RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 NCAPHQ15003 741 aa18.97■□□□□ 0.63
SREBF1-218ENST00000578469 CEP55Q53EZ4 464 aa18.97■□□□□ 0.63
SREBF1-218ENST00000578469 MUM1L1Q5H9M0 696 aa18.97■□□□□ 0.63
SREBF1-218ENST00000578469 HYIQ5T013 277 aa18.97■□□□□ 0.63
SREBF1-218ENST00000578469 ZNF658Q5TYW1 1059 aaPredicted RBP18.97■□□□□ 0.63
SREBF1-218ENST00000578469 RNF207Q6ZRF8 634 aa18.97■□□□□ 0.63
SREBF1-218ENST00000578469 REPS2Q8NFH8 660 aa18.97■□□□□ 0.63
SREBF1-218ENST00000578469 SYTL5Q8TDW5 730 aaPredicted RBP18.97■□□□□ 0.63
SREBF1-218ENST00000578469 RAD54LQ92698 747 aa18.97■□□□□ 0.63
SREBF1-218ENST00000578469 RPTORQ8N122 1335 aa18.97■□□□□ 0.63
SREBF1-218ENST00000578469 IGLV3-22A0A075B6J6 115 aa18.96■□□□□ 0.63
SREBF1-218ENST00000578469 MYCP01106 439 aaPredicted RBP18.96■□□□□ 0.63
SREBF1-218ENST00000578469 TPM3P06753 285 aa18.96■□□□□ 0.63
SREBF1-218ENST00000578469 CDC25BP30305 580 aa18.96■□□□□ 0.63
SREBF1-218ENST00000578469 LACTBP83111 547 aaPredicted RBP18.96■□□□□ 0.63
SREBF1-218ENST00000578469 NCAPH2Q6IBW4 605 aa18.96■□□□□ 0.63
SREBF1-218ENST00000578469 SNRNP48Q6IEG0 339 aaKnown RBP18.96■□□□□ 0.63
SREBF1-218ENST00000578469 NIPA1Q7RTP0 329 aa18.96■□□□□ 0.63
SREBF1-218ENST00000578469 DRC7Q8IY82 874 aa18.96■□□□□ 0.63
SREBF1-218ENST00000578469 PROCA1Q8NCQ7 364 aaPredicted RBP18.96■□□□□ 0.63
SREBF1-218ENST00000578469 LARP4BQ92615 738 aaKnown RBP18.96■□□□□ 0.63
SREBF1-218ENST00000578469 MXRA8Q9BRK3 442 aa18.96■□□□□ 0.63
SREBF1-218ENST00000578469 TEX13BQ9BXU2 312 aa18.96■□□□□ 0.63
SREBF1-218ENST00000578469 TRIOBPQ9H2D6 2365 aa18.95■□□□□ 0.62
SREBF1-218ENST00000578469 HOXA7P31268 230 aaPredicted RBP18.95■□□□□ 0.62
SREBF1-218ENST00000578469 UBXN2AP68543 259 aa18.95■□□□□ 0.62
SREBF1-218ENST00000578469 PPIL2Q13356 520 aa18.95■□□□□ 0.62
SREBF1-218ENST00000578469 STIM1Q13586 685 aa18.95■□□□□ 0.62
SREBF1-218ENST00000578469 NSMFQ6X4W1 530 aa18.95■□□□□ 0.62
SREBF1-218ENST00000578469 GADL1Q6ZQY3 521 aa18.95■□□□□ 0.62
SREBF1-218ENST00000578469 KCTD17Q8N5Z5 321 aa18.95■□□□□ 0.62
SREBF1-218ENST00000578469 GJA10Q969M2 543 aa18.95■□□□□ 0.62
SREBF1-218ENST00000578469 MRFAP1L1Q96HT8 127 aa18.95■□□□□ 0.62
SREBF1-218ENST00000578469 TRIM9Q9C026 710 aa18.95■□□□□ 0.62
SREBF1-218ENST00000578469 BMP2KQ9NSY1 1161 aaPredicted RBP18.95■□□□□ 0.62
SREBF1-218ENST00000578469 BLOC1S4Q9NUP1 217 aa18.95■□□□□ 0.62
SREBF1-218ENST00000578469 COLQQ9Y215 455 aaPredicted RBP18.95■□□□□ 0.62
SREBF1-218ENST00000578469 A0A0G2JLL6 359 aaPredicted RBP18.94■□□□□ 0.62
SREBF1-218ENST00000578469 SPDYE16A6NNV3 312 aaPredicted RBP18.94■□□□□ 0.62
SREBF1-218ENST00000578469 MEIS1O00470 390 aa18.94■□□□□ 0.62
SREBF1-218ENST00000578469 PPP1R2P41236 205 aa18.94■□□□□ 0.62
SREBF1-218ENST00000578469 RPS6P62753 249 aaKnown RBP18.94■□□□□ 0.62
SREBF1-218ENST00000578469 ASIC1P78348 528 aa18.94■□□□□ 0.62
SREBF1-218ENST00000578469 DHX8Q14562 1220 aaKnown RBP18.94■□□□□ 0.62
SREBF1-218ENST00000578469 MCM6Q14566 821 aa18.94■□□□□ 0.62
SREBF1-218ENST00000578469 TMEM132BQ14DG7 1078 aa18.94■□□□□ 0.62
SREBF1-218ENST00000578469 KMT5BQ4FZB7 885 aa18.94■□□□□ 0.62
SREBF1-218ENST00000578469 LRCH2Q5VUJ6 765 aa18.94■□□□□ 0.62
SREBF1-218ENST00000578469 PCNX4Q63HM2 1172 aa18.94■□□□□ 0.62
SREBF1-218ENST00000578469 PRRT2Q7Z6L0 340 aaPredicted RBP18.94■□□□□ 0.62
SREBF1-218ENST00000578469 MB21D1Q8N884 522 aa18.94■□□□□ 0.62
SREBF1-218ENST00000578469 CYP2W1Q8TAV3 490 aa18.94■□□□□ 0.62
SREBF1-218ENST00000578469 SH3TC2Q8TF17 1288 aa18.94■□□□□ 0.62
SREBF1-218ENST00000578469 SLC5A5Q92911 643 aa18.94■□□□□ 0.62
SREBF1-218ENST00000578469 UIMC1Q96RL1 719 aa18.94■□□□□ 0.62
SREBF1-218ENST00000578469 NUDT12Q9BQG2 462 aa18.94■□□□□ 0.62
SREBF1-218ENST00000578469 WDR11Q9BZH6 1224 aa18.94■□□□□ 0.62
SREBF1-218ENST00000578469 EXOC1Q9NV70 894 aa18.94■□□□□ 0.62
SREBF1-218ENST00000578469 COL20A1Q9P218 1284 aa18.94■□□□□ 0.62
SREBF1-218ENST00000578469 ZNF214Q9UL59 606 aaPredicted RBP18.94■□□□□ 0.62
SREBF1-218ENST00000578469 SMCHD1A6NHR9 2005 aa18.94■□□□□ 0.62
SREBF1-218ENST00000578469 PVALEFA0A1B0GWK0 134 aa18.93■□□□□ 0.62
SREBF1-218ENST00000578469 PPP1R3GB7ZBB8 358 aa18.93■□□□□ 0.62
SREBF1-218ENST00000578469 BTBD19C9JJ37 291 aa18.93■□□□□ 0.62
SREBF1-218ENST00000578469 CBFA2T2O43439 604 aa18.93■□□□□ 0.62
SREBF1-218ENST00000578469 RHOBTB3O94955 611 aa18.93■□□□□ 0.62
SREBF1-218ENST00000578469 BCRP11274 1271 aa18.93■□□□□ 0.62
SREBF1-218ENST00000578469 STAT3P40763 770 aa18.93■□□□□ 0.62
SREBF1-218ENST00000578469 SPIRE1Q08AE8 756 aa18.93■□□□□ 0.62
SREBF1-218ENST00000578469 PABPC4Q13310 644 aaKnown RBP eCLIP18.93■□□□□ 0.624e-7■■□□□ 13
SREBF1-218ENST00000578469 SPATA1Q5VX52 437 aa18.93■□□□□ 0.62
SREBF1-218ENST00000578469 XRRA1Q6P2D8 792 aa18.93■□□□□ 0.62
SREBF1-218ENST00000578469 LRRC15Q8TF66 581 aa18.93■□□□□ 0.62
SREBF1-218ENST00000578469 ZNF577Q9BSK1 485 aa18.93■□□□□ 0.62
SREBF1-218ENST00000578469 ACAD9Q9H845 621 aa18.93■□□□□ 0.62
SREBF1-218ENST00000578469 VAV3Q9UKW4 847 aa18.93■□□□□ 0.62
SREBF1-218ENST00000578469 KCNH4Q9UQ05 1017 aa18.93■□□□□ 0.62
SREBF1-218ENST00000578469 FRMPD4Q14CM0 1322 aa18.93■□□□□ 0.62
SREBF1-218ENST00000578469 PARP14Q460N5 1801 aa18.93■□□□□ 0.62
SREBF1-218ENST00000578469 IRF6O14896 467 aa18.92■□□□□ 0.62
SREBF1-218ENST00000578469 KLRC4O43908 158 aa18.92■□□□□ 0.62
SREBF1-218ENST00000578469 GAS7O60861 476 aa18.92■□□□□ 0.62
SREBF1-218ENST00000578469 RPA1P27694 616 aa18.92■□□□□ 0.62
SREBF1-218ENST00000578469 HOXD10P28358 340 aa18.92■□□□□ 0.62
SREBF1-218ENST00000578469 IRX3P78415 501 aaPredicted RBP18.92■□□□□ 0.62
SREBF1-218ENST00000578469 BAATQ14032 418 aaPredicted RBP18.92■□□□□ 0.62
SREBF1-218ENST00000578469 PLS1Q14651 629 aa18.92■□□□□ 0.62
SREBF1-218ENST00000578469 ARHGEF16Q5VV41 709 aa18.92■□□□□ 0.62
SREBF1-218ENST00000578469 KLHL10Q6JEL2 608 aa18.92■□□□□ 0.62
SREBF1-218ENST00000578469 CNNM4Q6P4Q7 775 aa18.92■□□□□ 0.62
SREBF1-218ENST00000578469 SLC30A10Q6XR72 485 aa18.92■□□□□ 0.62
SREBF1-218ENST00000578469 FASTKD5Q7L8L6 764 aaKnown RBP18.92■□□□□ 0.62
SREBF1-218ENST00000578469 CHST13Q8NET6 341 aa18.92■□□□□ 0.62
SREBF1-218ENST00000578469 TAAR1Q96RJ0 339 aa18.92■□□□□ 0.62
SREBF1-218ENST00000578469 RMDN3Q96TC7 470 aa18.92■□□□□ 0.62
SREBF1-218ENST00000578469 RIT2Q99578 217 aa18.92■□□□□ 0.62
SREBF1-218ENST00000578469 POLR3CQ9BUI4 534 aaPredicted RBP18.92■□□□□ 0.62
SREBF1-218ENST00000578469 TEKT3Q9BXF9 490 aa18.92■□□□□ 0.62
SREBF1-218ENST00000578469 ARHGAP39Q9C0H5 1083 aa18.92■□□□□ 0.62
SREBF1-218ENST00000578469 FANCLQ9NW38 375 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms