RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 SORBS3O60504 671 aa17.28■□□□□ 0.36
RNF40-209ENST00000566703 ARHGEF15O94989 841 aa17.28■□□□□ 0.36
RNF40-209ENST00000566703 DEFB103AP81534 67 aa17.28■□□□□ 0.36
RNF40-209ENST00000566703 SEMA3FQ13275 785 aa17.28■□□□□ 0.36
RNF40-209ENST00000566703 MBTPS1Q14703 1052 aa17.28■□□□□ 0.36
RNF40-209ENST00000566703 CYFIP1Q7L576 1253 aa17.28■□□□□ 0.36
RNF40-209ENST00000566703 NLRX1Q86UT6 975 aa17.28■□□□□ 0.36
RNF40-209ENST00000566703 MICALL1Q8N3F8 863 aa17.28■□□□□ 0.36
RNF40-209ENST00000566703 GIMAP8Q8ND71 665 aaPredicted RBP17.28■□□□□ 0.36
RNF40-209ENST00000566703 ADAMTS19Q8TE59 1207 aa17.28■□□□□ 0.36
RNF40-209ENST00000566703 GPR20Q99678 358 aa17.28■□□□□ 0.36
RNF40-209ENST00000566703 RNPEPQ9H4A4 650 aa17.28■□□□□ 0.36
RNF40-209ENST00000566703 RTEL1Q9NZ71 1219 aa17.28■□□□□ 0.36
RNF40-209ENST00000566703 UNC80Q8N2C7 3258 aa17.28■□□□□ 0.36
RNF40-209ENST00000566703 CCDC69A6NI79 296 aa17.27■□□□□ 0.36
RNF40-209ENST00000566703 SMIM10L2AP0DMW4 78 aa17.27■□□□□ 0.36
RNF40-209ENST00000566703 SMIM10L2BP0DMW5 78 aa17.27■□□□□ 0.36
RNF40-209ENST00000566703 BMP1P13497 986 aa17.27■□□□□ 0.36
RNF40-209ENST00000566703 THPOP40225 353 aa17.27■□□□□ 0.36
RNF40-209ENST00000566703 ERVK-21P61565 698 aa17.27■□□□□ 0.36
RNF40-209ENST00000566703 GRB10Q13322 594 aa17.27■□□□□ 0.36
RNF40-209ENST00000566703 NECTIN1Q15223 517 aa17.27■□□□□ 0.36
RNF40-209ENST00000566703 SKIV2LQ15477 1246 aaKnown RBP17.27■□□□□ 0.36
RNF40-209ENST00000566703 TCTN1Q2MV58 587 aa17.27■□□□□ 0.36
RNF40-209ENST00000566703 PLEKHG4Q58EX7 1191 aa17.27■□□□□ 0.36
RNF40-209ENST00000566703 USP17L6PQ6QN14 398 aa17.27■□□□□ 0.36
RNF40-209ENST00000566703 NFXL1Q6ZNB6 911 aa17.27■□□□□ 0.36
RNF40-209ENST00000566703 SRBD1Q8N5C6 995 aaKnown RBP17.27■□□□□ 0.36
RNF40-209ENST00000566703 DBF4BQ8NFT6 615 aa17.27■□□□□ 0.36
RNF40-209ENST00000566703 PIBF1Q8WXW3 757 aa17.27■□□□□ 0.36
RNF40-209ENST00000566703 LSG1Q9H089 658 aaKnown RBP17.27■□□□□ 0.36
RNF40-209ENST00000566703 BCAS3Q9H6U6 928 aa17.27■□□□□ 0.36
RNF40-209ENST00000566703 ZNF215Q9UL58 517 aaPredicted RBP17.27■□□□□ 0.36
RNF40-209ENST00000566703 INSL6Q9Y581 213 aa17.27■□□□□ 0.36
RNF40-209ENST00000566703 MYH7BA7E2Y1 1941 aa17.26■□□□□ 0.35
RNF40-209ENST00000566703 SH2B2O14492 632 aaPredicted RBP17.26■□□□□ 0.35
RNF40-209ENST00000566703 TREHO43280 583 aa17.26■□□□□ 0.35
RNF40-209ENST00000566703 MKRN4PQ13434 485 aaPredicted RBP17.26■□□□□ 0.35
RNF40-209ENST00000566703 CDHR1Q96JP9 859 aa17.26■□□□□ 0.35
RNF40-209ENST00000566703 TGS1Q96RS0 853 aaKnown RBP17.26■□□□□ 0.35
RNF40-209ENST00000566703 UHRF1Q96T88 793 aaPredicted RBP17.26■□□□□ 0.35
RNF40-209ENST00000566703 ESYT1Q9BSJ8 1104 aa17.26■□□□□ 0.35
RNF40-209ENST00000566703 MYL10Q9BUA6 226 aa17.26■□□□□ 0.35
RNF40-209ENST00000566703 PSTPIP2Q9H939 334 aa17.26■□□□□ 0.35
RNF40-209ENST00000566703 LCHNA4D1U4 455 aa17.25■□□□□ 0.35
RNF40-209ENST00000566703 SLC27A2O14975 620 aa17.25■□□□□ 0.35
RNF40-209ENST00000566703 MAFGO15525 162 aa17.25■□□□□ 0.35
RNF40-209ENST00000566703 LPXNO60711 386 aa17.25■□□□□ 0.35
RNF40-209ENST00000566703 AMHP03971 560 aa17.25■□□□□ 0.35
RNF40-209ENST00000566703 ADAM17P78536 824 aa17.25■□□□□ 0.35
RNF40-209ENST00000566703 TEX2Q8IWB9 1127 aa17.25■□□□□ 0.35
RNF40-209ENST00000566703 SEPT8Q92599 483 aa17.25■□□□□ 0.35
RNF40-209ENST00000566703 GPRASP2Q96D09 838 aa17.25■□□□□ 0.35
RNF40-209ENST00000566703 CDH23Q9H251 3354 aa17.25■□□□□ 0.35
RNF40-209ENST00000566703 BAZ2BQ9UIF8 2168 aaKnown RBP17.25■□□□□ 0.35
RNF40-209ENST00000566703 NRCAMQ92823 1304 aa17.24■□□□□ 0.35
RNF40-209ENST00000566703 LINC01553A4QN01 128 aa17.24■□□□□ 0.35
RNF40-209ENST00000566703 PLEKHA8P1O95397 391 aa17.24■□□□□ 0.35
RNF40-209ENST00000566703 IRX6P78412 446 aaPredicted RBP17.24■□□□□ 0.35
RNF40-209ENST00000566703 FAM26DQ5JW98 314 aa17.24■□□□□ 0.35
RNF40-209ENST00000566703 CREB3L3Q68CJ9 461 aa17.24■□□□□ 0.35
RNF40-209ENST00000566703 TMCO2Q7Z6W1 182 aaPredicted RBP17.24■□□□□ 0.35
RNF40-209ENST00000566703 RPAINQ86UA6 219 aa17.24■□□□□ 0.35
RNF40-209ENST00000566703 SGMS1Q86VZ5 419 aa17.24■□□□□ 0.35
RNF40-209ENST00000566703 FANCBQ8NB91 859 aa17.24■□□□□ 0.35
RNF40-209ENST00000566703 SUGCTQ9HAC7 445 aa17.24■□□□□ 0.35
RNF40-209ENST00000566703 SETD4Q9NVD3 440 aa17.24■□□□□ 0.35
RNF40-209ENST00000566703 SLC12A7Q9Y666 1083 aa17.24■□□□□ 0.35
RNF40-209ENST00000566703 HTRA4P83105 476 aaPredicted RBP17.23■□□□□ 0.35
RNF40-209ENST00000566703 KRT40Q6A162 431 aa17.23■□□□□ 0.35
RNF40-209ENST00000566703 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.23■□□□□ 0.357e-7■■■■□ 22.4
RNF40-209ENST00000566703 SEPT1Q8WYJ6 367 aa17.23■□□□□ 0.35
RNF40-209ENST00000566703 HLA-CQ95604 372 aa17.23■□□□□ 0.35
RNF40-209ENST00000566703 UBIAD1Q9Y5Z9 338 aa17.23■□□□□ 0.35
RNF40-209ENST00000566703 TFF2Q03403 129 aa17.22■□□□□ 0.35
RNF40-209ENST00000566703 UTP14CQ5TAP6 766 aaKnown RBP17.22■□□□□ 0.35
RNF40-209ENST00000566703 RNF20Q5VTR2 975 aa17.22■□□□□ 0.35
RNF40-209ENST00000566703 SYNE3Q6ZMZ3 975 aa17.22■□□□□ 0.35
RNF40-209ENST00000566703 SPRED2Q7Z698 418 aa17.22■□□□□ 0.35
RNF40-209ENST00000566703 SP7Q8TDD2 431 aaPredicted RBP17.22■□□□□ 0.35
RNF40-209ENST00000566703 APBB2Q92870 758 aa17.22■□□□□ 0.35
RNF40-209ENST00000566703 TOP1MTQ969P6 601 aa17.22■□□□□ 0.35
RNF40-209ENST00000566703 SAMD11Q96NU1 681 aa17.22■□□□□ 0.35
RNF40-209ENST00000566703 EYSQ5T1H1 3165 aa17.21■□□□□ 0.35
RNF40-209ENST00000566703 SPDYE3A6NKU9 549 aa17.21■□□□□ 0.35
RNF40-209ENST00000566703 ATP9AO75110 1047 aa17.21■□□□□ 0.35
RNF40-209ENST00000566703 KCNA2P16389 499 aa17.21■□□□□ 0.35
RNF40-209ENST00000566703 ITGB5P18084 799 aa17.21■□□□□ 0.35
RNF40-209ENST00000566703 FAM117BQ6P1L5 589 aa17.21■□□□□ 0.35
RNF40-209ENST00000566703 TAF2Q6P1X5 1199 aa17.21■□□□□ 0.35
RNF40-209ENST00000566703 TMTC3Q6ZXV5 915 aa17.21■□□□□ 0.35
RNF40-209ENST00000566703 MYOCDQ8IZQ8 938 aa17.21■□□□□ 0.35
RNF40-209ENST00000566703 EHMT1Q9H9B1 1298 aa17.21■□□□□ 0.35
RNF40-209ENST00000566703 JADE2Q9NQC1 790 aa17.21■□□□□ 0.35
RNF40-209ENST00000566703 PCDHA6Q9UN73 950 aa17.21■□□□□ 0.35
RNF40-209ENST00000566703 PCDHA8Q9Y5H6 950 aa17.21■□□□□ 0.35
RNF40-209ENST00000566703 PRUNE2Q8WUY3 3088 aa17.21■□□□□ 0.35
RNF40-209ENST00000566703 PRRC2BQ5JSZ5 2229 aaKnown RBP17.2■□□□□ 0.34
RNF40-209ENST00000566703 GSTTP1A0A1W2PQM5 241 aa17.2■□□□□ 0.34
RNF40-209ENST00000566703 TCF7P36402 384 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms