9Q9C026 710 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 HSD3B7Q9H2F3 369 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 UNC45AQ9H3U1 944 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 SIP14410 1827 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 IGKV6D-21A0A0A0MT36 114 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 PVALEFA0A1B0GWK0 134 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 IGF2BP3O00425 579 aaKnown RBP eCLIP7.17□□□□□ -1.26
RTTN-204ENST00000579986 TOMM70O94826 608 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 SLITRK3O94933 977 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 CDC25AP30304 524 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 STAT6P42226 847 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 HUNKP57058 714 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 MTMR1Q13613 665 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 CUL4BQ13620 913 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 KRT79Q5XKE5 535 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 HAUS3Q68CZ6 603 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 SASS6Q6UVJ0 657 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 C17orf99Q6UX52 265 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 KCNK18Q7Z418 384 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 IFNL1Q8IU54 200 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 REM2Q8IYK8 340 aaPredicted RBP7.17□□□□□ -1.26
RTTN-204ENST00000579986 GJA10Q969M2 543 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 CCDC102AQ96A19 550 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 DNAJC19Q96DA6 116 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 CALML4Q96GE6 196 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 CDHR1Q96JP9 859 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 PDLIM2Q96JY6 352 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 PURBQ96QR8 312 aaKnown RBP7.17□□□□□ -1.26
RTTN-204ENST00000579986 KATNBL1Q9H079 304 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 HOMER2Q9NSB8 354 aa7.17□□□□□ -1.26
RTTN-204ENST00000579986 RASSF10A6NK89 507 aa7.16□□□□□ -1.26
RTTN-204ENST00000579986 STBD1O95210 358 aa7.16□□□□□ -1.26
RTTN-204ENST00000579986 SMC2O95347 1197 aa7.16□□□□□ -1.26
RTTN-204ENST00000579986 TGFB3P10600 412 aa7.16□□□□□ -1.26
RTTN-204ENST00000579986 CYP2C8P10632 490 aa7.16□□□□□ -1.26
RTTN-204ENST00000579986 ERCC5P28715 1186 aaPredicted RBP7.16□□□□□ -1.26
RTTN-204ENST00000579986 DPCR1Q3MIW9 517 aa7.16□□□□□ -1.26
RTTN-204ENST00000579986 ANO6Q4KMQ2 910 aa7.16□□□□□ -1.26
RTTN-204ENST00000579986 MORN1Q5T089 497 aa7.16□□□□□ -1.26
RTTN-204ENST00000579986 LRCH2Q5VUJ6 765 aa7.16□□□□□ -1.26
RTTN-204ENST00000579986 ZNF746Q6NUN9 644 aaPredicted RBP7.16□□□□□ -1.26
RTTN-204ENST00000579986 SARM1Q6SZW1 724 aa7.16□□□□□ -1.26
RTTN-204ENST00000579986 MSL3Q8N5Y2 521 aaKnown RBP7.16□□□□□ -1.26
RTTN-204ENST00000579986 SYT2Q8N9I0 419 aaPredicted RBP7.16□□□□□ -1.26
RTTN-204ENST00000579986 MLKLQ8NB16 471 aa7.16□□□□□ -1.26
RTTN-204ENST00000579986 ERMNQ8TAM6 284 aa7.16□□□□□ -1.26
RTTN-204ENST00000579986 CCDC34Q96HJ3 373 aa7.16□□□□□ -1.26
RTTN-204ENST00000579986 MED15Q96RN5 788 aa7.16□□□□□ -1.26
RTTN-204ENST00000579986 PPP1R9BQ96SB3 815 aa7.16□□□□□ -1.26
RTTN-204ENST00000579986 EIF2AK1Q9BQI3 630 aaKnown RBP7.16□□□□□ -1.26
RTTN-204ENST00000579986 TEKT3Q9BXF9 490 aa7.16□□□□□ -1.26
RTTN-204ENST00000579986 LRRC27Q9C0I9 530 aa7.16□□□□□ -1.26
RTTN-204ENST00000579986 CBX8Q9HC52 389 aa7.16□□□□□ -1.26
RTTN-204ENST00000579986 KCND2Q9NZV8 630 aa7.16□□□□□ -1.26
RTTN-204ENST00000579986 PCDHA2Q9Y5H9 948 aa7.16□□□□□ -1.26
RTTN-204ENST00000579986 TMEM88BA6NKF7 163 aa7.16□□□□□ -1.26
RTTN-204ENST00000579986 PPP1R3GB7ZBB8 358 aa7.16□□□□□ -1.26
RTTN-204ENST00000579986 PEX10O60683 326 aa7.16□□□□□ -1.26
RTTN-204ENST00000579986 EIF2AK2P19525 551 aaKnown RBP7.16□□□□□ -1.26
RTTN-204ENST00000579986 SFNP31947 248 aa7.16□□□□□ -1.26
RTTN-204ENST00000579986 NSMFQ6X4W1 530 aa7.16□□□□□ -1.26
RTTN-204ENST00000579986 NLRX1Q86UT6 975 aa7.16□□□□□ -1.26
RTTN-204ENST00000579986 GRAMD1CQ8IYS0 662 aa7.16□□□□□ -1.26
RTTN-204ENST00000579986 GIMAP8Q8ND71 665 aaPredicted RBP7.16□□□□□ -1.26
RTTN-204ENST00000579986 SNX29Q8TEQ0 813 aa7.16□□□□□ -1.26
RTTN-204ENST00000579986 LARP4BQ92615 738 aaKnown RBP7.16□□□□□ -1.26
RTTN-204ENST00000579986 SMARCE1Q969G3 411 aa7.16□□□□□ -1.26
RTTN-204ENST00000579986 ZNF408Q9H9D4 720 aa7.16□□□□□ -1.26
RTTN-204ENST00000579986 GPBP1L1Q9HC44 474 aaPredicted RBP7.16□□□□□ -1.26
RTTN-204ENST00000579986 ADD3Q9UEY8 706 aaKnown RBP7.16□□□□□ -1.26
RTTN-204ENST00000579986 DBR1Q9UK59 544 aaKnown RBP7.16□□□□□ -1.26
RTTN-204ENST00000579986 DOCK5Q9H7D0 1870 aa7.16□□□□□ -1.26
RTTN-204ENST00000579986 ATP9AO75110 1047 aa7.16□□□□□ -1.26
RTTN-204ENST00000579986 CCNE2O96020 404 aa7.16□□□□□ -1.26
RTTN-204ENST00000579986 RPN1P04843 607 aaKnown RBP7.16□□□□□ -1.26
RTTN-204ENST00000579986 HOXC6P09630 235 aa7.16□□□□□ -1.26
RTTN-204ENST00000579986 ZNF76P36508 570 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms