RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 NEUROG2Q9H2A3 272 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 ARHGEF10LQ9HCE6 1279 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.17□□□□□ -1.9
CHD9-218ENST00000566029 TAB2Q9NYJ8 693 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 NKX1-2Q9UD57 310 aaPredicted RBP3.17□□□□□ -1.9
CHD9-218ENST00000566029 ZMYM2Q9UBW7 1377 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 SCAMP1O15126 338 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 NOL3O60936 208 aaKnown RBP3.17□□□□□ -1.9
CHD9-218ENST00000566029 GSTA2P09210 222 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 ERMARDQ5T6L9 678 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 SFMBT2Q5VUG0 894 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 CCDC25Q86WR0 208 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 IRF2BP1Q8IU81 584 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 ANKLE1Q8NAG6 615 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 OR2W6PQ8NHA6 318 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 LZICQ8WZA0 190 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 PPP1R14BQ96C90 147 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 RILPQ96NA2 401 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 TMED5Q9Y3A6 229 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 RNF113AO15541 343 aaKnown RBP3.17□□□□□ -1.9
CHD9-218ENST00000566029 ECE2O60344 883 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 PEX11AO75192 247 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 TACC1O75410 805 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 UBOX5O94941 541 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 RPLP1P05386 114 aaKnown RBP3.17□□□□□ -1.9
CHD9-218ENST00000566029 PPP1R2P41236 205 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 MAGEA1P43355 309 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 CCDC15Q0P6D6 951 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 MTHFSDQ2M296 383 aaKnown RBP3.17□□□□□ -1.9
CHD9-218ENST00000566029 TMEM259Q4ZIN3 620 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 CREG2Q8IUH2 290 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 FAM136AQ96C01 138 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 TLR10Q9BXR5 811 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 MMRN2Q9H8L6 949 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 PREBQ9HCU5 417 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 PPANQ9NQ55 473 aaKnown RBP3.17□□□□□ -1.9
CHD9-218ENST00000566029 TSPYL4Q9UJ04 414 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 NOVA2Q9UNW9 492 aaKnown RBP3.17□□□□□ -1.9
CHD9-218ENST00000566029 COMMD3-BMI1R4GMX3 469 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 LINC00854A0A1B0GVQ3 168 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 ZNF263O14978 683 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 GJB6O95452 261 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 CDC25CP30307 473 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 USP46P62068 366 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 HABP4Q5JVS0 413 aaKnown RBP3.17□□□□□ -1.9
CHD9-218ENST00000566029 DHX32Q7L7V1 743 aaKnown RBP3.17□□□□□ -1.9
CHD9-218ENST00000566029 ADSSL1Q8N142 457 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 PDCD7Q8N8D1 485 aaKnown RBP3.17□□□□□ -1.9
CHD9-218ENST00000566029 ASAP3Q8TDY4 903 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 ATXN2LQ8WWM7 1075 aaKnown RBP3.17□□□□□ -1.9
CHD9-218ENST00000566029 PGM2Q96G03 612 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 SYNRGQ9UMZ2 1314 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 MST1RQ04912 1400 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 AFF2P51816 1311 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 ZNF185O15231 689 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 SNX16P57768 344 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 PPP1R2P3Q6NXS1 205 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 EXOC8Q8IYI6 725 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 STKLD1Q8NE28 680 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 UCMAQ8WVF2 138 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 TSPYL2Q9H2G4 693 aaPredicted RBP3.17□□□□□ -1.9
CHD9-218ENST00000566029 ECT2Q9H8V3 914 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 CABP1Q9NZU7 370 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 PTPRMP28827 1452 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 NBNO60934 754 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 KRT9P35527 623 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 BIRC3Q13489 604 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 WASHC2DQ5SRD0 308 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 TRIM68Q6AZZ1 485 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 OLFML1Q6UWY5 402 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 ZNF365Q70YC5 407 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 LRMDAQ9H2I8 198 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 RWDD2AQ9UIY3 292 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 N6AMT1Q9Y5N5 214 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 EIF4E1BA6NMX2 242 aaKnown RBP3.17□□□□□ -1.9
CHD9-218ENST00000566029 FOXO3O43524 673 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 HOXB7P09629 217 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 KRT83P78385 493 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 ZYG11AQ6WRX3 759 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 AACSQ86V21 672 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 AGGF1Q8N302 714 aaeCLIP3.17□□□□□ -1.95e-8■■■■□ 20.3
CHD9-218ENST00000566029 SLC35B4Q969S0 331 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 LRRC2Q9BYS8 371 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 CNOT10Q9H9A5 744 aaKnown RBP3.17□□□□□ -1.9
CHD9-218ENST00000566029 STK39Q9UEW8 545 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 GM2AP17900 193 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 STX17P56962 302 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 CBX3Q13185 183 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 TTF1Q15361 905 aaPredicted RBP3.17□□□□□ -1.9
CHD9-218ENST00000566029 SULT6B1Q6IMI4 303 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 KIAA0825Q8IV33 1275 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 SIX5Q8N196 739 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 TBC1D16Q8TBP0 767 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 KIFAP3Q92845 792 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 CHP1Q99653 195 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 CEP126Q9P2H0 1117 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 NFU1Q9UMS0 254 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 PLAAQ9Y263 795 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 POLR3DP05423 398 aaPredicted RBP3.17□□□□□ -1.9
CHD9-218ENST00000566029 PARP1P09874 1014 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms