RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 SLC43A3Q8NBI5 491 aa14.83□□□□□ -0.04
CNOT1-213ENST00000568158 DAGLBQ8NCG7 672 aa14.83□□□□□ -0.04
CNOT1-213ENST00000568158 SENP7Q9BQF6 1050 aa14.83□□□□□ -0.04
CNOT1-213ENST00000568158 KCNH7Q9NS40 1196 aa14.83□□□□□ -0.04
CNOT1-213ENST00000568158 FAM86B1E9PN63 330 aa14.82□□□□□ -0.04
CNOT1-213ENST00000568158 MAFGO15525 162 aa14.82□□□□□ -0.04
CNOT1-213ENST00000568158 PPFIA4O75335 1185 aa14.82□□□□□ -0.04
CNOT1-213ENST00000568158 FAM86B2P0C5J1 330 aa14.82□□□□□ -0.04
CNOT1-213ENST00000568158 SP4Q02446 784 aa14.82□□□□□ -0.04
CNOT1-213ENST00000568158 FAAP100Q0VG06 881 aa14.82□□□□□ -0.04
CNOT1-213ENST00000568158 GALNT17Q6IS24 598 aa14.82□□□□□ -0.04
CNOT1-213ENST00000568158 PLA2G4DQ86XP0 818 aa14.82□□□□□ -0.04
CNOT1-213ENST00000568158 PPTC7Q8NI37 304 aa14.82□□□□□ -0.04
CNOT1-213ENST00000568158 TBCKQ8TEA7 893 aa14.82□□□□□ -0.04
CNOT1-213ENST00000568158 KAT2BQ92831 832 aa14.82□□□□□ -0.04
CNOT1-213ENST00000568158 TMX3Q96JJ7 454 aa14.82□□□□□ -0.04
CNOT1-213ENST00000568158 CDHR1Q96JP9 859 aa14.82□□□□□ -0.04
CNOT1-213ENST00000568158 LLPHQ9BRT6 129 aaKnown RBP14.82□□□□□ -0.04
CNOT1-213ENST00000568158 IGLV3-22A0A075B6J6 115 aa14.81□□□□□ -0.04
CNOT1-213ENST00000568158 TRIM43BA6NCK2 446 aa14.81□□□□□ -0.04
CNOT1-213ENST00000568158 DCDC2CA8MYV0 355 aa14.81□□□□□ -0.04
CNOT1-213ENST00000568158 GUCY1B3Q02153 619 aa14.81□□□□□ -0.04
CNOT1-213ENST00000568158 PRPF38BQ5VTL8 546 aaKnown RBP14.81□□□□□ -0.04
CNOT1-213ENST00000568158 METTL7BQ6UX53 244 aa14.81□□□□□ -0.04
CNOT1-213ENST00000568158 ANKRD33Q7Z3H0 272 aa14.81□□□□□ -0.04
CNOT1-213ENST00000568158 FAM177A1Q8N128 213 aaPredicted RBP14.81□□□□□ -0.04
CNOT1-213ENST00000568158 TRIM43Q96BQ3 446 aaPredicted RBP14.81□□□□□ -0.04
CNOT1-213ENST00000568158 TOX2Q96NM4 488 aa14.81□□□□□ -0.04
CNOT1-213ENST00000568158 GPR20Q99678 358 aa14.81□□□□□ -0.04
CNOT1-213ENST00000568158 AGO4Q9HCK5 861 aaKnown RBP14.81□□□□□ -0.04
CNOT1-213ENST00000568158 PRDM5Q9NQX1 630 aaPredicted RBP14.81□□□□□ -0.04
CNOT1-213ENST00000568158 GSTTP1A0A1W2PQM5 241 aa14.8□□□□□ -0.04
CNOT1-213ENST00000568158 NOP56O00567 594 aaKnown RBP14.8□□□□□ -0.04
CNOT1-213ENST00000568158 ZNF286BP0CG31 522 aa14.8□□□□□ -0.04
CNOT1-213ENST00000568158 CIITAP33076 1130 aa14.8□□□□□ -0.04
CNOT1-213ENST00000568158 PSEN2P49810 448 aa14.8□□□□□ -0.04
CNOT1-213ENST00000568158 USP11P51784 963 aa14.8□□□□□ -0.04
CNOT1-213ENST00000568158 NR5A1Q13285 461 aa14.8□□□□□ -0.04
CNOT1-213ENST00000568158 INF2Q27J81 1249 aa14.8□□□□□ -0.04
CNOT1-213ENST00000568158 EARS2Q5JPH6 523 aaKnown RBP14.8□□□□□ -0.04
CNOT1-213ENST00000568158 UTP14CQ5TAP6 766 aaKnown RBP14.8□□□□□ -0.04
CNOT1-213ENST00000568158 KRT40Q6A162 431 aa14.8□□□□□ -0.04
CNOT1-213ENST00000568158 NIPA1Q7RTP0 329 aa14.8□□□□□ -0.04
CNOT1-213ENST00000568158 GIMAP8Q8ND71 665 aaPredicted RBP14.8□□□□□ -0.04
CNOT1-213ENST00000568158 IL27Q8NEV9 243 aa14.8□□□□□ -0.04
CNOT1-213ENST00000568158 C16orf70Q9BSU1 422 aa14.8□□□□□ -0.04
CNOT1-213ENST00000568158 TRPV6Q9H1D0 765 aa14.8□□□□□ -0.04
CNOT1-213ENST00000568158 PDLIM7Q9NR12 457 aa14.8□□□□□ -0.04
CNOT1-213ENST00000568158 TMEM39AQ9NV64 488 aa14.8□□□□□ -0.04
CNOT1-213ENST00000568158 FAM205CA6NFA0 338 aa14.79□□□□□ -0.04
CNOT1-213ENST00000568158 BTBD18B2RXH4 712 aa14.79□□□□□ -0.04
CNOT1-213ENST00000568158 CD4P01730 458 aa14.79□□□□□ -0.04
CNOT1-213ENST00000568158 CLTBP09497 229 aa14.79□□□□□ -0.04
CNOT1-213ENST00000568158 HOXD8P13378 290 aaPredicted RBP14.79□□□□□ -0.04
CNOT1-213ENST00000568158 KCNA4P22459 653 aa14.79□□□□□ -0.04
CNOT1-213ENST00000568158 ITGB8P26012 769 aa14.79□□□□□ -0.04
CNOT1-213ENST00000568158 MCM2P49736 904 aa14.79□□□□□ -0.04
CNOT1-213ENST00000568158 ITGB3BPQ13352 177 aaPredicted RBP14.79□□□□□ -0.04
CNOT1-213ENST00000568158 NONOQ15233 471 aaKnown RBP eCLIP14.79□□□□□ -0.04
CNOT1-213ENST00000568158 PRR16Q569H4 304 aa14.79□□□□□ -0.04
CNOT1-213ENST00000568158 FAM47CQ5HY64 1035 aa14.79□□□□□ -0.04
CNOT1-213ENST00000568158 KRT25Q7Z3Z0 450 aa14.79□□□□□ -0.04
CNOT1-213ENST00000568158 FAM126BQ8IXS8 530 aa14.79□□□□□ -0.04
CNOT1-213ENST00000568158 SEPT1Q8WYJ6 367 aa14.79□□□□□ -0.04
CNOT1-213ENST00000568158 SCN10AQ9Y5Y9 1956 aa14.78□□□□□ -0.04
CNOT1-213ENST00000568158 CCDC194A0A1B0GVG4 234 aa14.78□□□□□ -0.04
CNOT1-213ENST00000568158 DDX39AO00148 427 aaKnown RBP14.78□□□□□ -0.04
CNOT1-213ENST00000568158 HAS3O00219 553 aa14.78□□□□□ -0.04
CNOT1-213ENST00000568158 TLR3O15455 904 aaKnown RBP14.78□□□□□ -0.04
CNOT1-213ENST00000568158 DHX15O43143 795 aaKnown RBP14.78□□□□□ -0.04
CNOT1-213ENST00000568158 B4GALT4O60513 344 aa14.78□□□□□ -0.04
CNOT1-213ENST00000568158 TDP2O95551 362 aa14.78□□□□□ -0.04
CNOT1-213ENST00000568158 MMP1P03956 469 aa14.78□□□□□ -0.04
CNOT1-213ENST00000568158 LGALS2P05162 132 aa14.78□□□□□ -0.04
CNOT1-213ENST00000568158 KRT2P35908 639 aa14.78□□□□□ -0.04
CNOT1-213ENST00000568158 HMGN5P82970 282 aaKnown RBP14.78□□□□□ -0.04
CNOT1-213ENST00000568158 MDM2Q00987 491 aaPredicted RBP14.78□□□□□ -0.04
CNOT1-213ENST00000568158 TRIM29Q14134 588 aa14.78□□□□□ -0.04
CNOT1-213ENST00000568158 MFSD10Q14728 455 aa14.78□□□□□ -0.04
CNOT1-213ENST00000568158 PIK3AP1Q6ZUJ8 805 aa14.78□□□□□ -0.04
CNOT1-213ENST00000568158 FAM184AQ8NB25 1140 aa14.78□□□□□ -0.04
CNOT1-213ENST00000568158 C8orf76Q96K31 380 aa14.78□□□□□ -0.04
CNOT1-213ENST00000568158 ZNF577Q9BSK1 485 aa14.78□□□□□ -0.04
CNOT1-213ENST00000568158 TRMT13Q9NUP7 481 aaKnown RBP14.78□□□□□ -0.04
CNOT1-213ENST00000568158 HDAC6Q9UBN7 1215 aa14.78□□□□□ -0.04
CNOT1-213ENST00000568158 SLC9A2Q9UBY0 812 aa14.78□□□□□ -0.04
CNOT1-213ENST00000568158 PRKAG2Q9UGJ0 569 aa14.78□□□□□ -0.04
CNOT1-213ENST00000568158 NFASCO94856 1347 aa14.77□□□□□ -0.04
CNOT1-213ENST00000568158 MROH7Q68CQ1 1323 aa14.77□□□□□ -0.04
CNOT1-213ENST00000568158 H3BRB1 525 aa14.77□□□□□ -0.05
CNOT1-213ENST00000568158 HAX1O00165 279 aa14.77□□□□□ -0.05
CNOT1-213ENST00000568158 KIAA0355O15063 1070 aa14.77□□□□□ -0.05
CNOT1-213ENST00000568158 MSH4O15457 936 aa14.77□□□□□ -0.05
CNOT1-213ENST00000568158 F2P00734 622 aa14.77□□□□□ -0.05
CNOT1-213ENST00000568158 TCF7P36402 384 aaPredicted RBP14.77□□□□□ -0.05
CNOT1-213ENST00000568158 MAGEA10P43363 369 aaPredicted RBP14.77□□□□□ -0.05
CNOT1-213ENST00000568158 KIAA0753Q2KHM9 967 aa14.77□□□□□ -0.05
CNOT1-213ENST00000568158 NFRKBQ6P4R8 1299 aa14.77□□□□□ -0.05
CNOT1-213ENST00000568158 DIS3L2Q8IYB7 885 aaKnown RBP14.77□□□□□ -0.05
CNOT1-213ENST00000568158 BADQ92934 168 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms