RNA–Protein interactions for RNA: ENST00000566557.5

SCAMP2-208, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-208ENST00000566557 FAM86B1E9PN63 330 aa18.57■□□□□ 0.56
SCAMP2-208ENST00000566557 MYL3P08590 195 aa18.57■□□□□ 0.56
SCAMP2-208ENST00000566557 FAM86B2P0C5J1 330 aa18.57■□□□□ 0.56
SCAMP2-208ENST00000566557 CST5P28325 142 aaPredicted RBP18.57■□□□□ 0.56
SCAMP2-208ENST00000566557 SETQ01105 290 aaPredicted RBP18.57■□□□□ 0.56
SCAMP2-208ENST00000566557 SP2Q02086 613 aa18.57■□□□□ 0.56
SCAMP2-208ENST00000566557 NEDD9Q14511 834 aa18.57■□□□□ 0.56
SCAMP2-208ENST00000566557 PRR16Q569H4 304 aa18.57■□□□□ 0.56
SCAMP2-208ENST00000566557 MCTP1Q6DN14 999 aa18.57■□□□□ 0.56
SCAMP2-208ENST00000566557 NEK8Q86SG6 692 aa18.57■□□□□ 0.56
SCAMP2-208ENST00000566557 KLHDC9Q8NEP7 349 aa18.57■□□□□ 0.56
SCAMP2-208ENST00000566557 AFG1LQ8WV93 481 aa18.57■□□□□ 0.56
SCAMP2-208ENST00000566557 CRYGNQ8WXF5 182 aa18.57■□□□□ 0.56
SCAMP2-208ENST00000566557 FAM161BQ96MY7 647 aa18.57■□□□□ 0.56
SCAMP2-208ENST00000566557 SPATA33Q96N06 139 aa18.57■□□□□ 0.56
SCAMP2-208ENST00000566557 UIMC1Q96RL1 719 aa18.57■□□□□ 0.56
SCAMP2-208ENST00000566557 SENP6Q9GZR1 1112 aaPredicted RBP18.57■□□□□ 0.56
SCAMP2-208ENST00000566557 NOP56O00567 594 aaKnown RBP18.56■□□□□ 0.56
SCAMP2-208ENST00000566557 TDP2O95551 362 aa18.56■□□□□ 0.56
SCAMP2-208ENST00000566557 ASGR1P07306 291 aa18.56■□□□□ 0.56
SCAMP2-208ENST00000566557 ARP10275 920 aa18.56■□□□□ 0.56
SCAMP2-208ENST00000566557 ACLYP53396 1101 aa18.56■□□□□ 0.56
SCAMP2-208ENST00000566557 MDM2Q00987 491 aaPredicted RBP18.56■□□□□ 0.56
SCAMP2-208ENST00000566557 LAMC2Q13753 1193 aa18.56■□□□□ 0.56
SCAMP2-208ENST00000566557 EARS2Q5JPH6 523 aaKnown RBP18.56■□□□□ 0.56
SCAMP2-208ENST00000566557 CELF3Q5SZQ8 465 aaKnown RBP18.56■□□□□ 0.56
SCAMP2-208ENST00000566557 LARP1BQ659C4 914 aaKnown RBP18.56■□□□□ 0.56
SCAMP2-208ENST00000566557 CYFIP1Q7L576 1253 aa18.56■□□□□ 0.56
SCAMP2-208ENST00000566557 NIPA1Q7RTP0 329 aa18.56■□□□□ 0.56
SCAMP2-208ENST00000566557 TNFRSF25Q93038 417 aa18.56■□□□□ 0.56
SCAMP2-208ENST00000566557 VTI1AQ96AJ9 217 aa18.56■□□□□ 0.56
SCAMP2-208ENST00000566557 INTS4Q96HW7 963 aaKnown RBP18.56■□□□□ 0.56
SCAMP2-208ENST00000566557 GUCD1Q96NT3 240 aa18.56■□□□□ 0.56
SCAMP2-208ENST00000566557 KCNH7Q9NS40 1196 aa18.56■□□□□ 0.56
SCAMP2-208ENST00000566557 SPTBN5Q9NRC6 3674 aaKnown RBP18.56■□□□□ 0.56
SCAMP2-208ENST00000566557 A0A1W2PQ45 241 aaPredicted RBP18.55■□□□□ 0.56
SCAMP2-208ENST00000566557 A0A1W2PQY0 241 aa18.55■□□□□ 0.56
SCAMP2-208ENST00000566557 VPS37CA5D8V6 355 aaPredicted RBP18.55■□□□□ 0.56
SCAMP2-208ENST00000566557 MOXD2PA6NHM9 499 aa18.55■□□□□ 0.56
SCAMP2-208ENST00000566557 DDX39AO00148 427 aaKnown RBP18.55■□□□□ 0.56
SCAMP2-208ENST00000566557 CTAGE5O15320 804 aa18.55■□□□□ 0.56
SCAMP2-208ENST00000566557 ATP9AO75110 1047 aa18.55■□□□□ 0.56
SCAMP2-208ENST00000566557 MMP3P08254 477 aa18.55■□□□□ 0.56
SCAMP2-208ENST00000566557 KCNA2P16389 499 aa18.55■□□□□ 0.56
SCAMP2-208ENST00000566557 USP11P51784 963 aa18.55■□□□□ 0.56
SCAMP2-208ENST00000566557 ATN1P54259 1190 aaPredicted RBP18.55■□□□□ 0.56
SCAMP2-208ENST00000566557 CHMP4BP1P59074 171 aa18.55■□□□□ 0.56
SCAMP2-208ENST00000566557 FAM109BQ6ICB4 259 aaPredicted RBP18.55■□□□□ 0.56
SCAMP2-208ENST00000566557 CXCL17Q6UXB2 119 aa18.55■□□□□ 0.56
SCAMP2-208ENST00000566557 SPRYD3Q8NCJ5 442 aa18.55■□□□□ 0.56
SCAMP2-208ENST00000566557 GIMAP8Q8ND71 665 aaPredicted RBP18.55■□□□□ 0.56
SCAMP2-208ENST00000566557 SDF4Q9BRK5 362 aa18.55■□□□□ 0.56
SCAMP2-208ENST00000566557 ZNF577Q9BSK1 485 aa18.55■□□□□ 0.56
SCAMP2-208ENST00000566557 TSEN34Q9BSV6 310 aaKnown RBP18.55■□□□□ 0.56
SCAMP2-208ENST00000566557 AGO4Q9HCK5 861 aaKnown RBP18.55■□□□□ 0.56
SCAMP2-208ENST00000566557 POLR3EQ9NVU0 708 aa18.55■□□□□ 0.56
SCAMP2-208ENST00000566557 TCEAL9Q9UHQ7 104 aa18.55■□□□□ 0.56
SCAMP2-208ENST00000566557 PHF24Q9UPV7 400 aa18.55■□□□□ 0.56
SCAMP2-208ENST00000566557 ALPK3Q96L96 1907 aa18.55■□□□□ 0.56
SCAMP2-208ENST00000566557 IGLV3-22A0A075B6J6 115 aa18.54■□□□□ 0.56
SCAMP2-208ENST00000566557 MEIS1O00470 390 aa18.54■□□□□ 0.56
SCAMP2-208ENST00000566557 MAFGO15525 162 aa18.54■□□□□ 0.56
SCAMP2-208ENST00000566557 CCNT1O60563 726 aaKnown RBP18.54■□□□□ 0.56
SCAMP2-208ENST00000566557 ATP2B1P20020 1258 aa18.54■□□□□ 0.56
SCAMP2-208ENST00000566557 CIITAP33076 1130 aa18.54■□□□□ 0.56
SCAMP2-208ENST00000566557 MYSM1Q5VVJ2 828 aa18.54■□□□□ 0.56
SCAMP2-208ENST00000566557 METTL7BQ6UX53 244 aa18.54■□□□□ 0.56
SCAMP2-208ENST00000566557 GLT1D1Q96MS3 346 aa18.54■□□□□ 0.56
SCAMP2-208ENST00000566557 FOXP1Q9H334 677 aaPredicted RBP18.54■□□□□ 0.56
SCAMP2-208ENST00000566557 BCAS3Q9H6U6 928 aa18.54■□□□□ 0.56
SCAMP2-208ENST00000566557 PRDM6Q9NQX0 595 aa18.54■□□□□ 0.56
SCAMP2-208ENST00000566557 STARD7Q9NQZ5 370 aa18.54■□□□□ 0.56
SCAMP2-208ENST00000566557 DDX25Q9UHL0 483 aaKnown RBP18.54■□□□□ 0.56
SCAMP2-208ENST00000566557 KIF28PB7ZC32 967 aa18.53■□□□□ 0.56
SCAMP2-208ENST00000566557 COL6A1P12109 1028 aa18.53■□□□□ 0.56
SCAMP2-208ENST00000566557 PDCP20941 246 aa18.53■□□□□ 0.56
SCAMP2-208ENST00000566557 HSDL1Q3SXM5 330 aa18.53■□□□□ 0.56
SCAMP2-208ENST00000566557 CCSAPQ6IQ19 270 aaPredicted RBP18.53■□□□□ 0.56
SCAMP2-208ENST00000566557 NOSTRINQ8IVI9 506 aa18.53■□□□□ 0.56
SCAMP2-208ENST00000566557 PPTC7Q8NI37 304 aa18.53■□□□□ 0.56
SCAMP2-208ENST00000566557 EMID1Q96A84 441 aaPredicted RBP18.53■□□□□ 0.56
SCAMP2-208ENST00000566557 NAP1L4Q99733 375 aaKnown RBP18.53■□□□□ 0.56
SCAMP2-208ENST00000566557 SENP7Q9BQF6 1050 aa18.53■□□□□ 0.56
SCAMP2-208ENST00000566557 A6NJR5 290 aa18.52■□□□□ 0.56
SCAMP2-208ENST00000566557 IPO5O00410 1097 aaKnown RBP18.52■□□□□ 0.56
SCAMP2-208ENST00000566557 ZNF286BP0CG31 522 aa18.52■□□□□ 0.56
SCAMP2-208ENST00000566557 GCFC2P16383 781 aaKnown RBP18.52■□□□□ 0.56
SCAMP2-208ENST00000566557 NKX3-2P78367 333 aa18.52■□□□□ 0.56
SCAMP2-208ENST00000566557 ITGB3BPQ13352 177 aaPredicted RBP18.52■□□□□ 0.56
SCAMP2-208ENST00000566557 BECN1Q14457 450 aa18.52■□□□□ 0.56
SCAMP2-208ENST00000566557 DGKDQ16760 1214 aa18.52■□□□□ 0.56
SCAMP2-208ENST00000566557 MOXD1Q6UVY6 613 aa18.52■□□□□ 0.56
SCAMP2-208ENST00000566557 JPH1Q9HDC5 661 aaPredicted RBP18.52■□□□□ 0.56
SCAMP2-208ENST00000566557 SLC9A2Q9UBY0 812 aa18.52■□□□□ 0.56
SCAMP2-208ENST00000566557 NOL7Q9UMY1 257 aaKnown RBP18.52■□□□□ 0.56
SCAMP2-208ENST00000566557 SLC37A4O43826 429 aa18.51■□□□□ 0.55
SCAMP2-208ENST00000566557 EDIL3O43854 480 aa18.51■□□□□ 0.55
SCAMP2-208ENST00000566557 MARCH6O60337 910 aa18.51■□□□□ 0.55
SCAMP2-208ENST00000566557 PSMC6P62333 389 aa18.51■□□□□ 0.55
SCAMP2-208ENST00000566557 PURAQ00577 322 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms