RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 PURBQ96QR8 312 aaKnown RBP10.35□□□□□ -0.75
CDK5RAP3-208ENST00000578525 P2RX7Q99572 595 aaKnown RBP10.35□□□□□ -0.75
CDK5RAP3-208ENST00000578525 ZSWIM4Q9H7M6 989 aa10.35□□□□□ -0.75
CDK5RAP3-208ENST00000578525 MMRN2Q9H8L6 949 aa10.35□□□□□ -0.75
CDK5RAP3-208ENST00000578525 ANKZF1Q9H8Y5 726 aa10.35□□□□□ -0.75
CDK5RAP3-208ENST00000578525 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.35□□□□□ -0.75
CDK5RAP3-208ENST00000578525 ARHGEF10LQ9HCE6 1279 aa10.35□□□□□ -0.75
CDK5RAP3-208ENST00000578525 ARFGAP3Q9NP61 516 aa10.35□□□□□ -0.75
CDK5RAP3-208ENST00000578525 RAB21Q9UL25 225 aa10.35□□□□□ -0.75
CDK5RAP3-208ENST00000578525 PLAGL2Q9UPG8 496 aa10.35□□□□□ -0.75
CDK5RAP3-208ENST00000578525 NPHP3-ACAD11A0A0J9YXS1 232 aa10.34□□□□□ -0.75
CDK5RAP3-208ENST00000578525 ANO9A1A5B4 782 aa10.34□□□□□ -0.75
CDK5RAP3-208ENST00000578525 YDJCA8MPS7 323 aa10.34□□□□□ -0.75
CDK5RAP3-208ENST00000578525 TRAF5O00463 557 aa10.34□□□□□ -0.75
CDK5RAP3-208ENST00000578525 EPHB6O15197 1021 aa10.34□□□□□ -0.75
CDK5RAP3-208ENST00000578525 USO1O60763 962 aaKnown RBP10.34□□□□□ -0.75
CDK5RAP3-208ENST00000578525 LCA5LO95447 670 aa10.34□□□□□ -0.75
CDK5RAP3-208ENST00000578525 TBC1D8O95759 1140 aa10.34□□□□□ -0.75
CDK5RAP3-208ENST00000578525 TUBBP07437 444 aa10.34□□□□□ -0.75
CDK5RAP3-208ENST00000578525 FAM193AP78312 1265 aa10.34□□□□□ -0.75
CDK5RAP3-208ENST00000578525 CKAP4Q07065 602 aaKnown RBP10.34□□□□□ -0.75
CDK5RAP3-208ENST00000578525 USH1GQ495M9 461 aa10.34□□□□□ -0.75
CDK5RAP3-208ENST00000578525 PRR16Q569H4 304 aa10.34□□□□□ -0.75
CDK5RAP3-208ENST00000578525 HERC4Q5GLZ8 1057 aaPredicted RBP10.34□□□□□ -0.75
CDK5RAP3-208ENST00000578525 PAPD7Q5XG87 772 aaKnown RBP10.34□□□□□ -0.75
CDK5RAP3-208ENST00000578525 KCTD17Q8N5Z5 321 aa10.34□□□□□ -0.75
CDK5RAP3-208ENST00000578525 BAP1Q92560 729 aa10.34□□□□□ -0.75
CDK5RAP3-208ENST00000578525 LENG9Q96B70 501 aa10.34□□□□□ -0.75
CDK5RAP3-208ENST00000578525 CCDC42Q96M95 316 aa10.34□□□□□ -0.75
CDK5RAP3-208ENST00000578525 CSRNP1Q96S65 589 aa10.34□□□□□ -0.75
CDK5RAP3-208ENST00000578525 FGFBP2Q9BYJ0 223 aa10.34□□□□□ -0.75
CDK5RAP3-208ENST00000578525 TANGO6Q9C0B7 1094 aa10.34□□□□□ -0.75
CDK5RAP3-208ENST00000578525 GBP3Q9H0R5 595 aa10.34□□□□□ -0.75
CDK5RAP3-208ENST00000578525 STK32BQ9NY57 414 aa10.34□□□□□ -0.75
CDK5RAP3-208ENST00000578525 CEP72Q9P209 647 aa10.34□□□□□ -0.75
CDK5RAP3-208ENST00000578525 FAM184BQ9ULE4 1060 aa10.34□□□□□ -0.75
CDK5RAP3-208ENST00000578525 PRR12Q9ULL5 1215 aa10.34□□□□□ -0.75
CDK5RAP3-208ENST00000578525 A0A1W2PRG0 241 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 POTEFA5A3E0 1075 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 RCCD1A6NED2 376 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 LRRC53A6NM62 1247 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 PIK3CDO00329 1044 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 OPLAHO14841 1288 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 TACC1O75410 805 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 ERLIN1O75477 346 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 ATP1A1P05023 1023 aaKnown RBP10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 POTEIP0CG38 1075 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 RPA1P27694 616 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 EIF4A3P38919 411 aaKnown RBP10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 KIF11P52732 1056 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 KCNMA1Q12791 1236 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 KIF5AQ12840 1032 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 MAPK8IP2Q13387 824 aaPredicted RBP10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 GIT2Q14161 759 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 SLC15A2Q16348 729 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 EDRF1Q3B7T1 1238 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 RSBN1LQ6PCB5 846 aaPredicted RBP10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 POTEGQ6S5H5 508 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 POTEEQ6S8J3 1075 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 RRAGAQ7L523 313 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 CATSPER3Q86XQ3 398 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 TRIM59Q8IWR1 403 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 NELFCDQ8IXH7 590 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 TXLNBQ8N3L3 684 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 SYT2Q8N9I0 419 aaPredicted RBP10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 SCFD1Q8WVM8 642 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 HNRNPLLQ8WVV9 542 aaKnown RBP10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 FAM151AQ8WW52 585 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 SYN2Q92777 582 aaPredicted RBP10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 SECISBP2LQ93073 1101 aaKnown RBP10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 UIMC1Q96RL1 719 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 POLR3CQ9BUI4 534 aaPredicted RBP10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 LSM14BQ9BX40 385 aaKnown RBP10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 LACRTQ9GZZ8 138 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 NUCKS1Q9H1E3 243 aaKnown RBP10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 KCTD10Q9H3F6 313 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 GOPCQ9HD26 462 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 FAM207AQ9NSI2 230 aaPredicted RBP10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 EMILIN3Q9NT22 766 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 TBC1D7Q9P0N9 293 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 ARHGAP20Q9P2F6 1191 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 ZNF70Q9UC06 446 aaPredicted RBP10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 HDAC9Q9UKV0 1011 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 VAV3Q9UKW4 847 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 DNM3Q9UQ16 869 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 TMX2Q9Y320 296 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 PCDHA13Q9Y5I0 950 aa10.33□□□□□ -0.76
CDK5RAP3-208ENST00000578525 SSU72P8A0A1W2PR75 194 aa10.32□□□□□ -0.76
CDK5RAP3-208ENST00000578525 SPDYE2BA6NHP3 402 aa10.32□□□□□ -0.76
CDK5RAP3-208ENST00000578525 TCP10L2B9ZVM9 353 aa10.32□□□□□ -0.76
CDK5RAP3-208ENST00000578525 FAM86B1E9PN63 330 aa10.32□□□□□ -0.76
CDK5RAP3-208ENST00000578525 ZNF263O14978 683 aa10.32□□□□□ -0.76
CDK5RAP3-208ENST00000578525 CETN3O15182 167 aa10.32□□□□□ -0.76
CDK5RAP3-208ENST00000578525 MSH4O15457 936 aa10.32□□□□□ -0.76
CDK5RAP3-208ENST00000578525 PJA2O43164 708 aa10.32□□□□□ -0.76
CDK5RAP3-208ENST00000578525 FAM86B2P0C5J1 330 aa10.32□□□□□ -0.76
CDK5RAP3-208ENST00000578525 SPDYE6P0CI01 402 aa10.32□□□□□ -0.76
CDK5RAP3-208ENST00000578525 SPATA31C1P0DKV0 1188 aa10.32□□□□□ -0.76
CDK5RAP3-208ENST00000578525 TAL1P17542 331 aaPredicted RBP10.32□□□□□ -0.76
CDK5RAP3-208ENST00000578525 ZNF76P36508 570 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms