RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 MCTP2Q6DN12 878 aa26.27■■□□□ 1.8
NPLOC4-217ENST00000574897 FAM83AQ86UY5 434 aa26.27■■□□□ 1.8
NPLOC4-217ENST00000574897 ERGIC2Q96RQ1 377 aa26.27■■□□□ 1.8
NPLOC4-217ENST00000574897 BCAS3Q9H6U6 928 aa26.27■■□□□ 1.8
NPLOC4-217ENST00000574897 PIM2Q9P1W9 311 aa26.27■■□□□ 1.8
NPLOC4-217ENST00000574897 CGNQ9P2M7 1197 aaKnown RBP26.27■■□□□ 1.8
NPLOC4-217ENST00000574897 MRFAP1Q9Y605 127 aa26.27■■□□□ 1.8
NPLOC4-217ENST00000574897 DGKZQ13574 1117 aa26.27■■□□□ 1.8
NPLOC4-217ENST00000574897 FKBP1CQ5VVH2 108 aa26.27■■□□□ 1.8
NPLOC4-217ENST00000574897 GPIHBP1Q8IV16 184 aa26.27■■□□□ 1.8
NPLOC4-217ENST00000574897 CCDC65Q8IXS2 484 aa26.27■■□□□ 1.8
NPLOC4-217ENST00000574897 CCDC155Q8N6L0 562 aa26.27■■□□□ 1.8
NPLOC4-217ENST00000574897 MNS1Q8NEH6 495 aa26.27■■□□□ 1.8
NPLOC4-217ENST00000574897 MYOZ2Q9NPC6 264 aa26.27■■□□□ 1.8
NPLOC4-217ENST00000574897 BRCA1P38398 1863 aaKnown RBP26.27■■□□□ 1.8
NPLOC4-217ENST00000574897 TBC1D12O60347 775 aa26.26■■□□□ 1.79
NPLOC4-217ENST00000574897 KRT18P05783 430 aaKnown RBP26.26■■□□□ 1.79
NPLOC4-217ENST00000574897 FKBP15Q5T1M5 1219 aa26.26■■□□□ 1.79
NPLOC4-217ENST00000574897 RGL1Q9NZL6 768 aa26.26■■□□□ 1.79
NPLOC4-217ENST00000574897 KIF5CO60282 957 aa26.26■■□□□ 1.79
NPLOC4-217ENST00000574897 RPA1P27694 616 aa26.26■■□□□ 1.79
NPLOC4-217ENST00000574897 CIAPIN1Q6FI81 312 aa26.26■■□□□ 1.79
NPLOC4-217ENST00000574897 SLC35F6Q8N357 371 aa26.26■■□□□ 1.79
NPLOC4-217ENST00000574897 FAM20AQ96MK3 541 aa26.26■■□□□ 1.79
NPLOC4-217ENST00000574897 TADA3O75528 432 aa26.25■■□□□ 1.79
NPLOC4-217ENST00000574897 CYP3A4P08684 503 aa26.25■■□□□ 1.79
NPLOC4-217ENST00000574897 CASP5P51878 434 aa26.25■■□□□ 1.79
NPLOC4-217ENST00000574897 MAN2A1Q16706 1144 aa26.25■■□□□ 1.79
NPLOC4-217ENST00000574897 SCFD1Q8WVM8 642 aa26.25■■□□□ 1.79
NPLOC4-217ENST00000574897 FAM207AQ9NSI2 230 aaPredicted RBP26.25■■□□□ 1.79
NPLOC4-217ENST00000574897 SIK3Q9Y2K2 1263 aa26.25■■□□□ 1.79
NPLOC4-217ENST00000574897 SPDYE4A6NLX3 237 aa26.25■■□□□ 1.79
NPLOC4-217ENST00000574897 TRAF5O00463 557 aa26.25■■□□□ 1.79
NPLOC4-217ENST00000574897 KIF4BQ2VIQ3 1234 aa26.25■■□□□ 1.79
NPLOC4-217ENST00000574897 SLC16A10Q8TF71 515 aa26.25■■□□□ 1.79
NPLOC4-217ENST00000574897 CHURC1Q8WUH1 139 aa26.25■■□□□ 1.79
NPLOC4-217ENST00000574897 TSG101Q99816 390 aa26.25■■□□□ 1.79
NPLOC4-217ENST00000574897 EPC1Q9H2F5 836 aa26.25■■□□□ 1.79
NPLOC4-217ENST00000574897 HERVK_113P62684 666 aa26.24■■□□□ 1.79
NPLOC4-217ENST00000574897 RASA3Q14644 834 aa26.24■■□□□ 1.79
NPLOC4-217ENST00000574897 MEA1Q16626 185 aa26.24■■□□□ 1.79
NPLOC4-217ENST00000574897 ERMNQ8TAM6 284 aa26.24■■□□□ 1.79
NPLOC4-217ENST00000574897 PPP1R1BQ9UD71 204 aaPredicted RBP26.24■■□□□ 1.79
NPLOC4-217ENST00000574897 GCOM1H8Y6P7 765 aaPredicted RBP26.24■■□□□ 1.79
NPLOC4-217ENST00000574897 TFRCP02786 760 aaKnown RBP26.24■■□□□ 1.79
NPLOC4-217ENST00000574897 POLR2MP0CAP2 368 aa26.24■■□□□ 1.79
NPLOC4-217ENST00000574897 INPP5BP32019 993 aa26.24■■□□□ 1.79
NPLOC4-217ENST00000574897 GIT2Q14161 759 aa26.24■■□□□ 1.79
NPLOC4-217ENST00000574897 ZNF397Q8NF99 534 aaPredicted RBP26.24■■□□□ 1.79
NPLOC4-217ENST00000574897 REEP2Q9BRK0 252 aa26.24■■□□□ 1.79
NPLOC4-217ENST00000574897 NUP58Q9BVL2 599 aa26.24■■□□□ 1.79
NPLOC4-217ENST00000574897 ZNF341Q9BYN7 854 aa26.24■■□□□ 1.79
NPLOC4-217ENST00000574897 ASTN2O75129 1339 aaPredicted RBP26.23■■□□□ 1.79
NPLOC4-217ENST00000574897 CHMP2AO43633 222 aa26.23■■□□□ 1.79
NPLOC4-217ENST00000574897 ZBED6P86452 979 aa26.23■■□□□ 1.79
NPLOC4-217ENST00000574897 TSR1Q2NL82 804 aaKnown RBP26.23■■□□□ 1.79
NPLOC4-217ENST00000574897 EIF2AK1Q9BQI3 630 aaKnown RBP26.23■■□□□ 1.79
NPLOC4-217ENST00000574897 DNM3Q9UQ16 869 aa26.23■■□□□ 1.79
NPLOC4-217ENST00000574897 FRMD3A2A2Y4 597 aa26.22■■□□□ 1.79
NPLOC4-217ENST00000574897 RSPH10B2B2RC85 870 aa26.22■■□□□ 1.79
NPLOC4-217ENST00000574897 RSPH10BP0C881 870 aa26.22■■□□□ 1.79
NPLOC4-217ENST00000574897 PPP2R3AQ06190 1150 aa26.22■■□□□ 1.79
NPLOC4-217ENST00000574897 LDHDQ86WU2 507 aa26.22■■□□□ 1.79
NPLOC4-217ENST00000574897 VPS33BQ9H267 617 aa26.22■■□□□ 1.79
NPLOC4-217ENST00000574897 TAOK3Q9H2K8 898 aa26.22■■□□□ 1.79
NPLOC4-217ENST00000574897 PLEKP08567 350 aaPredicted RBP26.22■■□□□ 1.79
NPLOC4-217ENST00000574897 CTTNQ14247 550 aaKnown RBP26.22■■□□□ 1.79
NPLOC4-217ENST00000574897 SYT2Q8N9I0 419 aaPredicted RBP26.22■■□□□ 1.79
NPLOC4-217ENST00000574897 RETREG2Q8NC44 543 aa26.22■■□□□ 1.79
NPLOC4-217ENST00000574897 AGBL1Q96MI9 1066 aa26.22■■□□□ 1.79
NPLOC4-217ENST00000574897 FEZ1Q99689 392 aa26.22■■□□□ 1.79
NPLOC4-217ENST00000574897 BHMT2Q9H2M3 363 aa26.22■■□□□ 1.79
NPLOC4-217ENST00000574897 KCTD10Q9H3F6 313 aa26.22■■□□□ 1.79
NPLOC4-217ENST00000574897 MMRN2Q9H8L6 949 aa26.22■■□□□ 1.79
NPLOC4-217ENST00000574897 EMILIN3Q9NT22 766 aa26.22■■□□□ 1.79
NPLOC4-217ENST00000574897 NFKBIEO00221 500 aa26.21■■□□□ 1.79
NPLOC4-217ENST00000574897 FGFR1OPO95684 399 aaKnown RBP26.21■■□□□ 1.79
NPLOC4-217ENST00000574897 FKBP3Q00688 224 aaKnown RBP26.21■■□□□ 1.79
NPLOC4-217ENST00000574897 SMCR8Q8TEV9 937 aaPredicted RBP26.21■■□□□ 1.79
NPLOC4-217ENST00000574897 UBXN4Q92575 508 aa26.21■■□□□ 1.79
NPLOC4-217ENST00000574897 GUCA1BQ9UMX6 200 aa26.21■■□□□ 1.79
NPLOC4-217ENST00000574897 PHF20L1A8MW92 1017 aa26.21■■□□□ 1.79
NPLOC4-217ENST00000574897 DALRD3Q5D0E6 543 aaKnown RBP26.21■■□□□ 1.79
NPLOC4-217ENST00000574897 SFR1Q86XK3 245 aa26.21■■□□□ 1.79
NPLOC4-217ENST00000574897 PIGOQ8TEQ8 1089 aa26.21■■□□□ 1.79
NPLOC4-217ENST00000574897 RUSC1Q9BVN2 902 aa26.21■■□□□ 1.79
NPLOC4-217ENST00000574897 TANGO6Q9C0B7 1094 aa26.21■■□□□ 1.79
NPLOC4-217ENST00000574897 COL4A3BPQ9Y5P4 624 aa26.21■■□□□ 1.79
NPLOC4-217ENST00000574897 ZBTB39O15060 712 aa26.2■■□□□ 1.79
NPLOC4-217ENST00000574897 ASNSP08243 561 aa26.2■■□□□ 1.79
NPLOC4-217ENST00000574897 JDP2Q8WYK2 163 aa26.2■■□□□ 1.79
NPLOC4-217ENST00000574897 ZSWIM4Q9H7M6 989 aa26.2■■□□□ 1.79
NPLOC4-217ENST00000574897 NHEJ1Q9H9Q4 299 aaPredicted RBP26.2■■□□□ 1.79
NPLOC4-217ENST00000574897 PITPNM2Q9BZ72 1349 aa26.2■■□□□ 1.78
NPLOC4-217ENST00000574897 SLC26A4O43511 780 aa26.2■■□□□ 1.78
NPLOC4-217ENST00000574897 POLD1P28340 1107 aa26.2■■□□□ 1.78
NPLOC4-217ENST00000574897 MAP3K10Q02779 954 aa26.2■■□□□ 1.78
NPLOC4-217ENST00000574897 CCDC40Q4G0X9 1142 aa26.2■■□□□ 1.78
NPLOC4-217ENST00000574897 FIGNQ5HY92 759 aa26.2■■□□□ 1.78
NPLOC4-217ENST00000574897 TEPSINQ96N21 525 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms