RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 XRRA1Q6P2D8 792 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 APOA5Q6Q788 366 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 ZNF365Q70YC5 407 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 C16orf59Q7L2K0 433 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 TEX2Q8IWB9 1127 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 CMTR1Q8N1G2 835 aaKnown RBP5.51□□□□□ -1.53
CLK3-219ENST00000567805 ZNF710Q8N1W2 664 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 CCDC155Q8N6L0 562 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 SMARCC2Q8TAQ2 1214 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 CAGE1Q8TC20 777 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 HERVK_113Q902F9 699 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 KAT2BQ92831 832 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 KCNB2Q92953 911 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 GUCD1Q96NT3 240 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 INPP4AQ96PE3 977 aaPredicted RBP5.51□□□□□ -1.53
CLK3-219ENST00000567805 WNT8AQ9H1J5 351 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 SEMA6BQ9H3T3 888 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 PSTPIP2Q9H939 334 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 NOD1Q9Y239 953 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 STK24Q9Y6E0 443 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 CNTNAP5Q8WYK1 1306 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 TET1Q8NFU7 2136 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.5□□□□□ -1.53
CLK3-219ENST00000567805 KLF18A0A0U1RQI7 1052 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 GOLGA8AA7E2F4 631 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 GOLGA8BA8MQT2 603 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 SPATA31C2B4DYI2 1134 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 hCG_1984214I3L0E3 225 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 HAS3O00219 553 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 FIBPO43427 364 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 EPB41L2O43491 1005 aaKnown RBP5.5□□□□□ -1.53
CLK3-219ENST00000567805 PARNO95453 639 aaKnown RBP5.5□□□□□ -1.53
CLK3-219ENST00000567805 IQCF3P0C7M6 154 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 ZNF286BP0CG31 522 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 ACTN1P12814 892 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 DNAJB2P25686 324 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 HSPA4P34932 840 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 PSEN1P49768 467 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 PSEN2P49810 448 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 CHMP4BP1P59074 171 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 FGD1P98174 961 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 SP2Q02086 613 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 NEDD9Q14511 834 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 MFSD10Q14728 455 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 PTGISQ16647 500 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 KIAA0753Q2KHM9 967 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 HSDL1Q3SXM5 330 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 GDF6Q6KF10 455 aaPredicted RBP5.5□□□□□ -1.53
CLK3-219ENST00000567805 PPP1R18Q6NYC8 613 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 USP17L6PQ6QN14 398 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 METTL7BQ6UX53 244 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 OTOP2Q7RTS6 562 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 HEATR3Q7Z4Q2 680 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 RAB11FIP4Q86YS3 637 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 FBXL16Q8N461 479 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 CCDC82Q8N4S0 544 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 ZNF713Q8N859 430 aaPredicted RBP5.5□□□□□ -1.53
CLK3-219ENST00000567805 C7orf31Q8N865 590 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 RETREG2Q8NC44 543 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 GIMAP8Q8ND71 665 aaPredicted RBP5.5□□□□□ -1.53
CLK3-219ENST00000567805 AFAP1L1Q8TED9 768 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 GPKOWQ92917 476 aaPredicted RBP eCLIP5.5□□□□□ -1.53
CLK3-219ENST00000567805 TIFAQ96CG3 184 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 SCLYQ96I15 445 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 ZFP91Q96JP5 570 aaPredicted RBP5.5□□□□□ -1.53
CLK3-219ENST00000567805 CDHR1Q96JP9 859 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 TCEANC2Q96MN5 208 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 FAM161BQ96MY7 647 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 SPATA33Q96N06 139 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 SENP7Q9BQF6 1050 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 TTYH1Q9H313 450 aaPredicted RBP5.5□□□□□ -1.53
CLK3-219ENST00000567805 EHMT1Q9H9B1 1298 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 MLXIPQ9HAP2 919 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 GTF2IRD1Q9UHL9 959 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 BRPF3Q9ULD4 1205 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 NID2Q14112 1375 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 WDR81Q562E7 1941 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 MICAL3Q7RTP6 2002 aa5.5□□□□□ -1.53
CLK3-219ENST00000567805 SIP14410 1827 aa5.49□□□□□ -1.53
CLK3-219ENST00000567805 CCDC196A0A1B0GTZ2 297 aa5.49□□□□□ -1.53
CLK3-219ENST00000567805 hCG_1642624A0A1W2PR95 340 aa5.49□□□□□ -1.53
CLK3-219ENST00000567805 SPDYE3A6NKU9 549 aa5.49□□□□□ -1.53
CLK3-219ENST00000567805 H3BRB1 525 aa5.49□□□□□ -1.53
CLK3-219ENST00000567805 STXBP3O00186 592 aa5.49□□□□□ -1.53
CLK3-219ENST00000567805 NOP56O00567 594 aaKnown RBP5.49□□□□□ -1.53
CLK3-219ENST00000567805 SORBS3O60504 671 aa5.49□□□□□ -1.53
CLK3-219ENST00000567805 PSMA5P28066 241 aa5.49□□□□□ -1.53
CLK3-219ENST00000567805 METAP2P50579 478 aaKnown RBP eCLIP5.49□□□□□ -1.53
CLK3-219ENST00000567805 NAPAP54920 295 aa5.49□□□□□ -1.53
CLK3-219ENST00000567805 RBL2Q08999 1139 aa5.49□□□□□ -1.53
CLK3-219ENST00000567805 FUT2Q10981 343 aa5.49□□□□□ -1.53
CLK3-219ENST00000567805 SEMA3FQ13275 785 aa5.49□□□□□ -1.53
CLK3-219ENST00000567805 PTK7Q13308 1070 aa5.49□□□□□ -1.53
CLK3-219ENST00000567805 RAB30Q15771 203 aa5.49□□□□□ -1.53
CLK3-219ENST00000567805 UBE2SQ16763 222 aa5.49□□□□□ -1.53
CLK3-219ENST00000567805 WWC2Q6AWC2 1192 aa5.49□□□□□ -1.53
CLK3-219ENST00000567805 BLOC1S2Q6QNY1 142 aa5.49□□□□□ -1.53
CLK3-219ENST00000567805 CYFIP1Q7L576 1253 aa5.49□□□□□ -1.53
CLK3-219ENST00000567805 DEFB128Q7Z7B8 93 aa5.49□□□□□ -1.53
CLK3-219ENST00000567805 NLRX1Q86UT6 975 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms