RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 LINC01599Q8WXQ3 324 aa6.57□□□□□ -1.36
CAPN3-217ENST00000567817 KRTAP4-12Q9BQ66 201 aa6.57□□□□□ -1.36
CAPN3-217ENST00000567817 G6PC3Q9BUM1 346 aa6.57□□□□□ -1.36
CAPN3-217ENST00000567817 DSCC1Q9BVC3 393 aa6.57□□□□□ -1.36
CAPN3-217ENST00000567817 CAPN10Q9HC96 672 aa6.57□□□□□ -1.36
CAPN3-217ENST00000567817 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.57□□□□□ -1.36
CAPN3-217ENST00000567817 DDX19BQ9UMR2 479 aa6.57□□□□□ -1.36
CAPN3-217ENST00000567817 MINPP1Q9UNW1 487 aa6.57□□□□□ -1.36
CAPN3-217ENST00000567817 COL3A1P02461 1466 aaPredicted RBP6.57□□□□□ -1.36
CAPN3-217ENST00000567817 LY75O60449 1722 aa6.56□□□□□ -1.36
CAPN3-217ENST00000567817 LTBP3Q9NS15 1303 aa6.56□□□□□ -1.36
CAPN3-217ENST00000567817 A0A1W2PQH9 124 aa6.56□□□□□ -1.36
CAPN3-217ENST00000567817 LRRC10BA6NIK2 292 aa6.56□□□□□ -1.36
CAPN3-217ENST00000567817 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.56□□□□□ -1.36
CAPN3-217ENST00000567817 FYB1O15117 783 aa6.56□□□□□ -1.36
CAPN3-217ENST00000567817 BCAR3O75815 825 aa6.56□□□□□ -1.36
CAPN3-217ENST00000567817 ZNF205O95201 554 aa6.56□□□□□ -1.36
CAPN3-217ENST00000567817 GSNP06396 782 aa6.56□□□□□ -1.36
CAPN3-217ENST00000567817 CTSKP43235 329 aa6.56□□□□□ -1.36
CAPN3-217ENST00000567817 KIR2DL1P43626 348 aaPredicted RBP6.56□□□□□ -1.36
CAPN3-217ENST00000567817 KIR2DL2P43627 348 aaPredicted RBP6.56□□□□□ -1.36
CAPN3-217ENST00000567817 CASP7P55210 303 aa6.56□□□□□ -1.36
CAPN3-217ENST00000567817 GNL2Q13823 731 aaKnown RBP6.56□□□□□ -1.36
CAPN3-217ENST00000567817 BECN1Q14457 450 aa6.56□□□□□ -1.36
CAPN3-217ENST00000567817 ALDH1L2Q3SY69 923 aa6.56□□□□□ -1.36
CAPN3-217ENST00000567817 MPZL3Q6UWV2 235 aa6.56□□□□□ -1.36
CAPN3-217ENST00000567817 NPM2Q86SE8 214 aaKnown RBP6.56□□□□□ -1.36
CAPN3-217ENST00000567817 FTSJ3Q8IY81 847 aaKnown RBP6.56□□□□□ -1.36
CAPN3-217ENST00000567817 LIN37Q96GY3 246 aaPredicted RBP6.56□□□□□ -1.36
CAPN3-217ENST00000567817 MAP6Q96JE9 813 aa6.56□□□□□ -1.36
CAPN3-217ENST00000567817 FCRL2Q96LA5 508 aaPredicted RBP6.56□□□□□ -1.36
CAPN3-217ENST00000567817 PLEKHF1Q96S99 279 aa6.56□□□□□ -1.36
CAPN3-217ENST00000567817 GP6Q9HCN6 339 aa6.56□□□□□ -1.36
CAPN3-217ENST00000567817 TTC21AQ8NDW8 1320 aa6.55□□□□□ -1.36
CAPN3-217ENST00000567817 MEIS1O00470 390 aa6.55□□□□□ -1.36
CAPN3-217ENST00000567817 FARP2O94887 1054 aaPredicted RBP6.55□□□□□ -1.36
CAPN3-217ENST00000567817 CD247P20963 164 aa6.55□□□□□ -1.36
CAPN3-217ENST00000567817 TMPOP42166 694 aaKnown RBP6.55□□□□□ -1.36
CAPN3-217ENST00000567817 TNNT2P45379 298 aaPredicted RBP6.55□□□□□ -1.36
CAPN3-217ENST00000567817 HDAC1Q13547 482 aaPredicted RBP6.55□□□□□ -1.36
CAPN3-217ENST00000567817 MVPQ14764 893 aaKnown RBP6.55□□□□□ -1.36
CAPN3-217ENST00000567817 SNX17Q15036 470 aa6.55□□□□□ -1.36
CAPN3-217ENST00000567817 MLANAQ16655 118 aa6.55□□□□□ -1.36
CAPN3-217ENST00000567817 CRTC3Q6UUV7 619 aa6.55□□□□□ -1.36
CAPN3-217ENST00000567817 VPS37DQ86XT2 251 aa6.55□□□□□ -1.36
CAPN3-217ENST00000567817 COL23A1Q86Y22 540 aaPredicted RBP6.55□□□□□ -1.36
CAPN3-217ENST00000567817 CWC22Q9HCG8 908 aaKnown RBP6.55□□□□□ -1.36
CAPN3-217ENST00000567817 EBF1Q9UH73 591 aa6.55□□□□□ -1.36
CAPN3-217ENST00000567817 ZMYM5Q9UJ78 669 aa6.55□□□□□ -1.36
CAPN3-217ENST00000567817 CCNL1Q9UK58 526 aaPredicted RBP6.55□□□□□ -1.36
CAPN3-217ENST00000567817 FHOD1Q9Y613 1164 aa6.55□□□□□ -1.36
CAPN3-217ENST00000567817 EDC4Q6P2E9 1401 aaKnown RBP6.55□□□□□ -1.36
CAPN3-217ENST00000567817 TNRC6CQ9HCJ0 1690 aaKnown RBP6.55□□□□□ -1.36
CAPN3-217ENST00000567817 CD163L1Q9NR16 1453 aa6.54□□□□□ -1.36
CAPN3-217ENST00000567817 ANKRD26Q9UPS8 1709 aa6.54□□□□□ -1.36
CAPN3-217ENST00000567817 KRTAP9-6A0A140TA67 174 aa6.54□□□□□ -1.36
CAPN3-217ENST00000567817 CBFA2T2O43439 604 aa6.54□□□□□ -1.36
CAPN3-217ENST00000567817 FKTNO75072 461 aa6.54□□□□□ -1.36
CAPN3-217ENST00000567817 TP53P04637 393 aaPredicted RBP6.54□□□□□ -1.36
CAPN3-217ENST00000567817 ITGA4P13612 1032 aa6.54□□□□□ -1.36
CAPN3-217ENST00000567817 TRHRP34981 398 aaPredicted RBP6.54□□□□□ -1.36
CAPN3-217ENST00000567817 ZNF445P59923 1031 aa6.54□□□□□ -1.36
CAPN3-217ENST00000567817 TGFB2P61812 414 aa6.54□□□□□ -1.36
CAPN3-217ENST00000567817 TCEAL1Q15170 157 aa6.54□□□□□ -1.36
CAPN3-217ENST00000567817 GNPTABQ3T906 1256 aa6.54□□□□□ -1.36
CAPN3-217ENST00000567817 NOL9Q5SY16 702 aaKnown RBP6.54□□□□□ -1.36
CAPN3-217ENST00000567817 CWF19L1Q69YN2 538 aaKnown RBP6.54□□□□□ -1.36
CAPN3-217ENST00000567817 ARHGAP45Q92619 1136 aa6.54□□□□□ -1.36
CAPN3-217ENST00000567817 HAUS7Q99871 368 aa6.54□□□□□ -1.36
CAPN3-217ENST00000567817 RNF32Q9H0A6 362 aa6.54□□□□□ -1.36
CAPN3-217ENST00000567817 NMRK2Q9NPI5 230 aa6.54□□□□□ -1.36
CAPN3-217ENST00000567817 PCNTO95613 3336 aa6.54□□□□□ -1.36
CAPN3-217ENST00000567817 KAT6BQ8WYB5 2073 aa6.54□□□□□ -1.36
CAPN3-217ENST00000567817 A0A087WZG4 1122 aa6.53□□□□□ -1.36
CAPN3-217ENST00000567817 U2SURPO15042 1029 aaKnown RBP6.53□□□□□ -1.36
CAPN3-217ENST00000567817 USP2O75604 605 aaPredicted RBP6.53□□□□□ -1.36
CAPN3-217ENST00000567817 VAV1P15498 845 aa6.53□□□□□ -1.36
CAPN3-217ENST00000567817 DEKP35659 375 aaKnown RBP6.53□□□□□ -1.36
CAPN3-217ENST00000567817 SLC7A5Q01650 507 aa6.53□□□□□ -1.36
CAPN3-217ENST00000567817 PPP2R5EQ16537 467 aa6.53□□□□□ -1.36
CAPN3-217ENST00000567817 TIGD5Q53EQ6 642 aa6.53□□□□□ -1.36
CAPN3-217ENST00000567817 ATF7IPQ6VMQ6 1270 aa6.53□□□□□ -1.36
CAPN3-217ENST00000567817 FAM169BQ8N8A8 192 aa6.53□□□□□ -1.36
CAPN3-217ENST00000567817 FRAT1Q92837 279 aaPredicted RBP6.53□□□□□ -1.36
CAPN3-217ENST00000567817 FAM84AQ96KN4 292 aa6.53□□□□□ -1.36
CAPN3-217ENST00000567817 TINF2Q9BSI4 451 aa6.53□□□□□ -1.36
CAPN3-217ENST00000567817 SLC6A17Q9H1V8 727 aa6.53□□□□□ -1.36
CAPN3-217ENST00000567817 SMC4Q9NTJ3 1288 aa6.53□□□□□ -1.36
CAPN3-217ENST00000567817 FAM86C1Q9NVL1 165 aa6.53□□□□□ -1.36
CAPN3-217ENST00000567817 TNFRSF10DQ9UBN6 386 aa6.53□□□□□ -1.36
CAPN3-217ENST00000567817 GPR160Q9UJ42 338 aa6.53□□□□□ -1.36
CAPN3-217ENST00000567817 ZNF451Q9Y4E5 1061 aa6.53□□□□□ -1.36
CAPN3-217ENST00000567817 NFAT5O94916 1531 aa6.53□□□□□ -1.36
CAPN3-217ENST00000567817 FAM208AQ9UK61 1670 aaKnown RBP6.52□□□□□ -1.37
CAPN3-217ENST00000567817 H0Y8X5 98 aa6.52□□□□□ -1.37
CAPN3-217ENST00000567817 NRDCO43847 1150 aa6.52□□□□□ -1.37
CAPN3-217ENST00000567817 RGS3P49796 1198 aa6.52□□□□□ -1.37
CAPN3-217ENST00000567817 RIPK4P57078 832 aa6.52□□□□□ -1.37
CAPN3-217ENST00000567817 MESP2Q0VG99 397 aa6.52□□□□□ -1.37
CAPN3-217ENST00000567817 ZPBP2Q6X784 338 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms