RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 PDGFBP01127 241 aaPredicted RBP13.14□□□□□ -0.31
SUPT4H1-203ENST00000579289 TOP1P11387 765 aaKnown RBP13.14□□□□□ -0.31
SUPT4H1-203ENST00000579289 GHRHRQ02643 423 aa13.14□□□□□ -0.31
SUPT4H1-203ENST00000579289 CCDC96Q2M329 555 aa13.14□□□□□ -0.31
SUPT4H1-203ENST00000579289 PPP4R3BQ5MIZ7 849 aa13.14□□□□□ -0.31
SUPT4H1-203ENST00000579289 C20orf194Q5TEA3 1177 aa13.14□□□□□ -0.31
SUPT4H1-203ENST00000579289 PI4K2BQ8TCG2 481 aa13.14□□□□□ -0.31
SUPT4H1-203ENST00000579289 SUSD6Q92537 303 aa13.14□□□□□ -0.31
SUPT4H1-203ENST00000579289 IWS1Q96ST2 819 aa13.14□□□□□ -0.31
SUPT4H1-203ENST00000579289 LRRCC1Q9C099 1032 aa13.14□□□□□ -0.31
SUPT4H1-203ENST00000579289 MAF1Q9H063 256 aa13.14□□□□□ -0.31
SUPT4H1-203ENST00000579289 NAPBQ9H115 298 aa13.14□□□□□ -0.31
SUPT4H1-203ENST00000579289 RNPEPQ9H4A4 650 aa13.14□□□□□ -0.31
SUPT4H1-203ENST00000579289 DDX19BQ9UMR2 479 aa13.14□□□□□ -0.31
SUPT4H1-203ENST00000579289 TELO2Q9Y4R8 837 aa13.14□□□□□ -0.31
SUPT4H1-203ENST00000579289 FAM186AA6NE01 2351 aa13.14□□□□□ -0.31
SUPT4H1-203ENST00000579289 PRR23AA6NEV1 266 aa13.13□□□□□ -0.31
SUPT4H1-203ENST00000579289 H0Y858 1186 aa13.13□□□□□ -0.31
SUPT4H1-203ENST00000579289 HMMRO75330 724 aa13.13□□□□□ -0.31
SUPT4H1-203ENST00000579289 SIGLEC14Q08ET2 396 aa13.13□□□□□ -0.31
SUPT4H1-203ENST00000579289 LAMC2Q13753 1193 aa13.13□□□□□ -0.31
SUPT4H1-203ENST00000579289 VN1R2Q8NFZ6 395 aa13.13□□□□□ -0.31
SUPT4H1-203ENST00000579289 SPPL3Q8TCT6 385 aa13.13□□□□□ -0.31
SUPT4H1-203ENST00000579289 LINC01599Q8WXQ3 324 aa13.13□□□□□ -0.31
SUPT4H1-203ENST00000579289 GPKOWQ92917 476 aaPredicted RBP eCLIP13.13□□□□□ -0.31
SUPT4H1-203ENST00000579289 IL17RAQ96F46 866 aa13.13□□□□□ -0.31
SUPT4H1-203ENST00000579289 YTHDC1Q96MU7 727 aaKnown RBP13.13□□□□□ -0.31
SUPT4H1-203ENST00000579289 KATNAL1Q9BW62 490 aa13.13□□□□□ -0.31
SUPT4H1-203ENST00000579289 IFIH1Q9BYX4 1025 aaKnown RBP13.13□□□□□ -0.31
SUPT4H1-203ENST00000579289 EHMT1Q9H9B1 1298 aa13.13□□□□□ -0.31
SUPT4H1-203ENST00000579289 TLR9Q9NR96 1032 aa13.13□□□□□ -0.31
SUPT4H1-203ENST00000579289 PLAGL2Q9UPG8 496 aa13.13□□□□□ -0.31
SUPT4H1-203ENST00000579289 KMT2BQ9UMN6 2715 aaPredicted RBP13.13□□□□□ -0.31
SUPT4H1-203ENST00000579289 TTC3P53804 2025 aa13.13□□□□□ -0.31
SUPT4H1-203ENST00000579289 EIF3JO75822 258 aaKnown RBP13.12□□□□□ -0.31
SUPT4H1-203ENST00000579289 ARP10275 920 aa13.12□□□□□ -0.31
SUPT4H1-203ENST00000579289 CTNNB1P35222 781 aa13.12□□□□□ -0.31
SUPT4H1-203ENST00000579289 NBL1P41271 181 aa13.12□□□□□ -0.31
SUPT4H1-203ENST00000579289 RBM10P98175 930 aaKnown RBP13.12□□□□□ -0.31
SUPT4H1-203ENST00000579289 KCNC3Q14003 757 aa13.12□□□□□ -0.31
SUPT4H1-203ENST00000579289 STXBP2Q15833 593 aa13.12□□□□□ -0.31
SUPT4H1-203ENST00000579289 CELF3Q5SZQ8 465 aaKnown RBP13.12□□□□□ -0.31
SUPT4H1-203ENST00000579289 FIBCD1Q8N539 461 aa13.12□□□□□ -0.31
SUPT4H1-203ENST00000579289 EFHBQ8N7U6 833 aa13.12□□□□□ -0.31
SUPT4H1-203ENST00000579289 NSUN6Q8TEA1 469 aaKnown RBP13.12□□□□□ -0.31
SUPT4H1-203ENST00000579289 SEPT8Q92599 483 aa13.12□□□□□ -0.31
SUPT4H1-203ENST00000579289 FSD1Q9BTV5 496 aa13.12□□□□□ -0.31
SUPT4H1-203ENST00000579289 IGFLR1Q9H665 355 aa13.12□□□□□ -0.31
SUPT4H1-203ENST00000579289 PNMA2Q9UL42 364 aa13.12□□□□□ -0.31
SUPT4H1-203ENST00000579289 PCDHGC5Q9Y5F6 944 aa13.12□□□□□ -0.31
SUPT4H1-203ENST00000579289 ADGRA3Q8IWK6 1321 aa13.12□□□□□ -0.31
SUPT4H1-203ENST00000579289 RANBP6O60518 1105 aaKnown RBP13.11□□□□□ -0.31
SUPT4H1-203ENST00000579289 CAND2O75155 1236 aa13.11□□□□□ -0.31
SUPT4H1-203ENST00000579289 CHRNA1P02708 482 aa13.11□□□□□ -0.31
SUPT4H1-203ENST00000579289 NR3C2P08235 984 aa13.11□□□□□ -0.31
SUPT4H1-203ENST00000579289 ICAM3P32942 547 aa13.11□□□□□ -0.31
SUPT4H1-203ENST00000579289 MGAT3Q09327 533 aa13.11□□□□□ -0.31
SUPT4H1-203ENST00000579289 ALX1Q15699 326 aa13.11□□□□□ -0.31
SUPT4H1-203ENST00000579289 USH1GQ495M9 461 aa13.11□□□□□ -0.31
SUPT4H1-203ENST00000579289 RTN4RL1Q86UN2 441 aaPredicted RBP13.11□□□□□ -0.31
SUPT4H1-203ENST00000579289 ATP8B4Q8TF62 1192 aa13.11□□□□□ -0.31
SUPT4H1-203ENST00000579289 ATOH1Q92858 354 aaPredicted RBP13.11□□□□□ -0.31
SUPT4H1-203ENST00000579289 RMDN3Q96TC7 470 aa13.11□□□□□ -0.31
SUPT4H1-203ENST00000579289 C11orf84Q9BUA3 381 aaPredicted RBP13.11□□□□□ -0.31
SUPT4H1-203ENST00000579289 NACAP1Q9BZK3 213 aa13.11□□□□□ -0.31
SUPT4H1-203ENST00000579289 UBA5Q9GZZ9 404 aa13.11□□□□□ -0.31
SUPT4H1-203ENST00000579289 PXMP2Q9NR77 195 aa13.11□□□□□ -0.31
SUPT4H1-203ENST00000579289 USP15Q9Y4E8 981 aaPredicted RBP13.11□□□□□ -0.31
SUPT4H1-203ENST00000579289 SUPT16HQ9Y5B9 1047 aaKnown RBP13.11□□□□□ -0.31
SUPT4H1-203ENST00000579289 ENPP3O14638 875 aa13.1□□□□□ -0.31
SUPT4H1-203ENST00000579289 DGKIO75912 1065 aa13.1□□□□□ -0.31
SUPT4H1-203ENST00000579289 ITGB1P05556 798 aa13.1□□□□□ -0.31
SUPT4H1-203ENST00000579289 SLC3A2P08195 630 aaKnown RBP13.1□□□□□ -0.31
SUPT4H1-203ENST00000579289 CTSHP09668 335 aa13.1□□□□□ -0.31
SUPT4H1-203ENST00000579289 GOLGA8HP0CJ92 632 aa13.1□□□□□ -0.31
SUPT4H1-203ENST00000579289 SMIM10L2AP0DMW4 78 aa13.1□□□□□ -0.31
SUPT4H1-203ENST00000579289 SMIM10L2BP0DMW5 78 aa13.1□□□□□ -0.31
SUPT4H1-203ENST00000579289 HSD17B4P51659 736 aa13.1□□□□□ -0.31
SUPT4H1-203ENST00000579289 ERMP1Q7Z2K6 904 aa13.1□□□□□ -0.31
SUPT4H1-203ENST00000579289 SUGP1Q8IWZ8 645 aaKnown RBP13.1□□□□□ -0.31
SUPT4H1-203ENST00000579289 DHX37Q8IY37 1157 aaKnown RBP13.1□□□□□ -0.31
SUPT4H1-203ENST00000579289 IL31RAQ8NI17 732 aa13.1□□□□□ -0.31
SUPT4H1-203ENST00000579289 OTUD7AQ8TE49 926 aaPredicted RBP13.1□□□□□ -0.31
SUPT4H1-203ENST00000579289 ATP6V0A1Q93050 837 aa13.1□□□□□ -0.31
SUPT4H1-203ENST00000579289 P2RX5Q93086 422 aa13.1□□□□□ -0.31
SUPT4H1-203ENST00000579289 MPHOSPH6Q99547 160 aaKnown RBP13.1□□□□□ -0.31
SUPT4H1-203ENST00000579289 PHF7Q9BWX1 381 aaPredicted RBP13.1□□□□□ -0.31
SUPT4H1-203ENST00000579289 PLVAPQ9BX97 442 aa13.1□□□□□ -0.31
SUPT4H1-203ENST00000579289 S1PR5Q9H228 398 aa13.1□□□□□ -0.31
SUPT4H1-203ENST00000579289 DCTPP1Q9H773 170 aa13.1□□□□□ -0.31
SUPT4H1-203ENST00000579289 C17orf102A2RUQ5 167 aa13.09□□□□□ -0.31
SUPT4H1-203ENST00000579289 GALR2O43603 387 aaPredicted RBP13.09□□□□□ -0.31
SUPT4H1-203ENST00000579289 EIF2AK2P19525 551 aaKnown RBP13.09□□□□□ -0.31
SUPT4H1-203ENST00000579289 UBA1P22314 1058 aaKnown RBP13.09□□□□□ -0.31
SUPT4H1-203ENST00000579289 STOX1Q6ZVD7 989 aa13.09□□□□□ -0.31
SUPT4H1-203ENST00000579289 VSIG10LQ86VR7 867 aa13.09□□□□□ -0.31
SUPT4H1-203ENST00000579289 TMEM105Q8N8V8 129 aa13.09□□□□□ -0.31
SUPT4H1-203ENST00000579289 APBB2Q92870 758 aa13.09□□□□□ -0.31
SUPT4H1-203ENST00000579289 PDCD2LQ9BRP1 358 aa13.09□□□□□ -0.31
SUPT4H1-203ENST00000579289 CHMP4BQ9H444 224 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms