RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 CKBP12277 381 aa19.62■□□□□ 0.73
MAP1LC3B-208ENST00000570189 FOSL2P15408 326 aa19.62■□□□□ 0.73
MAP1LC3B-208ENST00000570189 WWC2Q6AWC2 1192 aa19.62■□□□□ 0.73
MAP1LC3B-208ENST00000570189 LRRC8DQ7L1W4 858 aa19.62■□□□□ 0.73
MAP1LC3B-208ENST00000570189 CYFIP1Q7L576 1253 aa19.62■□□□□ 0.73
MAP1LC3B-208ENST00000570189 SERINC5Q86VE9 423 aa19.62■□□□□ 0.73
MAP1LC3B-208ENST00000570189 ALG1Q9BT22 464 aa19.62■□□□□ 0.73
MAP1LC3B-208ENST00000570189 GLT8D2Q9H1C3 349 aa19.62■□□□□ 0.73
MAP1LC3B-208ENST00000570189 RIC8AQ9NPQ8 531 aa19.62■□□□□ 0.73
MAP1LC3B-208ENST00000570189 UBIAD1Q9Y5Z9 338 aa19.62■□□□□ 0.73
MAP1LC3B-208ENST00000570189 TRANK1O15050 2925 aa19.62■□□□□ 0.73
MAP1LC3B-208ENST00000570189 SPDYE3A6NKU9 549 aa19.61■□□□□ 0.73
MAP1LC3B-208ENST00000570189 NOP56O00567 594 aaKnown RBP19.61■□□□□ 0.73
MAP1LC3B-208ENST00000570189 ATP2A2P16615 1042 aaKnown RBP19.61■□□□□ 0.73
MAP1LC3B-208ENST00000570189 TRAF7Q6Q0C0 670 aa19.61■□□□□ 0.73
MAP1LC3B-208ENST00000570189 HEATR3Q7Z4Q2 680 aa19.61■□□□□ 0.73
MAP1LC3B-208ENST00000570189 DEFB128Q7Z7B8 93 aa19.61■□□□□ 0.73
MAP1LC3B-208ENST00000570189 RAB11FIP4Q86YS3 637 aa19.61■□□□□ 0.73
MAP1LC3B-208ENST00000570189 MAFAQ8NHW3 353 aaPredicted RBP19.61■□□□□ 0.73
MAP1LC3B-208ENST00000570189 ZFP91Q96JP5 570 aaPredicted RBP19.61■□□□□ 0.73
MAP1LC3B-208ENST00000570189 TCEANC2Q96MN5 208 aa19.61■□□□□ 0.73
MAP1LC3B-208ENST00000570189 BCAS3Q9H6U6 928 aa19.61■□□□□ 0.73
MAP1LC3B-208ENST00000570189 EHMT1Q9H9B1 1298 aa19.61■□□□□ 0.73
MAP1LC3B-208ENST00000570189 RTEL1Q9NZ71 1219 aa19.61■□□□□ 0.73
MAP1LC3B-208ENST00000570189 YBX2Q9Y2T7 364 aaKnown RBP19.61■□□□□ 0.73
MAP1LC3B-208ENST00000570189 MICAL3Q7RTP6 2002 aa19.61■□□□□ 0.73
MAP1LC3B-208ENST00000570189 KLF18A0A0U1RQI7 1052 aa19.6■□□□□ 0.73
MAP1LC3B-208ENST00000570189 CCDC196A0A1B0GTZ2 297 aa19.6■□□□□ 0.73
MAP1LC3B-208ENST00000570189 hCG_1642624A0A1W2PR95 340 aa19.6■□□□□ 0.73
MAP1LC3B-208ENST00000570189 GOLGA8AA7E2F4 631 aa19.6■□□□□ 0.73
MAP1LC3B-208ENST00000570189 GOLGA8BA8MQT2 603 aa19.6■□□□□ 0.73
MAP1LC3B-208ENST00000570189 CAND2O75155 1236 aa19.6■□□□□ 0.73
MAP1LC3B-208ENST00000570189 FOSP01100 380 aaPredicted RBP19.6■□□□□ 0.73
MAP1LC3B-208ENST00000570189 KCNA2P16389 499 aa19.6■□□□□ 0.73
MAP1LC3B-208ENST00000570189 ITGB5P18084 799 aa19.6■□□□□ 0.73
MAP1LC3B-208ENST00000570189 HIC1Q14526 733 aa19.6■□□□□ 0.73
MAP1LC3B-208ENST00000570189 CCDC82Q8N4S0 544 aa19.6■□□□□ 0.73
MAP1LC3B-208ENST00000570189 BARHL2Q9NY43 387 aa19.6■□□□□ 0.73
MAP1LC3B-208ENST00000570189 PCDHA6Q9UN73 950 aa19.6■□□□□ 0.73
MAP1LC3B-208ENST00000570189 PCDHA8Q9Y5H6 950 aa19.6■□□□□ 0.73
MAP1LC3B-208ENST00000570189 SNX14Q9Y5W7 946 aa19.6■□□□□ 0.73
MAP1LC3B-208ENST00000570189 ZBBXA8MT70 800 aa19.59■□□□□ 0.73
MAP1LC3B-208ENST00000570189 STXBP3O00186 592 aa19.59■□□□□ 0.73
MAP1LC3B-208ENST00000570189 EVCP57679 992 aa19.59■□□□□ 0.73
MAP1LC3B-208ENST00000570189 CHMP4BP1P59074 171 aa19.59■□□□□ 0.73
MAP1LC3B-208ENST00000570189 ADAM17P78536 824 aa19.59■□□□□ 0.73
MAP1LC3B-208ENST00000570189 TYW1BQ6NUM6 668 aa19.59■□□□□ 0.73
MAP1LC3B-208ENST00000570189 CNKSR3Q6P9H4 555 aa19.59■□□□□ 0.73
MAP1LC3B-208ENST00000570189 SLC28A3Q9HAS3 691 aa19.59■□□□□ 0.73
MAP1LC3B-208ENST00000570189 JADE2Q9NQC1 790 aa19.59■□□□□ 0.73
MAP1LC3B-208ENST00000570189 ZNF215Q9UL58 517 aaPredicted RBP19.59■□□□□ 0.73
MAP1LC3B-208ENST00000570189 EMSYQ7Z589 1322 aa19.58■□□□□ 0.73
MAP1LC3B-208ENST00000570189 C17orf102A2RUQ5 167 aa19.58■□□□□ 0.72
MAP1LC3B-208ENST00000570189 NBNO60934 754 aa19.58■□□□□ 0.72
MAP1LC3B-208ENST00000570189 EFCAB14O75071 495 aa19.58■□□□□ 0.72
MAP1LC3B-208ENST00000570189 SMIM10L2AP0DMW4 78 aa19.58■□□□□ 0.72
MAP1LC3B-208ENST00000570189 SMIM10L2BP0DMW5 78 aa19.58■□□□□ 0.72
MAP1LC3B-208ENST00000570189 CDC27P30260 824 aa19.58■□□□□ 0.72
MAP1LC3B-208ENST00000570189 CLK2P49760 499 aaKnown RBP19.58■□□□□ 0.72
MAP1LC3B-208ENST00000570189 NAPAP54920 295 aa19.58■□□□□ 0.72
MAP1LC3B-208ENST00000570189 AP3B2Q13367 1082 aa19.58■□□□□ 0.72
MAP1LC3B-208ENST00000570189 MTMR1Q13613 665 aa19.58■□□□□ 0.72
MAP1LC3B-208ENST00000570189 UBE2SQ16763 222 aa19.58■□□□□ 0.72
MAP1LC3B-208ENST00000570189 BLOC1S2Q6QNY1 142 aa19.58■□□□□ 0.72
MAP1LC3B-208ENST00000570189 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.58■□□□□ 0.72
MAP1LC3B-208ENST00000570189 WNT8BQ93098 351 aa19.58■□□□□ 0.72
MAP1LC3B-208ENST00000570189 JAKMIP1Q96N16 626 aaKnown RBP19.58■□□□□ 0.72
MAP1LC3B-208ENST00000570189 NKX2-4Q9H2Z4 354 aa19.58■□□□□ 0.72
MAP1LC3B-208ENST00000570189 V9GY48 417 aaPredicted RBP19.58■□□□□ 0.72
MAP1LC3B-208ENST00000570189 ABHD14A-ACY1A0A1B0GW23 586 aa19.57■□□□□ 0.72
MAP1LC3B-208ENST00000570189 ESYT2A0FGR8 921 aa19.57■□□□□ 0.72
MAP1LC3B-208ENST00000570189 SORBS3O60504 671 aa19.57■□□□□ 0.72
MAP1LC3B-208ENST00000570189 ATP9AO75110 1047 aa19.57■□□□□ 0.72
MAP1LC3B-208ENST00000570189 GNAT1P11488 350 aa19.57■□□□□ 0.72
MAP1LC3B-208ENST00000570189 PSMA5P28066 241 aa19.57■□□□□ 0.72
MAP1LC3B-208ENST00000570189 PFKFB3Q16875 520 aaPredicted RBP19.57■□□□□ 0.72
MAP1LC3B-208ENST00000570189 Q6ZUG5 572 aa19.57■□□□□ 0.72
MAP1LC3B-208ENST00000570189 GAS2L1Q99501 681 aaPredicted RBP19.57■□□□□ 0.72
MAP1LC3B-208ENST00000570189 FTOQ9C0B1 505 aaKnown RBP eCLIP19.57■□□□□ 0.72
MAP1LC3B-208ENST00000570189 RNPEPQ9H4A4 650 aa19.57■□□□□ 0.72
MAP1LC3B-208ENST00000570189 RPS6KB1P23443 525 aa19.56■□□□□ 0.72
MAP1LC3B-208ENST00000570189 METAP2P50579 478 aaKnown RBP eCLIP19.56■□□□□ 0.72
MAP1LC3B-208ENST00000570189 ADCY7P51828 1080 aa19.56■□□□□ 0.72
MAP1LC3B-208ENST00000570189 ZNF200P98182 395 aaPredicted RBP19.56■□□□□ 0.72
MAP1LC3B-208ENST00000570189 MKRN4PQ13434 485 aaPredicted RBP19.56■□□□□ 0.72
MAP1LC3B-208ENST00000570189 MBTPS1Q14703 1052 aa19.56■□□□□ 0.72
MAP1LC3B-208ENST00000570189 ZNF618Q5T7W0 954 aa19.56■□□□□ 0.72
MAP1LC3B-208ENST00000570189 ERICH6BQ5W0A0 696 aa19.56■□□□□ 0.72
MAP1LC3B-208ENST00000570189 RPAINQ86UA6 219 aa19.56■□□□□ 0.72
MAP1LC3B-208ENST00000570189 HERC6Q8IVU3 1022 aa19.56■□□□□ 0.72
MAP1LC3B-208ENST00000570189 ATP6V0A1Q93050 837 aa19.56■□□□□ 0.72
MAP1LC3B-208ENST00000570189 SIP14410 1827 aa19.55■□□□□ 0.72
MAP1LC3B-208ENST00000570189 NFASCO94856 1347 aa19.55■□□□□ 0.72
MAP1LC3B-208ENST00000570189 NRCAMQ92823 1304 aa19.55■□□□□ 0.72
MAP1LC3B-208ENST00000570189 SREBF1P36956 1147 aa19.55■□□□□ 0.72
MAP1LC3B-208ENST00000570189 RABGGTBP53611 331 aa19.55■□□□□ 0.72
MAP1LC3B-208ENST00000570189 WDR5P61964 334 aaKnown RBP19.55■□□□□ 0.72
MAP1LC3B-208ENST00000570189 FGD1P98174 961 aa19.55■□□□□ 0.72
MAP1LC3B-208ENST00000570189 PPP2R2DQ66LE6 453 aa19.55■□□□□ 0.72
MAP1LC3B-208ENST00000570189 MCTP2Q6DN12 878 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms