RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 EDIL3O43854 480 aa16.4■□□□□ 0.22
COMMD4-221ENST00000567935 ICAM1P05362 532 aa16.4■□□□□ 0.22
COMMD4-221ENST00000567935 TECP42680 631 aa16.4■□□□□ 0.22
COMMD4-221ENST00000567935 TXKP42681 527 aa16.4■□□□□ 0.22
COMMD4-221ENST00000567935 AFMP43652 599 aa16.4■□□□□ 0.22
COMMD4-221ENST00000567935 GHRHRQ02643 423 aa16.4■□□□□ 0.22
COMMD4-221ENST00000567935 KCNB1Q14721 858 aa16.4■□□□□ 0.22
COMMD4-221ENST00000567935 ZYXQ15942 572 aaKnown RBP16.4■□□□□ 0.22
COMMD4-221ENST00000567935 KRT79Q5XKE5 535 aa16.4■□□□□ 0.22
COMMD4-221ENST00000567935 MCF2L2Q86YR7 1114 aa16.4■□□□□ 0.22
COMMD4-221ENST00000567935 ZNF280CQ8ND82 737 aa16.4■□□□□ 0.22
COMMD4-221ENST00000567935 ENOX1Q8TC92 643 aaKnown RBP16.4■□□□□ 0.22
COMMD4-221ENST00000567935 FAM20AQ96MK3 541 aa16.4■□□□□ 0.22
COMMD4-221ENST00000567935 CDX2Q99626 313 aaPredicted RBP16.4■□□□□ 0.22
COMMD4-221ENST00000567935 MAF1Q9H063 256 aa16.4■□□□□ 0.22
COMMD4-221ENST00000567935 KBTBD4Q9NVX7 518 aa16.4■□□□□ 0.22
COMMD4-221ENST00000567935 KDM3AQ9Y4C1 1321 aa16.4■□□□□ 0.22
COMMD4-221ENST00000567935 AP5Z1O43299 807 aa16.39■□□□□ 0.21
COMMD4-221ENST00000567935 INPP5BP32019 993 aa16.39■□□□□ 0.21
COMMD4-221ENST00000567935 PPP1R2P41236 205 aa16.39■□□□□ 0.21
COMMD4-221ENST00000567935 BACE1P56817 501 aa16.39■□□□□ 0.21
COMMD4-221ENST00000567935 MOGSQ13724 837 aa16.39■□□□□ 0.21
COMMD4-221ENST00000567935 NCAPHQ15003 741 aa16.39■□□□□ 0.21
COMMD4-221ENST00000567935 KCTD17Q8N5Z5 321 aa16.39■□□□□ 0.21
COMMD4-221ENST00000567935 PXYLP1Q8TE99 480 aa16.39■□□□□ 0.21
COMMD4-221ENST00000567935 FAM122AQ96E09 287 aa16.39■□□□□ 0.21
COMMD4-221ENST00000567935 CDK5RAP3Q96JB5 506 aa16.39■□□□□ 0.21
COMMD4-221ENST00000567935 TTC12Q9H892 705 aaPredicted RBP16.39■□□□□ 0.21
COMMD4-221ENST00000567935 KCNMB3Q9NPA1 279 aa16.39■□□□□ 0.21
COMMD4-221ENST00000567935 PCDHA12Q9UN75 941 aa16.39■□□□□ 0.21
COMMD4-221ENST00000567935 OPLAHO14841 1288 aa16.38■□□□□ 0.21
COMMD4-221ENST00000567935 CBFA2T2O43439 604 aa16.38■□□□□ 0.21
COMMD4-221ENST00000567935 CYP2C8P10632 490 aa16.38■□□□□ 0.21
COMMD4-221ENST00000567935 PTPRAP18433 802 aa16.38■□□□□ 0.21
COMMD4-221ENST00000567935 SNAP25P60880 206 aa16.38■□□□□ 0.21
COMMD4-221ENST00000567935 NAALADL2Q58DX5 795 aa16.38■□□□□ 0.21
COMMD4-221ENST00000567935 GRAMD1CQ8IYS0 662 aa16.38■□□□□ 0.21
COMMD4-221ENST00000567935 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.38■□□□□ 0.21
COMMD4-221ENST00000567935 NT5C3AQ9H0P0 336 aa16.38■□□□□ 0.21
COMMD4-221ENST00000567935 PPP1R9AQ9ULJ8 1098 aa16.38■□□□□ 0.21
COMMD4-221ENST00000567935 A0A087WWV3 80 aa16.37■□□□□ 0.21
COMMD4-221ENST00000567935 ZBED4O75132 1171 aa16.37■□□□□ 0.21
COMMD4-221ENST00000567935 RPN1P04843 607 aaKnown RBP16.37■□□□□ 0.21
COMMD4-221ENST00000567935 PLCG1P19174 1290 aa16.37■□□□□ 0.21
COMMD4-221ENST00000567935 VCAM1P19320 739 aa16.37■□□□□ 0.21
COMMD4-221ENST00000567935 BMP6P22004 513 aa16.37■□□□□ 0.21
COMMD4-221ENST00000567935 MSNP26038 577 aaKnown RBP16.37■□□□□ 0.21
COMMD4-221ENST00000567935 PPATQ06203 517 aa16.37■□□□□ 0.21
COMMD4-221ENST00000567935 MTMR2Q13614 643 aa16.37■□□□□ 0.21
COMMD4-221ENST00000567935 HYIQ5T013 277 aa16.37■□□□□ 0.21
COMMD4-221ENST00000567935 ZNF697Q5TEC3 545 aa16.37■□□□□ 0.21
COMMD4-221ENST00000567935 ZNF658Q5TYW1 1059 aaPredicted RBP16.37■□□□□ 0.21
COMMD4-221ENST00000567935 CCDC174Q6PII3 467 aa16.37■□□□□ 0.21
COMMD4-221ENST00000567935 ANKLE1Q8NAG6 615 aa16.37■□□□□ 0.21
COMMD4-221ENST00000567935 HAS1Q92839 578 aa16.37■□□□□ 0.21
COMMD4-221ENST00000567935 MMTAG2Q9BU76 263 aaKnown RBP16.37■□□□□ 0.21
COMMD4-221ENST00000567935 SLC38A10Q9HBR0 1119 aa16.37■□□□□ 0.21
COMMD4-221ENST00000567935 EMILIN3Q9NT22 766 aa16.37■□□□□ 0.21
COMMD4-221ENST00000567935 CCPG1Q9ULG6 757 aa16.37■□□□□ 0.21
COMMD4-221ENST00000567935 ZKSCAN5Q9Y2L8 839 aa16.37■□□□□ 0.21
COMMD4-221ENST00000567935 CTDP1Q9Y5B0 961 aaPredicted RBP16.37■□□□□ 0.21
COMMD4-221ENST00000567935 PP2D1A8MPX8 630 aa16.36■□□□□ 0.21
COMMD4-221ENST00000567935 TNFRSF10AO00220 468 aa16.36■□□□□ 0.21
COMMD4-221ENST00000567935 CDC25AP30304 524 aa16.36■□□□□ 0.21
COMMD4-221ENST00000567935 HOXD11P31277 338 aaPredicted RBP16.36■□□□□ 0.21
COMMD4-221ENST00000567935 HSD17B4P51659 736 aa16.36■□□□□ 0.21
COMMD4-221ENST00000567935 OAZ1P54368 228 aa16.36■□□□□ 0.21
COMMD4-221ENST00000567935 SPP2Q13103 211 aa16.36■□□□□ 0.21
COMMD4-221ENST00000567935 IRF5Q13568 498 aa16.36■□□□□ 0.21
COMMD4-221ENST00000567935 HAUS3Q68CZ6 603 aa16.36■□□□□ 0.21
COMMD4-221ENST00000567935 ISM2Q6H9L7 571 aa16.36■□□□□ 0.21
COMMD4-221ENST00000567935 CNNM4Q6P4Q7 775 aa16.36■□□□□ 0.21
COMMD4-221ENST00000567935 ERMNQ8TAM6 284 aa16.36■□□□□ 0.21
COMMD4-221ENST00000567935 SNX29Q8TEQ0 813 aa16.36■□□□□ 0.21
COMMD4-221ENST00000567935 PARK7Q99497 189 aaKnown RBP16.36■□□□□ 0.21
COMMD4-221ENST00000567935 MTRQ99707 1265 aa16.36■□□□□ 0.21
COMMD4-221ENST00000567935 C7orf25Q9BPX7 421 aa16.36■□□□□ 0.21
COMMD4-221ENST00000567935 TANGO6Q9C0B7 1094 aa16.36■□□□□ 0.21
COMMD4-221ENST00000567935 C11orf49Q9H6J7 331 aa16.36■□□□□ 0.21
COMMD4-221ENST00000567935 FBXO28Q9NVF7 368 aa16.36■□□□□ 0.21
COMMD4-221ENST00000567935 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.36■□□□□ 0.21
COMMD4-221ENST00000567935 CDH23Q9H251 3354 aa16.35■□□□□ 0.21
COMMD4-221ENST00000567935 FLOT1O75955 427 aa16.35■□□□□ 0.21
COMMD4-221ENST00000567935 CFBP00751 764 aa16.35■□□□□ 0.21
COMMD4-221ENST00000567935 ZNF76P36508 570 aa16.35■□□□□ 0.21
COMMD4-221ENST00000567935 SETQ01105 290 aaPredicted RBP16.35■□□□□ 0.21
COMMD4-221ENST00000567935 STIM1Q13586 685 aa16.35■□□□□ 0.21
COMMD4-221ENST00000567935 CUL4BQ13620 913 aa16.35■□□□□ 0.21
COMMD4-221ENST00000567935 TMEM119Q4V9L6 283 aa16.35■□□□□ 0.21
COMMD4-221ENST00000567935 SV2BQ7L1I2 683 aa16.35■□□□□ 0.21
COMMD4-221ENST00000567935 CCDC84Q86UT8 332 aaPredicted RBP16.35■□□□□ 0.21
COMMD4-221ENST00000567935 DRC7Q8IY82 874 aa16.35■□□□□ 0.21
COMMD4-221ENST00000567935 ETNPPLQ8TBG4 499 aa16.35■□□□□ 0.21
COMMD4-221ENST00000567935 RPAP3Q9H6T3 665 aaPredicted RBP16.35■□□□□ 0.21
COMMD4-221ENST00000567935 TMOD4Q9NZQ9 345 aa16.35■□□□□ 0.21
COMMD4-221ENST00000567935 KCNH4Q9UQ05 1017 aa16.35■□□□□ 0.21
COMMD4-221ENST00000567935 PHIPQ8WWQ0 1821 aa16.35■□□□□ 0.21
COMMD4-221ENST00000567935 TMEM265A0A087WTH1 108 aa16.34■□□□□ 0.21
COMMD4-221ENST00000567935 RHOBTB3O94955 611 aa16.34■□□□□ 0.21
COMMD4-221ENST00000567935 GRB10Q13322 594 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms