RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-223ENST00000573895 SMCO2A6NFE2 343 aa16.41■□□□□ 0.22
ABR-223ENST00000573895 CTDNEP1O95476 244 aa16.41■□□□□ 0.22
ABR-223ENST00000573895 F2P00734 622 aa16.41■□□□□ 0.22
ABR-223ENST00000573895 PDCP20941 246 aa16.41■□□□□ 0.22
ABR-223ENST00000573895 ADCY7P51828 1080 aa16.41■□□□□ 0.22
ABR-223ENST00000573895 SSRP1Q08945 709 aaKnown RBP16.41■□□□□ 0.22
ABR-223ENST00000573895 SEMA3FQ13275 785 aa16.41■□□□□ 0.22
ABR-223ENST00000573895 AP3B2Q13367 1082 aa16.41■□□□□ 0.22
ABR-223ENST00000573895 HSDL1Q3SXM5 330 aa16.41■□□□□ 0.22
ABR-223ENST00000573895 MCTP2Q6DN12 878 aa16.41■□□□□ 0.22
ABR-223ENST00000573895 TRIM22Q8IYM9 498 aa16.41■□□□□ 0.22
ABR-223ENST00000573895 SPRYD3Q8NCJ5 442 aa16.41■□□□□ 0.22
ABR-223ENST00000573895 CCDC12Q8WUD4 166 aaPredicted RBP16.41■□□□□ 0.22
ABR-223ENST00000573895 NOC4LQ9BVI4 516 aaKnown RBP16.41■□□□□ 0.22
ABR-223ENST00000573895 RNF26Q9BY78 433 aaPredicted RBP16.41■□□□□ 0.22
ABR-223ENST00000573895 TRMT13Q9NUP7 481 aaKnown RBP16.41■□□□□ 0.22
ABR-223ENST00000573895 RTEL1Q9NZ71 1219 aa16.41■□□□□ 0.22
ABR-223ENST00000573895 HAS3O00219 553 aa16.4■□□□□ 0.22
ABR-223ENST00000573895 CLK2P49760 499 aaKnown RBP16.4■□□□□ 0.22
ABR-223ENST00000573895 AKAP17AQ02040 695 aaKnown RBP16.4■□□□□ 0.22
ABR-223ENST00000573895 UBE2SQ16763 222 aa16.4■□□□□ 0.22
ABR-223ENST00000573895 C9orf50Q5SZB4 431 aa16.4■□□□□ 0.22
ABR-223ENST00000573895 WASF1Q92558 559 aa16.4■□□□□ 0.22
ABR-223ENST00000573895 LRCH3Q96II8 777 aa16.4■□□□□ 0.22
ABR-223ENST00000573895 ZFP91Q96JP5 570 aaPredicted RBP16.4■□□□□ 0.22
ABR-223ENST00000573895 PPP1R12CQ9BZL4 782 aa16.4■□□□□ 0.22
ABR-223ENST00000573895 ZMYND12Q9H0C1 365 aa16.4■□□□□ 0.22
ABR-223ENST00000573895 FOXD4L1Q9NU39 408 aa16.4■□□□□ 0.22
ABR-223ENST00000573895 CIZ1Q9ULV3 898 aaPredicted RBP16.4■□□□□ 0.22
ABR-223ENST00000573895 UBIAD1Q9Y5Z9 338 aa16.4■□□□□ 0.22
ABR-223ENST00000573895 KAT6AQ92794 2004 aa16.4■□□□□ 0.22
ABR-223ENST00000573895 PITPNM1O00562 1244 aa16.39■□□□□ 0.21
ABR-223ENST00000573895 GJB2P29033 226 aa16.39■□□□□ 0.21
ABR-223ENST00000573895 PSEN2P49810 448 aa16.39■□□□□ 0.21
ABR-223ENST00000573895 EPHB4P54760 987 aa16.39■□□□□ 0.21
ABR-223ENST00000573895 PKN1Q16512 942 aa16.39■□□□□ 0.21
ABR-223ENST00000573895 FAM47CQ5HY64 1035 aa16.39■□□□□ 0.21
ABR-223ENST00000573895 FAM184AQ8NB25 1140 aa16.39■□□□□ 0.21
ABR-223ENST00000573895 JADE2Q9NQC1 790 aa16.39■□□□□ 0.21
ABR-223ENST00000573895 ORC3Q9UBD5 711 aaPredicted RBP16.39■□□□□ 0.21
ABR-223ENST00000573895 STK36Q9NRP7 1315 aa16.39■□□□□ 0.21
ABR-223ENST00000573895 TANC1Q9C0D5 1861 aa16.38■□□□□ 0.21
ABR-223ENST00000573895 NOP56O00567 594 aaKnown RBP16.38■□□□□ 0.21
ABR-223ENST00000573895 CSF2RAP15509 400 aa16.38■□□□□ 0.21
ABR-223ENST00000573895 ITGB5P18084 799 aa16.38■□□□□ 0.21
ABR-223ENST00000573895 GNA11P29992 359 aa16.38■□□□□ 0.21
ABR-223ENST00000573895 CYP2C18P33260 490 aa16.38■□□□□ 0.21
ABR-223ENST00000573895 MFSD10Q14728 455 aa16.38■□□□□ 0.21
ABR-223ENST00000573895 PSRC1Q6PGN9 363 aaPredicted RBP16.38■□□□□ 0.21
ABR-223ENST00000573895 CYFIP1Q7L576 1253 aa16.38■□□□□ 0.21
ABR-223ENST00000573895 RPUSD2Q8IZ73 545 aaKnown RBP16.38■□□□□ 0.21
ABR-223ENST00000573895 FAM177A1Q8N128 213 aaPredicted RBP16.38■□□□□ 0.21
ABR-223ENST00000573895 C7orf31Q8N865 590 aa16.38■□□□□ 0.21
ABR-223ENST00000573895 C16orf70Q9BSU1 422 aa16.38■□□□□ 0.21
ABR-223ENST00000573895 ANO3Q9BYT9 981 aa16.38■□□□□ 0.21
ABR-223ENST00000573895 IL23AQ9NPF7 189 aa16.38■□□□□ 0.21
ABR-223ENST00000573895 SH3GLB2Q9NR46 395 aa16.38■□□□□ 0.21
ABR-223ENST00000573895 GTF2IRD1Q9UHL9 959 aa16.38■□□□□ 0.21
ABR-223ENST00000573895 JAK2O60674 1132 aa16.37■□□□□ 0.21
ABR-223ENST00000573895 DEXIO95424 95 aa16.37■□□□□ 0.21
ABR-223ENST00000573895 KCNA2P16389 499 aa16.37■□□□□ 0.21
ABR-223ENST00000573895 DDIT3P35638 169 aa16.37■□□□□ 0.21
ABR-223ENST00000573895 SREBF1P36956 1147 aa16.37■□□□□ 0.21
ABR-223ENST00000573895 SMAD3P84022 425 aaKnown RBP16.37■□□□□ 0.21
ABR-223ENST00000573895 BFSP2Q13515 415 aa16.37■□□□□ 0.21
ABR-223ENST00000573895 MTMR1Q13613 665 aa16.37■□□□□ 0.21
ABR-223ENST00000573895 PTGISQ16647 500 aa16.37■□□□□ 0.21
ABR-223ENST00000573895 KIAA0753Q2KHM9 967 aa16.37■□□□□ 0.21
ABR-223ENST00000573895 TMEM240Q5SV17 173 aa16.37■□□□□ 0.21
ABR-223ENST00000573895 FAM109BQ6ICB4 259 aaPredicted RBP16.37■□□□□ 0.21
ABR-223ENST00000573895 C16orf59Q7L2K0 433 aa16.37■□□□□ 0.21
ABR-223ENST00000573895 CCDC155Q8N6L0 562 aa16.37■□□□□ 0.21
ABR-223ENST00000573895 CCDC148Q8NFR7 591 aa16.37■□□□□ 0.21
ABR-223ENST00000573895 CAGE1Q8TC20 777 aa16.37■□□□□ 0.21
ABR-223ENST00000573895 BICD2Q8TD16 824 aa16.37■□□□□ 0.21
ABR-223ENST00000573895 PHKBQ93100 1093 aa16.37■□□□□ 0.21
ABR-223ENST00000573895 RNPC3Q96LT9 517 aaKnown RBP16.37■□□□□ 0.21
ABR-223ENST00000573895 GPR20Q99678 358 aa16.37■□□□□ 0.21
ABR-223ENST00000573895 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.37■□□□□ 0.21
ABR-223ENST00000573895 WNT8AQ9H1J5 351 aa16.37■□□□□ 0.21
ABR-223ENST00000573895 C6orf50Q9HD87 102 aa16.37■□□□□ 0.21
ABR-223ENST00000573895 NOD1Q9Y239 953 aa16.37■□□□□ 0.21
ABR-223ENST00000573895 UMODL1Q5DID0 1318 aa16.37■□□□□ 0.21
ABR-223ENST00000573895 H3BRB1 525 aa16.36■□□□□ 0.21
ABR-223ENST00000573895 PFKMP08237 780 aa16.36■□□□□ 0.21
ABR-223ENST00000573895 ZNF286BP0CG31 522 aa16.36■□□□□ 0.21
ABR-223ENST00000573895 CYP2C9P11712 490 aa16.36■□□□□ 0.21
ABR-223ENST00000573895 FDPSP14324 419 aaKnown RBP16.36■□□□□ 0.21
ABR-223ENST00000573895 RFC2P35250 354 aa16.36■□□□□ 0.21
ABR-223ENST00000573895 NUCB2P80303 420 aa16.36■□□□□ 0.21
ABR-223ENST00000573895 RBL2Q08999 1139 aa16.36■□□□□ 0.21
ABR-223ENST00000573895 CEP55Q53EZ4 464 aa16.36■□□□□ 0.21
ABR-223ENST00000573895 RASIP1Q5U651 963 aa16.36■□□□□ 0.21
ABR-223ENST00000573895 LARP1BQ659C4 914 aaKnown RBP16.36■□□□□ 0.21
ABR-223ENST00000573895 GDF6Q6KF10 455 aaPredicted RBP16.36■□□□□ 0.21
ABR-223ENST00000573895 MXRA8Q9BRK3 442 aa16.36■□□□□ 0.21
ABR-223ENST00000573895 SLC26A6Q9BXS9 759 aa16.36■□□□□ 0.21
ABR-223ENST00000573895 TUT1Q9H6E5 874 aaKnown RBP16.36■□□□□ 0.21
ABR-223ENST00000573895 BCAS3Q9H6U6 928 aa16.36■□□□□ 0.21
ABR-223ENST00000573895 CHMP5Q9NZZ3 219 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms