RNA–Protein interactions for RNA: ENST00000570749.5

TRIM25-204, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-204ENST00000570749 GRIN2CQ14957 1233 aa11.13□□□□□ -0.63
TRIM25-204ENST00000570749 RTN1Q16799 776 aa11.13□□□□□ -0.63
TRIM25-204ENST00000570749 PPP2R2DQ66LE6 453 aa11.13□□□□□ -0.63
TRIM25-204ENST00000570749 DEFB128Q7Z7B8 93 aa11.13□□□□□ -0.63
TRIM25-204ENST00000570749 SERINC5Q86VE9 423 aa11.13□□□□□ -0.63
TRIM25-204ENST00000570749 FBXL16Q8N461 479 aa11.13□□□□□ -0.63
TRIM25-204ENST00000570749 SYMPKQ92797 1274 aaKnown RBP11.13□□□□□ -0.63
TRIM25-204ENST00000570749 C16orf70Q9BSU1 422 aa11.13□□□□□ -0.63
TRIM25-204ENST00000570749 ALG1Q9BT22 464 aa11.13□□□□□ -0.63
TRIM25-204ENST00000570749 C17orf102A2RUQ5 167 aa11.12□□□□□ -0.63
TRIM25-204ENST00000570749 FGD1P98174 961 aa11.12□□□□□ -0.63
TRIM25-204ENST00000570749 EXOSC10Q01780 885 aaKnown RBP11.12□□□□□ -0.63
TRIM25-204ENST00000570749 SP2Q02086 613 aa11.12□□□□□ -0.63
TRIM25-204ENST00000570749 AP3B2Q13367 1082 aa11.12□□□□□ -0.63
TRIM25-204ENST00000570749 USP17L6PQ6QN14 398 aa11.12□□□□□ -0.63
TRIM25-204ENST00000570749 FAM43BQ6ZT52 329 aaPredicted RBP11.12□□□□□ -0.63
TRIM25-204ENST00000570749 CCDC12Q8WUD4 166 aaPredicted RBP11.12□□□□□ -0.63
TRIM25-204ENST00000570749 PIBF1Q8WXW3 757 aa11.12□□□□□ -0.63
TRIM25-204ENST00000570749 VWCEQ96DN2 955 aa11.12□□□□□ -0.63
TRIM25-204ENST00000570749 CTAGE1Q96RT6 745 aa11.12□□□□□ -0.63
TRIM25-204ENST00000570749 GPR20Q99678 358 aa11.12□□□□□ -0.63
TRIM25-204ENST00000570749 NID2Q14112 1375 aa11.12□□□□□ -0.63
TRIM25-204ENST00000570749 CNTNAP5Q8WYK1 1306 aa11.11□□□□□ -0.63
TRIM25-204ENST00000570749 NRCAMQ92823 1304 aa11.11□□□□□ -0.63
TRIM25-204ENST00000570749 PTPRSQ13332 1948 aa11.11□□□□□ -0.63
TRIM25-204ENST00000570749 GRXCR1A8MXD5 290 aa11.11□□□□□ -0.63
TRIM25-204ENST00000570749 PSMA5P28066 241 aa11.11□□□□□ -0.63
TRIM25-204ENST00000570749 PBX2P40425 430 aa11.11□□□□□ -0.63
TRIM25-204ENST00000570749 NAPAP54920 295 aa11.11□□□□□ -0.63
TRIM25-204ENST00000570749 MTMR1Q13613 665 aa11.11□□□□□ -0.63
TRIM25-204ENST00000570749 IKBKEQ14164 716 aa11.11□□□□□ -0.63
TRIM25-204ENST00000570749 CYFIP1Q7L576 1253 aa11.11□□□□□ -0.63
TRIM25-204ENST00000570749 HEATR3Q7Z4Q2 680 aa11.11□□□□□ -0.63
TRIM25-204ENST00000570749 HERC6Q8IVU3 1022 aa11.11□□□□□ -0.63
TRIM25-204ENST00000570749 DHX38Q92620 1227 aaKnown RBP11.11□□□□□ -0.63
TRIM25-204ENST00000570749 KCNB2Q92953 911 aa11.11□□□□□ -0.63
TRIM25-204ENST00000570749 ATP6V0A1Q93050 837 aa11.11□□□□□ -0.63
TRIM25-204ENST00000570749 TSPYL2Q9H2G4 693 aaPredicted RBP11.11□□□□□ -0.63
TRIM25-204ENST00000570749 NKX2-4Q9H2Z4 354 aa11.11□□□□□ -0.63
TRIM25-204ENST00000570749 RIC8AQ9NPQ8 531 aa11.11□□□□□ -0.63
TRIM25-204ENST00000570749 KLF18A0A0U1RQI7 1052 aa11.1□□□□□ -0.63
TRIM25-204ENST00000570749 GOLGA8AA7E2F4 631 aa11.1□□□□□ -0.63
TRIM25-204ENST00000570749 GOLGA8BA8MQT2 603 aa11.1□□□□□ -0.63
TRIM25-204ENST00000570749 SMIM10L2AP0DMW4 78 aa11.1□□□□□ -0.63
TRIM25-204ENST00000570749 SMIM10L2BP0DMW5 78 aa11.1□□□□□ -0.63
TRIM25-204ENST00000570749 RXRAP19793 462 aa11.1□□□□□ -0.63
TRIM25-204ENST00000570749 POU3F3P20264 500 aaPredicted RBP11.1□□□□□ -0.63
TRIM25-204ENST00000570749 HSPA4P34932 840 aa11.1□□□□□ -0.63
TRIM25-204ENST00000570749 ADCY7P51828 1080 aa11.1□□□□□ -0.63
TRIM25-204ENST00000570749 SEMA3FQ13275 785 aa11.1□□□□□ -0.63
TRIM25-204ENST00000570749 TRIM71Q2Q1W2 868 aaKnown RBP11.1□□□□□ -0.63
TRIM25-204ENST00000570749 TAF2Q6P1X5 1199 aa11.1□□□□□ -0.63
TRIM25-204ENST00000570749 BLOC1S2Q6QNY1 142 aa11.1□□□□□ -0.63
TRIM25-204ENST00000570749 RPAINQ86UA6 219 aa11.1□□□□□ -0.63
TRIM25-204ENST00000570749 SEPT1Q8WYJ6 367 aa11.1□□□□□ -0.63
TRIM25-204ENST00000570749 APBB2Q92870 758 aa11.1□□□□□ -0.63
TRIM25-204ENST00000570749 LRRC2Q9BYS8 371 aa11.1□□□□□ -0.63
TRIM25-204ENST00000570749 JADE2Q9NQC1 790 aa11.1□□□□□ -0.63
TRIM25-204ENST00000570749 BARHL2Q9NY43 387 aa11.1□□□□□ -0.63
TRIM25-204ENST00000570749 ERAP1Q9NZ08 941 aa11.1□□□□□ -0.63
TRIM25-204ENST00000570749 RTEL1Q9NZ71 1219 aa11.1□□□□□ -0.63
TRIM25-204ENST00000570749 PCDHA6Q9UN73 950 aa11.1□□□□□ -0.63
TRIM25-204ENST00000570749 YBX2Q9Y2T7 364 aaKnown RBP11.1□□□□□ -0.63
TRIM25-204ENST00000570749 PCDHA8Q9Y5H6 950 aa11.1□□□□□ -0.63
TRIM25-204ENST00000570749 UBIAD1Q9Y5Z9 338 aa11.1□□□□□ -0.63
TRIM25-204ENST00000570749 COL4A6Q14031 1691 aa11.1□□□□□ -0.63
TRIM25-204ENST00000570749 VCANP13611 3396 aa11.1□□□□□ -0.63
TRIM25-204ENST00000570749 NFASCO94856 1347 aa11.09□□□□□ -0.63
TRIM25-204ENST00000570749 SIP14410 1827 aa11.09□□□□□ -0.63
TRIM25-204ENST00000570749 ESYT2A0FGR8 921 aa11.09□□□□□ -0.63
TRIM25-204ENST00000570749 RSPH10B2B2RC85 870 aa11.09□□□□□ -0.63
TRIM25-204ENST00000570749 GTPBP6O43824 516 aaPredicted RBP11.09□□□□□ -0.63
TRIM25-204ENST00000570749 TLL1O43897 1013 aa11.09□□□□□ -0.63
TRIM25-204ENST00000570749 EIF5BO60841 1220 aaKnown RBP11.09□□□□□ -0.63
TRIM25-204ENST00000570749 LGR5O75473 907 aa11.09□□□□□ -0.63
TRIM25-204ENST00000570749 RSPH10BP0C881 870 aa11.09□□□□□ -0.63
TRIM25-204ENST00000570749 KCNA2P16389 499 aa11.09□□□□□ -0.63
TRIM25-204ENST00000570749 TCF7P36402 384 aaPredicted RBP11.09□□□□□ -0.63
TRIM25-204ENST00000570749 SLC26A2P50443 739 aa11.09□□□□□ -0.63
TRIM25-204ENST00000570749 METAP2P50579 478 aaKnown RBP eCLIP11.09□□□□□ -0.63
TRIM25-204ENST00000570749 WDR5P61964 334 aaKnown RBP11.09□□□□□ -0.63
TRIM25-204ENST00000570749 ERICH6BQ5W0A0 696 aa11.09□□□□□ -0.63
TRIM25-204ENST00000570749 NIPA1Q7RTP0 329 aa11.09□□□□□ -0.63
TRIM25-204ENST00000570749 RSPH3Q86UC2 560 aa11.09□□□□□ -0.63
TRIM25-204ENST00000570749 CMTR1Q8N1G2 835 aaKnown RBP11.09□□□□□ -0.63
TRIM25-204ENST00000570749 CCDC82Q8N4S0 544 aa11.09□□□□□ -0.63
TRIM25-204ENST00000570749 ATXN2LQ8WWM7 1075 aaKnown RBP11.09□□□□□ -0.63
TRIM25-204ENST00000570749 GPKOWQ92917 476 aaPredicted RBP eCLIP11.09□□□□□ -0.63
TRIM25-204ENST00000570749 SMARCAD1Q9H4L7 1026 aa11.09□□□□□ -0.63
TRIM25-204ENST00000570749 PRDM12Q9H4Q4 367 aa11.09□□□□□ -0.63
TRIM25-204ENST00000570749 RALGAPA2Q2PPJ7 1873 aa11.08□□□□□ -0.64
TRIM25-204ENST00000570749 NBNO60934 754 aa11.08□□□□□ -0.64
TRIM25-204ENST00000570749 GJB5O95377 273 aa11.08□□□□□ -0.64
TRIM25-204ENST00000570749 CA3P07451 260 aa11.08□□□□□ -0.64
TRIM25-204ENST00000570749 ITGB5P18084 799 aa11.08□□□□□ -0.64
TRIM25-204ENST00000570749 GNA11P29992 359 aa11.08□□□□□ -0.64
TRIM25-204ENST00000570749 THPOP40225 353 aa11.08□□□□□ -0.64
TRIM25-204ENST00000570749 FUT2Q10981 343 aa11.08□□□□□ -0.64
TRIM25-204ENST00000570749 PFKFB3Q16875 520 aaPredicted RBP11.08□□□□□ -0.64
TRIM25-204ENST00000570749 ADCK5Q3MIX3 580 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms