RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 NAB2Q15742 525 aa19.23■□□□□ 0.67
SCARF1-205ENST00000571272 C16orf86Q6ZW13 317 aa19.23■□□□□ 0.67
SCARF1-205ENST00000571272 LRRC47Q8N1G4 583 aaKnown RBP19.23■□□□□ 0.67
SCARF1-205ENST00000571272 CDCA7Q9BWT1 371 aaPredicted RBP19.23■□□□□ 0.67
SCARF1-205ENST00000571272 RTFDC1Q9BY42 306 aaPredicted RBP19.23■□□□□ 0.67
SCARF1-205ENST00000571272 PANK4Q9NVE7 773 aa19.23■□□□□ 0.67
SCARF1-205ENST00000571272 ATP6V0A2Q9Y487 856 aa19.23■□□□□ 0.67
SCARF1-205ENST00000571272 RBAK-RBAKDNI3L0D1 243 aa19.23■□□□□ 0.67
SCARF1-205ENST00000571272 MARCH6O60337 910 aa19.23■□□□□ 0.67
SCARF1-205ENST00000571272 NT5C2P49902 561 aa19.23■□□□□ 0.67
SCARF1-205ENST00000571272 FAM26FQ5R3K3 315 aa19.23■□□□□ 0.67
SCARF1-205ENST00000571272 FBXW10Q5XX13 1052 aa19.23■□□□□ 0.67
SCARF1-205ENST00000571272 TPTE2Q6XPS3 522 aa19.23■□□□□ 0.67
SCARF1-205ENST00000571272 DNAAF5Q86Y56 855 aa19.23■□□□□ 0.67
SCARF1-205ENST00000571272 DNAJC19Q96DA6 116 aa19.23■□□□□ 0.67
SCARF1-205ENST00000571272 EDEM3Q9BZQ6 932 aa19.23■□□□□ 0.67
SCARF1-205ENST00000571272 GOLPH3Q9H4A6 298 aa19.23■□□□□ 0.67
SCARF1-205ENST00000571272 ZCWPW2Q504Y3 356 aa19.22■□□□□ 0.67
SCARF1-205ENST00000571272 CLEC10AQ8IUN9 316 aa19.22■□□□□ 0.67
SCARF1-205ENST00000571272 PIK3R5Q8WYR1 880 aa19.22■□□□□ 0.67
SCARF1-205ENST00000571272 GPCPD1Q9NPB8 672 aa19.22■□□□□ 0.67
SCARF1-205ENST00000571272 NPHP3-ACAD11A0A0J9YXS1 232 aa19.22■□□□□ 0.67
SCARF1-205ENST00000571272 LDHCP07864 332 aa19.22■□□□□ 0.67
SCARF1-205ENST00000571272 INPP5BP32019 993 aa19.22■□□□□ 0.67
SCARF1-205ENST00000571272 PSMD2Q13200 908 aa19.22■□□□□ 0.67
SCARF1-205ENST00000571272 PDIA5Q14554 519 aa19.22■□□□□ 0.67
SCARF1-205ENST00000571272 PROCA1Q8NCQ7 364 aaPredicted RBP19.22■□□□□ 0.67
SCARF1-205ENST00000571272 RNF14Q9UBS8 474 aa19.22■□□□□ 0.67
SCARF1-205ENST00000571272 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.22■□□□□ 0.67
SCARF1-205ENST00000571272 PDHBP11177 359 aa19.22■□□□□ 0.67
SCARF1-205ENST00000571272 KLHL30Q0D2K2 578 aa19.22■□□□□ 0.67
SCARF1-205ENST00000571272 SLC18A3Q16572 532 aa19.22■□□□□ 0.67
SCARF1-205ENST00000571272 TMEM119Q4V9L6 283 aa19.22■□□□□ 0.67
SCARF1-205ENST00000571272 PROM2Q8N271 834 aa19.22■□□□□ 0.67
SCARF1-205ENST00000571272 RIOX1Q9H6W3 641 aa19.22■□□□□ 0.67
SCARF1-205ENST00000571272 LUC7LQ9NQ29 371 aaKnown RBP19.22■□□□□ 0.67
SCARF1-205ENST00000571272 ESYT2A0FGR8 921 aa19.21■□□□□ 0.67
SCARF1-205ENST00000571272 RAD51CO43502 376 aa19.21■□□□□ 0.67
SCARF1-205ENST00000571272 ORC2Q13416 577 aaPredicted RBP19.21■□□□□ 0.67
SCARF1-205ENST00000571272 MEI1Q5TIA1 1274 aa19.21■□□□□ 0.67
SCARF1-205ENST00000571272 CENPHQ9H3R5 247 aa19.21■□□□□ 0.67
SCARF1-205ENST00000571272 E9PMD0 336 aa19.21■□□□□ 0.67
SCARF1-205ENST00000571272 INPP4AQ96PE3 977 aaPredicted RBP19.21■□□□□ 0.67
SCARF1-205ENST00000571272 ZHX3Q9H4I2 956 aa19.21■□□□□ 0.67
SCARF1-205ENST00000571272 MAST2Q6P0Q8 1798 aa19.21■□□□□ 0.67
SCARF1-205ENST00000571272 LSP1P33241 339 aa19.2■□□□□ 0.66
SCARF1-205ENST00000571272 MAATS1Q7Z4T9 603 aa19.2■□□□□ 0.66
SCARF1-205ENST00000571272 HAS1Q92839 578 aa19.2■□□□□ 0.66
SCARF1-205ENST00000571272 NUCKS1Q9H1E3 243 aaKnown RBP19.2■□□□□ 0.66
SCARF1-205ENST00000571272 GRID2IPA4D2P6 1211 aa19.2■□□□□ 0.66
SCARF1-205ENST00000571272 KCNK3O14649 394 aa19.2■□□□□ 0.66
SCARF1-205ENST00000571272 HLTFQ14527 1009 aaKnown RBP eCLIP19.2■□□□□ 0.66
SCARF1-205ENST00000571272 MMS22LQ6ZRQ5 1243 aa19.2■□□□□ 0.66
SCARF1-205ENST00000571272 LRRC27Q9C0I9 530 aa19.2■□□□□ 0.66
SCARF1-205ENST00000571272 DDX25Q9UHL0 483 aaKnown RBP19.2■□□□□ 0.66
SCARF1-205ENST00000571272 PCDHGC5Q9Y5F6 944 aa19.2■□□□□ 0.66
SCARF1-205ENST00000571272 ACTN1P12814 892 aa19.19■□□□□ 0.66
SCARF1-205ENST00000571272 NR1D1P20393 614 aa19.19■□□□□ 0.66
SCARF1-205ENST00000571272 EPS15P42566 896 aa19.19■□□□□ 0.66
SCARF1-205ENST00000571272 SEC24CP53992 1094 aa19.19■□□□□ 0.66
SCARF1-205ENST00000571272 CDC37Q16543 378 aaPredicted RBP19.19■□□□□ 0.66
SCARF1-205ENST00000571272 PTF1AQ7RTS3 328 aa19.19■□□□□ 0.66
SCARF1-205ENST00000571272 SYN2Q92777 582 aaPredicted RBP19.19■□□□□ 0.66
SCARF1-205ENST00000571272 NARFQ9UHQ1 456 aa19.19■□□□□ 0.66
SCARF1-205ENST00000571272 HERC4Q5GLZ8 1057 aaPredicted RBP19.19■□□□□ 0.66
SCARF1-205ENST00000571272 CEP85LQ5SZL2 805 aa19.19■□□□□ 0.66
SCARF1-205ENST00000571272 KDM7AQ6ZMT4 941 aa19.19■□□□□ 0.66
SCARF1-205ENST00000571272 BMP2KQ9NSY1 1161 aaPredicted RBP19.19■□□□□ 0.66
SCARF1-205ENST00000571272 KIAA1024Q9UPX6 916 aa19.19■□□□□ 0.66
SCARF1-205ENST00000571272 HPDP32754 393 aaPredicted RBP19.18■□□□□ 0.66
SCARF1-205ENST00000571272 ASIC2Q16515 512 aa19.18■□□□□ 0.66
SCARF1-205ENST00000571272 TRIM59Q8IWR1 403 aa19.18■□□□□ 0.66
SCARF1-205ENST00000571272 USP38Q8NB14 1042 aa19.18■□□□□ 0.66
SCARF1-205ENST00000571272 PCDHA12Q9UN75 941 aa19.18■□□□□ 0.66
SCARF1-205ENST00000571272 ROBO1Q9Y6N7 1651 aa19.18■□□□□ 0.66
SCARF1-205ENST00000571272 SMARCA1P28370 1054 aa19.18■□□□□ 0.66
SCARF1-205ENST00000571272 ADAM9Q13443 819 aa19.18■□□□□ 0.66
SCARF1-205ENST00000571272 ZNF804AQ7Z570 1209 aa19.18■□□□□ 0.66
SCARF1-205ENST00000571272 TAF4BQ92750 862 aa19.18■□□□□ 0.66
SCARF1-205ENST00000571272 PLAAQ9Y263 795 aa19.18■□□□□ 0.66
SCARF1-205ENST00000571272 CAPN7Q9Y6W3 813 aa19.18■□□□□ 0.66
SCARF1-205ENST00000571272 NAV1Q8NEY1 1877 aa19.18■□□□□ 0.66
SCARF1-205ENST00000571272 GNPATO15228 680 aa19.18■□□□□ 0.66
SCARF1-205ENST00000571272 DDX42Q86XP3 938 aaKnown RBP eCLIP19.18■□□□□ 0.66
SCARF1-205ENST00000571272 B4GALNT4Q76KP1 1039 aa19.17■□□□□ 0.66
SCARF1-205ENST00000571272 OR2W6PQ8NHA6 318 aa19.17■□□□□ 0.66
SCARF1-205ENST00000571272 SCFD1Q8WVM8 642 aa19.17■□□□□ 0.66
SCARF1-205ENST00000571272 ATP6V1G3Q96LB4 118 aa19.17■□□□□ 0.66
SCARF1-205ENST00000571272 A6NNZ2 444 aa19.17■□□□□ 0.66
SCARF1-205ENST00000571272 KIAA0754O94854 1291 aa19.17■□□□□ 0.66
SCARF1-205ENST00000571272 TNNC1P63316 161 aa19.17■□□□□ 0.66
SCARF1-205ENST00000571272 PTK2Q05397 1052 aa19.17■□□□□ 0.66
SCARF1-205ENST00000571272 KCNH2Q12809 1159 aa19.17■□□□□ 0.66
SCARF1-205ENST00000571272 RPS6KA1Q15418 735 aa19.17■□□□□ 0.66
SCARF1-205ENST00000571272 TUBB8Q3ZCM7 444 aa19.17■□□□□ 0.66
SCARF1-205ENST00000571272 TTBK2Q6IQ55 1244 aa19.17■□□□□ 0.66
SCARF1-205ENST00000571272 OTUD6BQ8N6M0 293 aa19.17■□□□□ 0.66
SCARF1-205ENST00000571272 AP1M1Q9BXS5 423 aa19.17■□□□□ 0.66
SCARF1-205ENST00000571272 EPN3Q9H201 632 aa19.17■□□□□ 0.66
SCARF1-205ENST00000571272 POTEB3A0JP26 581 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms