RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 PDILTQ8N807 584 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 DNAJC9Q8WXX5 260 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 FAM136AQ96C01 138 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 CDK5RAP3Q96JB5 506 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 ZFRQ96KR1 1074 aaKnown RBP8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 ZIM3Q96PE6 472 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 DESI2Q9BSY9 194 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 BEGAINQ9BUH8 593 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 DRC3Q9H069 523 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 NSRP1Q9H0G5 558 aaKnown RBP8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 RNPEPL1Q9HAU8 725 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 TIMMDC1Q9NPL8 285 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 PPANQ9NQ55 473 aaKnown RBP8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 C6orf203Q9P0P8 240 aaPredicted RBP8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 SLC12A6Q9UHW9 1150 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 MTMR7Q9Y216 660 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 NR2E3Q9Y5X4 410 aa8.7□□□□□ -1.02
TOM1L1-220ENST00000575333 SBNO2Q9Y2G9 1366 aa8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 KAT6BQ8WYB5 2073 aa8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 STRCQ7RTU9 1775 aa8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 BICDL2A1A5D9 508 aa8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 SPECC1L-ADORA2AF8WAN1 911 aa8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 HNRNPRO43390 633 aaKnown RBP8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 NDUFB5O43674 189 aa8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 BBOX1O75936 387 aa8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 LARGE1O95461 756 aa8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 LDHAP00338 332 aaKnown RBP8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 ENDOUP21128 410 aaKnown RBP8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 VARSP26640 1264 aaKnown RBP8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 MATR3P43243 847 aaKnown RBP eCLIP8.69□□□□□ -1.029e-7■■■■□ 26.6
TOM1L1-220ENST00000575333 MSH2P43246 934 aa8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 SERPINB4P48594 390 aa8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 TUBP50607 506 aa8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 MCCD1P59942 119 aaPredicted RBP8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 DMPKQ09013 629 aa8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 P3H1Q32P28 736 aa8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 CNPY1Q3B7I2 92 aa8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 ZFYVE27Q5T4F4 411 aa8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 AGBL2Q5U5Z8 902 aa8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 UBE2Q1Q7Z7E8 422 aa8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 TXNDC2Q86VQ3 553 aa8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 WDR75Q8IWA0 830 aaKnown RBP8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 MYO1HQ8N1T3 1032 aa8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 ENDOVQ8N8Q3 282 aaKnown RBP8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 EIF1ADQ8N9N8 165 aaKnown RBP8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 DIS3LQ8TF46 1054 aaKnown RBP8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 SETDB2Q96T68 719 aa8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 DUSP9Q99956 384 aaKnown RBP8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 SIKE1Q9BRV8 207 aa8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 HSD3B7Q9H2F3 369 aa8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 HAUS4Q9H6D7 363 aa8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 CLK4Q9HAZ1 481 aaKnown RBP8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 SAMSN1Q9NSI8 373 aaKnown RBP8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 ADAM22Q9P0K1 906 aa8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 TMEM2Q9UHN6 1383 aa8.69□□□□□ -1.02
TOM1L1-220ENST00000575333 TTC34A8MYJ7 566 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 MATN2O00339 956 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 CBFA2T3O75081 653 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 STK10O94804 968 aaKnown RBP8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 MAP4K4O95819 1239 aaPredicted RBP8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 FOSL1P15407 271 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 DRD4P21917 467 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 CDK17Q00537 523 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 ITGA9Q13797 1035 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 CYLC2Q14093 348 aaPredicted RBP8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 NDUFA5Q16718 116 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 FKBP15Q5T1M5 1219 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 SYDE2Q5VT97 1194 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 NLRP9Q7RTR0 991 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 TRPM8Q7Z2W7 1104 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 LAPTM4BQ86VI4 370 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 PPFIBP1Q86W92 1011 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 BPHLQ86WA6 291 aaPredicted RBP8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 TTC30AQ86WT1 665 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 SLC43A3Q8NBI5 491 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 RBBP8NLQ8NC74 664 aaPredicted RBP8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 CAGE1Q8TC20 777 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 RUFY2Q8WXA3 655 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 CHMP6Q96FZ7 201 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 NEK1Q96PY6 1258 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 RTFDC1Q9BY42 306 aaPredicted RBP8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 RPAP3Q9H6T3 665 aaPredicted RBP8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 C19orf44Q9H6X5 657 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 ARHGEF3Q9NR81 526 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 INIPQ9NRY2 104 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 SAMD15Q9P1V8 674 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 KIAA1522Q9P206 1035 aaPredicted RBP8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 ZMAT5Q9UDW3 170 aaKnown RBP8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 DACH1Q9UI36 760 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 SATB2Q9UPW6 733 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 CHMP2BQ9UQN3 213 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 EID1Q9Y6B2 187 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 SLC30A1Q9Y6M5 507 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 AKAP12Q02952 1782 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 PLEKHG1Q9ULL1 1385 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 CRYBG1Q9Y4K1 1723 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 SLIT1O75093 1534 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 H3BQV1 296 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 CLASP2O75122 1294 aaKnown RBP8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 PDHA1P08559 390 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms