RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 TP53INP1Q96A56 240 aa9.76□□□□□ -0.85
CDH11-216ENST00000569128 TRMT112Q9UI30 125 aaKnown RBP9.76□□□□□ -0.85
CDH11-216ENST00000569128 GDF11O95390 407 aa9.75□□□□□ -0.85
CDH11-216ENST00000569128 S100BP04271 92 aaPredicted RBP9.75□□□□□ -0.85
CDH11-216ENST00000569128 PCCAP05165 728 aaPredicted RBP9.75□□□□□ -0.85
CDH11-216ENST00000569128 FOXO4P98177 505 aa9.75□□□□□ -0.85
CDH11-216ENST00000569128 CDK5R2Q13319 367 aa9.75□□□□□ -0.85
CDH11-216ENST00000569128 ERICH6BQ5W0A0 696 aa9.75□□□□□ -0.85
CDH11-216ENST00000569128 LARP1BQ659C4 914 aaKnown RBP9.75□□□□□ -0.85
CDH11-216ENST00000569128 CEP85Q6P2H3 762 aa9.75□□□□□ -0.85
CDH11-216ENST00000569128 PAOXQ6QHF9 649 aa9.75□□□□□ -0.85
CDH11-216ENST00000569128 SEZ6L2Q6UXD5 910 aa9.75□□□□□ -0.85
CDH11-216ENST00000569128 UNC5AQ6ZN44 842 aa9.75□□□□□ -0.85
CDH11-216ENST00000569128 LILRB2Q8N423 598 aa9.75□□□□□ -0.85
CDH11-216ENST00000569128 ANKRD44Q8N8A2 993 aa9.75□□□□□ -0.85
CDH11-216ENST00000569128 ZBTB38Q8NAP3 1195 aaPredicted RBP9.75□□□□□ -0.85
CDH11-216ENST00000569128 BAHD1Q8TBE0 780 aaPredicted RBP9.75□□□□□ -0.85
CDH11-216ENST00000569128 CYB5D2Q8WUJ1 264 aa9.75□□□□□ -0.85
CDH11-216ENST00000569128 CCDC74BQ96LY2 380 aa9.75□□□□□ -0.85
CDH11-216ENST00000569128 DNAJC7Q99615 494 aa9.75□□□□□ -0.85
CDH11-216ENST00000569128 UTP14AQ9BVJ6 771 aaKnown RBP9.75□□□□□ -0.85
CDH11-216ENST00000569128 BICC1Q9H694 974 aaKnown RBP9.75□□□□□ -0.85
CDH11-216ENST00000569128 KANSL2Q9H9L4 492 aa9.75□□□□□ -0.85
CDH11-216ENST00000569128 TYW1Q9NV66 732 aaKnown RBP9.75□□□□□ -0.85
CDH11-216ENST00000569128 TMEM260Q9NX78 707 aa9.75□□□□□ -0.85
CDH11-216ENST00000569128 PNMA6EA0A0J9YXQ4 647 aa9.74□□□□□ -0.85
CDH11-216ENST00000569128 ESYT3A0FGR9 886 aa9.74□□□□□ -0.85
CDH11-216ENST00000569128 PARP10Q53GL7 1025 aa9.74□□□□□ -0.85
CDH11-216ENST00000569128 STAG1Q8WVM7 1258 aa9.74□□□□□ -0.85
CDH11-216ENST00000569128 MIPEPQ99797 713 aa9.74□□□□□ -0.85
CDH11-216ENST00000569128 C1GALT1Q9NS00 363 aa9.74□□□□□ -0.85
CDH11-216ENST00000569128 RIPOR2Q9Y4F9 1068 aa9.74□□□□□ -0.85
CDH11-216ENST00000569128 POLRMTO00411 1230 aaKnown RBP9.73□□□□□ -0.85
CDH11-216ENST00000569128 IRS4O14654 1257 aaPredicted RBP9.73□□□□□ -0.85
CDH11-216ENST00000569128 RGS13O14921 159 aa9.73□□□□□ -0.85
CDH11-216ENST00000569128 PDPK1O15530 556 aa9.73□□□□□ -0.85
CDH11-216ENST00000569128 ITGB2P05107 769 aa9.73□□□□□ -0.85
CDH11-216ENST00000569128 SERPINB2P05120 415 aa9.73□□□□□ -0.85
CDH11-216ENST00000569128 MMP10P09238 476 aa9.73□□□□□ -0.85
CDH11-216ENST00000569128 GBP1P32455 592 aa9.73□□□□□ -0.85
CDH11-216ENST00000569128 GYS2P54840 703 aa9.73□□□□□ -0.85
CDH11-216ENST00000569128 ATP8B2P98198 1209 aa9.73□□□□□ -0.85
CDH11-216ENST00000569128 RASGRF1Q13972 1273 aa9.73□□□□□ -0.85
CDH11-216ENST00000569128 DDR2Q16832 855 aa9.73□□□□□ -0.85
CDH11-216ENST00000569128 PLA2G4EQ3MJ16 856 aa9.73□□□□□ -0.85
CDH11-216ENST00000569128 LMBR1LQ6UX01 489 aa9.73□□□□□ -0.85
CDH11-216ENST00000569128 PPP1R42Q7Z4L9 355 aa9.73□□□□□ -0.85
CDH11-216ENST00000569128 NBPF5PQ86XG9 351 aaPredicted RBP9.73□□□□□ -0.85
CDH11-216ENST00000569128 CLEC10AQ8IUN9 316 aa9.73□□□□□ -0.85
CDH11-216ENST00000569128 TMEM151AQ8N4L1 468 aa9.73□□□□□ -0.85
CDH11-216ENST00000569128 CELF2-AS1Q8N7Q2 184 aa9.73□□□□□ -0.85
CDH11-216ENST00000569128 MFSD2AQ8NA29 543 aa9.73□□□□□ -0.85
CDH11-216ENST00000569128 PSMG3-AS1Q96PY0 264 aa9.73□□□□□ -0.85
CDH11-216ENST00000569128 CHMP4BQ9H444 224 aaKnown RBP9.73□□□□□ -0.85
CDH11-216ENST00000569128 ST7Q9NRC1 585 aa9.73□□□□□ -0.85
CDH11-216ENST00000569128 FAN1Q9Y2M0 1017 aa9.73□□□□□ -0.85
CDH11-216ENST00000569128 ABCC12Q96J65 1359 aa9.73□□□□□ -0.85
CDH11-216ENST00000569128 IBTKQ9P2D0 1353 aaPredicted RBP9.73□□□□□ -0.85
CDH11-216ENST00000569128 HMX2A2RU54 273 aa9.72□□□□□ -0.85
CDH11-216ENST00000569128 UBOX5O94941 541 aa9.72□□□□□ -0.85
CDH11-216ENST00000569128 ZBTB7AO95365 584 aa9.72□□□□□ -0.85
CDH11-216ENST00000569128 PRR5LQ6MZQ0 368 aa9.72□□□□□ -0.85
CDH11-216ENST00000569128 LETMD1Q6P1Q0 360 aa9.72□□□□□ -0.85
CDH11-216ENST00000569128 C16orf86Q6ZW13 317 aa9.72□□□□□ -0.85
CDH11-216ENST00000569128 RIN3Q8TB24 985 aa9.72□□□□□ -0.85
CDH11-216ENST00000569128 CCDC136Q96JN2 1154 aa9.72□□□□□ -0.85
CDH11-216ENST00000569128 FEZ1Q99689 392 aa9.72□□□□□ -0.85
CDH11-216ENST00000569128 FAM83CQ9BQN1 747 aa9.72□□□□□ -0.85
CDH11-216ENST00000569128 PRDM10Q9NQV6 1147 aa9.72□□□□□ -0.85
CDH11-216ENST00000569128 TPSG1Q9NRR2 321 aa9.72□□□□□ -0.85
CDH11-216ENST00000569128 STOML1Q9UBI4 398 aa9.72□□□□□ -0.85
CDH11-216ENST00000569128 RAXQ9Y2V3 346 aa9.72□□□□□ -0.85
CDH11-216ENST00000569128 QSER1Q2KHR3 1735 aa9.72□□□□□ -0.85
CDH11-216ENST00000569128 SH3TC1Q8TE82 1336 aa9.72□□□□□ -0.85
CDH11-216ENST00000569128 CDHR2Q9BYE9 1310 aa9.72□□□□□ -0.85
CDH11-216ENST00000569128 LTBP3Q9NS15 1303 aa9.72□□□□□ -0.85
CDH11-216ENST00000569128 COL24A1Q17RW2 1714 aa9.71□□□□□ -0.85
CDH11-216ENST00000569128 PDE8AO60658 829 aa9.71□□□□□ -0.86
CDH11-216ENST00000569128 SLITRK5O94991 958 aa9.71□□□□□ -0.86
CDH11-216ENST00000569128 RABL6Q3YEC7 729 aaPredicted RBP9.71□□□□□ -0.86
CDH11-216ENST00000569128 SLC10A5Q5PT55 438 aa9.71□□□□□ -0.86
CDH11-216ENST00000569128 RPAP2Q8IXW5 612 aaPredicted RBP9.71□□□□□ -0.86
CDH11-216ENST00000569128 TOP6BLQ8N6T0 577 aa9.71□□□□□ -0.86
CDH11-216ENST00000569128 KLHDC4Q8TBB5 520 aa9.71□□□□□ -0.86
CDH11-216ENST00000569128 PPP1R13LQ8WUF5 828 aa9.71□□□□□ -0.86
CDH11-216ENST00000569128 PSMD1Q99460 953 aa9.71□□□□□ -0.86
CDH11-216ENST00000569128 PLA2G12BQ9BX93 195 aa9.71□□□□□ -0.86
CDH11-216ENST00000569128 C7orf69Q9H7B7 122 aa9.71□□□□□ -0.86
CDH11-216ENST00000569128 PCDHB10Q9UN67 800 aa9.71□□□□□ -0.86
CDH11-216ENST00000569128 PA2G4Q9UQ80 394 aaKnown RBP9.71□□□□□ -0.86
CDH11-216ENST00000569128 SLC12A7Q9Y666 1083 aa9.71□□□□□ -0.86
CDH11-216ENST00000569128 CARMIL3Q8ND23 1372 aa9.71□□□□□ -0.86
CDH11-216ENST00000569128 SRGAP3O43295 1099 aa9.7□□□□□ -0.86
CDH11-216ENST00000569128 CSF1RP07333 972 aa9.7□□□□□ -0.86
CDH11-216ENST00000569128 PDGFRBP09619 1106 aa9.7□□□□□ -0.86
CDH11-216ENST00000569128 RFX5P48382 616 aaPredicted RBP9.7□□□□□ -0.86
CDH11-216ENST00000569128 CTSWP56202 376 aa9.7□□□□□ -0.86
CDH11-216ENST00000569128 FXNQ16595 210 aa9.7□□□□□ -0.86
CDH11-216ENST00000569128 CDH24Q86UP0 819 aa9.7□□□□□ -0.86
CDH11-216ENST00000569128 SKAP1Q86WV1 359 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms