RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 PTPN21Q16825 1174 aa15.48■□□□□ 0.07
CDK5RAP3-213ENST00000579605 SIRT2Q8IXJ6 389 aa15.48■□□□□ 0.07
CDK5RAP3-213ENST00000579605 MIER1Q8N108 512 aa15.48■□□□□ 0.07
CDK5RAP3-213ENST00000579605 KMT2EQ8IZD2 1858 aa15.48■□□□□ 0.07
CDK5RAP3-213ENST00000579605 MICAL3Q7RTP6 2002 aa15.48■□□□□ 0.07
CDK5RAP3-213ENST00000579605 ADGRA3Q8IWK6 1321 aa15.47■□□□□ 0.07
CDK5RAP3-213ENST00000579605 PPFIA4O75335 1185 aa15.47■□□□□ 0.07
CDK5RAP3-213ENST00000579605 EIF2AK2P19525 551 aaKnown RBP15.47■□□□□ 0.07
CDK5RAP3-213ENST00000579605 ARHGEF16Q5VV41 709 aa15.47■□□□□ 0.07
CDK5RAP3-213ENST00000579605 TSHZ3Q63HK5 1081 aa15.47■□□□□ 0.07
CDK5RAP3-213ENST00000579605 SYTL5Q8TDW5 730 aaPredicted RBP15.47■□□□□ 0.07
CDK5RAP3-213ENST00000579605 APBB2Q92870 758 aa15.47■□□□□ 0.07
CDK5RAP3-213ENST00000579605 CLP1Q92989 425 aaKnown RBP15.47■□□□□ 0.07
CDK5RAP3-213ENST00000579605 EMID1Q96A84 441 aaPredicted RBP15.47■□□□□ 0.07
CDK5RAP3-213ENST00000579605 SPATA33Q96N06 139 aa15.47■□□□□ 0.07
CDK5RAP3-213ENST00000579605 RMDN3Q96TC7 470 aa15.47■□□□□ 0.07
CDK5RAP3-213ENST00000579605 TMEM47Q9BQJ4 181 aa15.47■□□□□ 0.07
CDK5RAP3-213ENST00000579605 TOMM22Q9NS69 142 aa15.47■□□□□ 0.07
CDK5RAP3-213ENST00000579605 COL20A1Q9P218 1284 aa15.47■□□□□ 0.07
CDK5RAP3-213ENST00000579605 PNMA2Q9UL42 364 aa15.47■□□□□ 0.07
CDK5RAP3-213ENST00000579605 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.47■□□□□ 0.07
CDK5RAP3-213ENST00000579605 PCDHGC5Q9Y5F6 944 aa15.47■□□□□ 0.07
CDK5RAP3-213ENST00000579605 CACNA1HO95180 2353 aa15.46■□□□□ 0.07
CDK5RAP3-213ENST00000579605 PER2O15055 1255 aa15.46■□□□□ 0.07
CDK5RAP3-213ENST00000579605 PPFIA3O75145 1194 aa15.46■□□□□ 0.07
CDK5RAP3-213ENST00000579605 GLP2RO95838 553 aa15.46■□□□□ 0.07
CDK5RAP3-213ENST00000579605 ITGB1P05556 798 aa15.46■□□□□ 0.07
CDK5RAP3-213ENST00000579605 ZFYP08048 801 aaPredicted RBP15.46■□□□□ 0.07
CDK5RAP3-213ENST00000579605 SMIM10L2AP0DMW4 78 aa15.46■□□□□ 0.07
CDK5RAP3-213ENST00000579605 SMIM10L2BP0DMW5 78 aa15.46■□□□□ 0.07
CDK5RAP3-213ENST00000579605 NUBP1P53384 320 aa15.46■□□□□ 0.07
CDK5RAP3-213ENST00000579605 RBM10P98175 930 aaKnown RBP15.46■□□□□ 0.07
CDK5RAP3-213ENST00000579605 HSDL1Q3SXM5 330 aa15.46■□□□□ 0.07
CDK5RAP3-213ENST00000579605 TMEM105Q8N8V8 129 aa15.46■□□□□ 0.07
CDK5RAP3-213ENST00000579605 RGS22Q8NE09 1264 aa15.46■□□□□ 0.07
CDK5RAP3-213ENST00000579605 SPPL3Q8TCT6 385 aa15.46■□□□□ 0.07
CDK5RAP3-213ENST00000579605 POF1BQ8WVV4 589 aa15.46■□□□□ 0.07
CDK5RAP3-213ENST00000579605 IWS1Q96ST2 819 aa15.46■□□□□ 0.07
CDK5RAP3-213ENST00000579605 RNPEPQ9H4A4 650 aa15.46■□□□□ 0.07
CDK5RAP3-213ENST00000579605 ECHDC1Q9NTX5 307 aa15.46■□□□□ 0.07
CDK5RAP3-213ENST00000579605 PLXNA3P51805 1871 aa15.46■□□□□ 0.06
CDK5RAP3-213ENST00000579605 WDR19Q8NEZ3 1342 aa15.45■□□□□ 0.06
CDK5RAP3-213ENST00000579605 EIF3JO75822 258 aaKnown RBP15.45■□□□□ 0.06
CDK5RAP3-213ENST00000579605 TOP1P11387 765 aaKnown RBP15.45■□□□□ 0.06
CDK5RAP3-213ENST00000579605 RRP12Q5JTH9 1297 aaKnown RBP15.45■□□□□ 0.06
CDK5RAP3-213ENST00000579605 MYSM1Q5VVJ2 828 aa15.45■□□□□ 0.06
CDK5RAP3-213ENST00000579605 MICAL1Q8TDZ2 1067 aa15.45■□□□□ 0.06
CDK5RAP3-213ENST00000579605 PLVAPQ9BX97 442 aa15.45■□□□□ 0.06
CDK5RAP3-213ENST00000579605 UBA5Q9GZZ9 404 aa15.45■□□□□ 0.06
CDK5RAP3-213ENST00000579605 CPVLQ9H3G5 476 aa15.45■□□□□ 0.06
CDK5RAP3-213ENST00000579605 TLE6Q9H808 572 aa15.45■□□□□ 0.06
CDK5RAP3-213ENST00000579605 SETD4Q9NVD3 440 aa15.45■□□□□ 0.06
CDK5RAP3-213ENST00000579605 DCHS1Q96JQ0 3298 aa15.44■□□□□ 0.06
CDK5RAP3-213ENST00000579605 ENPP3O14638 875 aa15.44■□□□□ 0.06
CDK5RAP3-213ENST00000579605 GGPS1O95749 300 aa15.44■□□□□ 0.06
CDK5RAP3-213ENST00000579605 NR3C2P08235 984 aa15.44■□□□□ 0.06
CDK5RAP3-213ENST00000579605 GOLGA8HP0CJ92 632 aa15.44■□□□□ 0.06
CDK5RAP3-213ENST00000579605 GHRP10912 638 aa15.44■□□□□ 0.06
CDK5RAP3-213ENST00000579605 PDHBP11177 359 aa15.44■□□□□ 0.06
CDK5RAP3-213ENST00000579605 MS4A1P11836 297 aa15.44■□□□□ 0.06
CDK5RAP3-213ENST00000579605 MYCLP12524 364 aaPredicted RBP15.44■□□□□ 0.06
CDK5RAP3-213ENST00000579605 KLHL23Q8NBE8 558 aa15.44■□□□□ 0.06
CDK5RAP3-213ENST00000579605 KREMEN2Q8NCW0 462 aa15.44■□□□□ 0.06
CDK5RAP3-213ENST00000579605 C16orf70Q9BSU1 422 aa15.44■□□□□ 0.06
CDK5RAP3-213ENST00000579605 APOL5Q9BWW9 433 aa15.44■□□□□ 0.06
CDK5RAP3-213ENST00000579605 LRRCC1Q9C099 1032 aa15.44■□□□□ 0.06
CDK5RAP3-213ENST00000579605 MRPL42Q9Y6G3 142 aaKnown RBP15.44■□□□□ 0.06
CDK5RAP3-213ENST00000579605 H3BRB1 525 aa15.43■□□□□ 0.06
CDK5RAP3-213ENST00000579605 NOVP48745 357 aa15.43■□□□□ 0.06
CDK5RAP3-213ENST00000579605 ZNF543Q08ER8 600 aa15.43■□□□□ 0.06
CDK5RAP3-213ENST00000579605 PAN2Q504Q3 1202 aaKnown RBP15.43■□□□□ 0.06
CDK5RAP3-213ENST00000579605 CELF3Q5SZQ8 465 aaKnown RBP15.43■□□□□ 0.06
CDK5RAP3-213ENST00000579605 DIEXFQ68CQ4 756 aaKnown RBP15.43■□□□□ 0.06
CDK5RAP3-213ENST00000579605 DGLUCYQ7Z3D6 616 aa15.43■□□□□ 0.06
CDK5RAP3-213ENST00000579605 ZNF689Q96CS4 500 aaPredicted RBP15.43■□□□□ 0.06
CDK5RAP3-213ENST00000579605 ZFP91Q96JP5 570 aaPredicted RBP15.43■□□□□ 0.06
CDK5RAP3-213ENST00000579605 TUT1Q9H6E5 874 aaKnown RBP15.43■□□□□ 0.06
CDK5RAP3-213ENST00000579605 MLXIPQ9HAP2 919 aa15.43■□□□□ 0.06
CDK5RAP3-213ENST00000579605 TSHZ2Q9NRE2 1034 aa15.43■□□□□ 0.06
CDK5RAP3-213ENST00000579605 SUPT16HQ9Y5B9 1047 aaKnown RBP15.43■□□□□ 0.06
CDK5RAP3-213ENST00000579605 HOXD8P13378 290 aaPredicted RBP15.42■□□□□ 0.06
CDK5RAP3-213ENST00000579605 ATF7P17544 494 aaPredicted RBP15.42■□□□□ 0.06
CDK5RAP3-213ENST00000579605 P2RX5Q93086 422 aa15.42■□□□□ 0.06
CDK5RAP3-213ENST00000579605 RMDN1Q96DB5 314 aa15.42■□□□□ 0.06
CDK5RAP3-213ENST00000579605 RC3H2Q9HBD1 1191 aaKnown RBP15.42■□□□□ 0.06
CDK5RAP3-213ENST00000579605 NLRC5Q86WI3 1866 aa15.42■□□□□ 0.06
CDK5RAP3-213ENST00000579605 RIF1Q5UIP0 2472 aaKnown RBP15.41■□□□□ 0.06
CDK5RAP3-213ENST00000579605 CAND2O75155 1236 aa15.41■□□□□ 0.06
CDK5RAP3-213ENST00000579605 DGKIO75912 1065 aa15.41■□□□□ 0.06
CDK5RAP3-213ENST00000579605 CHRNA1P02708 482 aa15.41■□□□□ 0.06
CDK5RAP3-213ENST00000579605 IBSPP21815 317 aaPredicted RBP15.41■□□□□ 0.06
CDK5RAP3-213ENST00000579605 ARHGAP4P98171 946 aa15.41■□□□□ 0.06
CDK5RAP3-213ENST00000579605 SP2Q02086 613 aa15.41■□□□□ 0.06
CDK5RAP3-213ENST00000579605 MCTP2Q6DN12 878 aa15.41■□□□□ 0.06
CDK5RAP3-213ENST00000579605 MCF2L2Q86YR7 1114 aa15.41■□□□□ 0.06
CDK5RAP3-213ENST00000579605 VN1R2Q8NFZ6 395 aa15.41■□□□□ 0.06
CDK5RAP3-213ENST00000579605 KCNG4Q8TDN1 519 aa15.41■□□□□ 0.06
CDK5RAP3-213ENST00000579605 SUSD6Q92537 303 aa15.41■□□□□ 0.06
CDK5RAP3-213ENST00000579605 MFSD1Q9H3U5 465 aa15.41■□□□□ 0.06
CDK5RAP3-213ENST00000579605 SMOC2Q9H3U7 446 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms