RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 POLR2EP19388 210 aaKnown RBP5.52□□□□□ -1.53
NF1-219ENST00000579081 KRT39Q6A163 491 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 KRT80Q6KB66 452 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 RNF207Q6ZRF8 634 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 FRA10AC1Q70Z53 315 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 ANKRD13AQ8IZ07 590 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 REXO1Q8N1G1 1221 aaKnown RBP5.52□□□□□ -1.53
NF1-219ENST00000579081 MRPL50Q8N5N7 158 aaKnown RBP5.52□□□□□ -1.53
NF1-219ENST00000579081 BHMTQ93088 406 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 ZBED2Q9BTP6 218 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 TRIM15Q9C019 465 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 FAM192AQ9GZU8 254 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 DNAJC17Q9NVM6 304 aaKnown RBP5.52□□□□□ -1.53
NF1-219ENST00000579081 SENP1Q9P0U3 644 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 DPYSL4O14531 572 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 HOXB7P09629 217 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 HSPA9P38646 679 aaKnown RBP5.52□□□□□ -1.53
NF1-219ENST00000579081 MFAP3P55082 362 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 PTK2Q05397 1052 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 POSTNQ15063 836 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 RNF219Q5W0B1 726 aaPredicted RBP5.52□□□□□ -1.53
NF1-219ENST00000579081 CAPRIN2Q6IMN6 1127 aaKnown RBP5.52□□□□□ -1.53
NF1-219ENST00000579081 TRIM58Q8NG06 486 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 GRAMD1AQ96CP6 724 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 MAGED2Q9UNF1 606 aaPredicted RBP5.52□□□□□ -1.53
NF1-219ENST00000579081 ANGEL1Q9UNK9 670 aaKnown RBP5.52□□□□□ -1.53
NF1-219ENST00000579081 AKT3Q9Y243 479 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 NFE2L3Q9Y4A8 694 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 PCDH11XQ9BZA7 1347 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 PCDH11YQ9BZA8 1340 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 H3BRJ5 948 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 H2AFZP0C0S5 128 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 PYGBP11216 843 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 ZNF18P17022 549 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 H2AFVQ71UI9 128 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 KIAA0825Q8IV33 1275 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 TRIM59Q8IWR1 403 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 OPTNQ96CV9 577 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 GIMAP4Q9NUV9 329 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 STX18Q9P2W9 335 aaKnown RBP5.52□□□□□ -1.53
NF1-219ENST00000579081 PCDHB4Q9Y5E5 795 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 SAR1BQ9Y6B6 198 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 ATP10DQ9P241 1426 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 PRR23AA6NEV1 266 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 ZNF263O14978 683 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 IGHDP01880 384 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 PCP11498 1178 aaKnown RBP5.52□□□□□ -1.53
NF1-219ENST00000579081 TUFMP49411 452 aaKnown RBP5.52□□□□□ -1.53
NF1-219ENST00000579081 MTX1Q13505 466 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 CRYMQ14894 314 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 PLA2G4DQ86XP0 818 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 SLFN12Q8IYM2 578 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 RNF139Q8WU17 664 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 LRRC59Q96AG4 307 aaKnown RBP5.52□□□□□ -1.53
NF1-219ENST00000579081 MPP6Q9NZW5 540 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 SCOCQ9UIL1 159 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 THRAP3Q9Y2W1 955 aaKnown RBP5.52□□□□□ -1.53
NF1-219ENST00000579081 MAGI1Q96QZ7 1491 aaPredicted RBP5.52□□□□□ -1.53
NF1-219ENST00000579081 IGF1RP08069 1367 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 RECQLP46063 649 aaPredicted RBP5.52□□□□□ -1.53
NF1-219ENST00000579081 DMP1Q13316 513 aaPredicted RBP5.52□□□□□ -1.53
NF1-219ENST00000579081 INAQ16352 499 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 XAGE2Q96GT9 111 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 METTL14Q9HCE5 456 aaKnown RBP5.52□□□□□ -1.53
NF1-219ENST00000579081 ARMCX3Q9UH62 379 aaPredicted RBP5.52□□□□□ -1.53
NF1-219ENST00000579081 CAPN11Q9UMQ6 739 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 KIAA1210Q9ULL0 1709 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 CCDC78A2IDD5 438 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 ARHGEF9O43307 516 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 TTKP33981 857 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 ART3Q13508 389 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 CCDC184Q52MB2 194 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 FBXO31Q5XUX0 539 aaPredicted RBP5.52□□□□□ -1.53
NF1-219ENST00000579081 ARHGEF18Q6ZSZ5 1173 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 HDDC2Q7Z4H3 204 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 PATL1Q86TB9 770 aaKnown RBP5.52□□□□□ -1.53
NF1-219ENST00000579081 ABTB1Q969K4 478 aaPredicted RBP5.52□□□□□ -1.53
NF1-219ENST00000579081 CCDC127Q96BQ5 260 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 BICC1Q9H694 974 aaKnown RBP5.52□□□□□ -1.53
NF1-219ENST00000579081 PANK4Q9NVE7 773 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 G3BP2Q9UN86 482 aaKnown RBP5.52□□□□□ -1.53
NF1-219ENST00000579081 IQANK1A0A1B0GTG1 560 aa5.51□□□□□ -1.53
NF1-219ENST00000579081 TCP10L2B9ZVM9 353 aa5.51□□□□□ -1.53
NF1-219ENST00000579081 MAFGO15525 162 aa5.51□□□□□ -1.53
NF1-219ENST00000579081 ACADVLP49748 655 aa5.51□□□□□ -1.53
NF1-219ENST00000579081 KRT26Q7Z3Y9 468 aa5.51□□□□□ -1.53
NF1-219ENST00000579081 FBXO11Q86XK2 927 aa5.51□□□□□ -1.53
NF1-219ENST00000579081 WDR75Q8IWA0 830 aaKnown RBP5.51□□□□□ -1.53
NF1-219ENST00000579081 FAM178BQ8IXR5 827 aa5.51□□□□□ -1.53
NF1-219ENST00000579081 COG4Q9H9E3 785 aa5.51□□□□□ -1.53
NF1-219ENST00000579081 LRRC4Q9HBW1 653 aa5.51□□□□□ -1.53
NF1-219ENST00000579081 TRIM39Q9HCM9 518 aa5.51□□□□□ -1.53
NF1-219ENST00000579081 TRPM2O94759 1503 aa5.51□□□□□ -1.53
NF1-219ENST00000579081 BUB1O43683 1085 aa5.51□□□□□ -1.53
NF1-219ENST00000579081 WASHC5Q12768 1159 aa5.51□□□□□ -1.53
NF1-219ENST00000579081 ELF2Q15723 593 aa5.51□□□□□ -1.53
NF1-219ENST00000579081 KRT40Q6A162 431 aa5.51□□□□□ -1.53
NF1-219ENST00000579081 ANO5Q75V66 913 aa5.51□□□□□ -1.53
NF1-219ENST00000579081 ADAT2Q7Z6V5 191 aaKnown RBP5.51□□□□□ -1.53
NF1-219ENST00000579081 STAMQ92783 540 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms