RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 PIK3AP1Q6ZUJ8 805 aa29.48■■■□□ 2.31
NME3-208ENST00000565379 NLRX1Q86UT6 975 aa29.48■■■□□ 2.31
NME3-208ENST00000565379 NOSTRINQ8IVI9 506 aa29.48■■■□□ 2.31
NME3-208ENST00000565379 TMEM39AQ9NV64 488 aa29.48■■■□□ 2.31
NME3-208ENST00000565379 ELP1O95163 1332 aa29.47■■■□□ 2.31
NME3-208ENST00000565379 MAFGO15525 162 aa29.47■■■□□ 2.31
NME3-208ENST00000565379 CIITAP33076 1130 aa29.47■■■□□ 2.31
NME3-208ENST00000565379 MCTP1Q6DN14 999 aa29.47■■■□□ 2.31
NME3-208ENST00000565379 MOXD1Q6UVY6 613 aa29.47■■■□□ 2.31
NME3-208ENST00000565379 IL31RAQ8NI17 732 aa29.47■■■□□ 2.31
NME3-208ENST00000565379 CDHR1Q96JP9 859 aa29.47■■■□□ 2.31
NME3-208ENST00000565379 AP5M1Q9H0R1 490 aa29.47■■■□□ 2.31
NME3-208ENST00000565379 GRIN2DO15399 1336 aa29.46■■■□□ 2.31
NME3-208ENST00000565379 A0A0U1RQG5 324 aaPredicted RBP29.46■■■□□ 2.31
NME3-208ENST00000565379 VPS37CA5D8V6 355 aaPredicted RBP29.46■■■□□ 2.31
NME3-208ENST00000565379 ZNF76P36508 570 aa29.46■■■□□ 2.31
NME3-208ENST00000565379 MRPS9P82933 396 aaKnown RBP29.46■■■□□ 2.31
NME3-208ENST00000565379 NIPA1Q7RTP0 329 aa29.46■■■□□ 2.31
NME3-208ENST00000565379 NEK8Q86SG6 692 aa29.46■■■□□ 2.31
NME3-208ENST00000565379 COPS5Q92905 334 aa29.46■■■□□ 2.31
NME3-208ENST00000565379 INPP4AQ96PE3 977 aaPredicted RBP29.46■■■□□ 2.31
NME3-208ENST00000565379 WDR11Q9BZH6 1224 aa29.46■■■□□ 2.31
NME3-208ENST00000565379 TBX21Q9UL17 535 aa29.46■■■□□ 2.31
NME3-208ENST00000565379 RBM47A0AV96 593 aaKnown RBP29.45■■■□□ 2.31
NME3-208ENST00000565379 ARVCFO00192 962 aa29.45■■■□□ 2.31
NME3-208ENST00000565379 PSMC6P62333 389 aa29.45■■■□□ 2.31
NME3-208ENST00000565379 DUSP28Q4G0W2 176 aa29.45■■■□□ 2.31
NME3-208ENST00000565379 CEP55Q53EZ4 464 aa29.45■■■□□ 2.31
NME3-208ENST00000565379 SCFD2Q8WU76 684 aa29.45■■■□□ 2.31
NME3-208ENST00000565379 GPRASP2Q96D09 838 aa29.45■■■□□ 2.31
NME3-208ENST00000565379 TOX2Q96NM4 488 aa29.45■■■□□ 2.31
NME3-208ENST00000565379 UBIAD1Q9Y5Z9 338 aa29.45■■■□□ 2.31
NME3-208ENST00000565379 DCDC2CA8MYV0 355 aa29.44■■■□□ 2.3
NME3-208ENST00000565379 TGFB3P10600 412 aa29.44■■■□□ 2.3
NME3-208ENST00000565379 RAG1P15918 1043 aa29.44■■■□□ 2.3
NME3-208ENST00000565379 GCFC2P16383 781 aaKnown RBP29.44■■■□□ 2.3
NME3-208ENST00000565379 TRAPPC10P48553 1259 aa29.44■■■□□ 2.3
NME3-208ENST00000565379 INF2Q27J81 1249 aa29.44■■■□□ 2.3
NME3-208ENST00000565379 BRAPQ7Z569 592 aa29.44■■■□□ 2.3
NME3-208ENST00000565379 MXRA8Q9BRK3 442 aa29.44■■■□□ 2.3
NME3-208ENST00000565379 JADE2Q9NQC1 790 aa29.44■■■□□ 2.3
NME3-208ENST00000565379 NOL7Q9UMY1 257 aaKnown RBP29.44■■■□□ 2.3
NME3-208ENST00000565379 MTMR6Q9Y217 621 aa29.44■■■□□ 2.3
NME3-208ENST00000565379 ARIH2O95376 493 aa29.43■■■□□ 2.3
NME3-208ENST00000565379 ICAM3P32942 547 aa29.43■■■□□ 2.3
NME3-208ENST00000565379 SETQ01105 290 aaPredicted RBP29.43■■■□□ 2.3
NME3-208ENST00000565379 TTLL4Q14679 1199 aa29.43■■■□□ 2.3
NME3-208ENST00000565379 FAM126BQ8IXS8 530 aa29.43■■■□□ 2.3
NME3-208ENST00000565379 PPP1R13LQ8WUF5 828 aa29.43■■■□□ 2.3
NME3-208ENST00000565379 ZSCAN16Q9H4T2 348 aaPredicted RBP29.43■■■□□ 2.3
NME3-208ENST00000565379 A0A0C4DFX4 3053 aa29.43■■■□□ 2.3
NME3-208ENST00000565379 CYP3A7-CYP3A51PA0A087WV96 503 aa29.42■■■□□ 2.3
NME3-208ENST00000565379 FIBPO43427 364 aa29.42■■■□□ 2.3
NME3-208ENST00000565379 CYP3A7P24462 503 aa29.42■■■□□ 2.3
NME3-208ENST00000565379 EARS2Q5JPH6 523 aaKnown RBP29.42■■■□□ 2.3
NME3-208ENST00000565379 PPP4R3AQ6IN85 833 aa29.42■■■□□ 2.3
NME3-208ENST00000565379 RTEL1Q9NZ71 1219 aa29.42■■■□□ 2.3
NME3-208ENST00000565379 KIF28PB7ZC32 967 aa29.41■■■□□ 2.3
NME3-208ENST00000565379 MEIS1O00470 390 aa29.41■■■□□ 2.3
NME3-208ENST00000565379 NKRFO15226 690 aaKnown RBP eCLIP29.41■■■□□ 2.3
NME3-208ENST00000565379 ITGB5P18084 799 aa29.41■■■□□ 2.3
NME3-208ENST00000565379 ORC2Q13416 577 aaPredicted RBP29.41■■■□□ 2.3
NME3-208ENST00000565379 SEPT14Q6ZU15 432 aa29.41■■■□□ 2.3
NME3-208ENST00000565379 SLC43A3Q8NBI5 491 aa29.41■■■□□ 2.3
NME3-208ENST00000565379 Q9Y3F1 56 aa29.41■■■□□ 2.3
NME3-208ENST00000565379 RGS20O76081 388 aa29.4■■■□□ 2.3
NME3-208ENST00000565379 MTMR1Q13613 665 aa29.4■■■□□ 2.3
NME3-208ENST00000565379 ITGA7Q13683 1181 aa29.4■■■□□ 2.3
NME3-208ENST00000565379 LETM2Q2VYF4 491 aa29.4■■■□□ 2.3
NME3-208ENST00000565379 RILPL1Q5EBL4 403 aa29.4■■■□□ 2.3
NME3-208ENST00000565379 OR6J1Q8NGC5 347 aa29.4■■■□□ 2.3
NME3-208ENST00000565379 PPP1R12CQ9BZL4 782 aa29.4■■■□□ 2.3
NME3-208ENST00000565379 MRVI1Q9Y6F6 885 aa29.4■■■□□ 2.3
NME3-208ENST00000565379 SPATA31C2B4DYI2 1134 aa29.39■■■□□ 2.3
NME3-208ENST00000565379 Q4G0T1 1027 aa29.39■■■□□ 2.3
NME3-208ENST00000565379 ZNF697Q5TEC3 545 aa29.39■■■□□ 2.3
NME3-208ENST00000565379 GIMAP8Q8ND71 665 aaPredicted RBP29.39■■■□□ 2.3
NME3-208ENST00000565379 MBOAT7Q96N66 472 aa29.39■■■□□ 2.3
NME3-208ENST00000565379 GUCD1Q96NT3 240 aa29.39■■■□□ 2.3
NME3-208ENST00000565379 TIMP1P01033 207 aa29.38■■■□□ 2.29
NME3-208ENST00000565379 CD4P01730 458 aa29.38■■■□□ 2.29
NME3-208ENST00000565379 FPGSQ05932 587 aa29.38■■■□□ 2.29
NME3-208ENST00000565379 PLA2G4DQ86XP0 818 aa29.38■■■□□ 2.29
NME3-208ENST00000565379 SENP7Q9BQF6 1050 aa29.38■■■□□ 2.29
NME3-208ENST00000565379 TRPV6Q9H1D0 765 aa29.38■■■□□ 2.29
NME3-208ENST00000565379 UMODL1Q5DID0 1318 aa29.38■■■□□ 2.29
NME3-208ENST00000565379 IGLV3-22A0A075B6J6 115 aa29.37■■■□□ 2.29
NME3-208ENST00000565379 FAM86B1E9PN63 330 aa29.37■■■□□ 2.29
NME3-208ENST00000565379 MYL3P08590 195 aa29.37■■■□□ 2.29
NME3-208ENST00000565379 FAM86B2P0C5J1 330 aa29.37■■■□□ 2.29
NME3-208ENST00000565379 ZSCAN22P10073 491 aaPredicted RBP29.37■■■□□ 2.29
NME3-208ENST00000565379 TXNP10599 105 aaKnown RBP29.37■■■□□ 2.29
NME3-208ENST00000565379 CCDC62Q6P9F0 684 aa29.37■■■□□ 2.29
NME3-208ENST00000565379 FAM161BQ96MY7 647 aa29.37■■■□□ 2.29
NME3-208ENST00000565379 MROH7Q68CQ1 1323 aa29.37■■■□□ 2.29
NME3-208ENST00000565379 CUL9Q8IWT3 2517 aa29.37■■■□□ 2.29
NME3-208ENST00000565379 MYH7BA7E2Y1 1941 aa29.36■■■□□ 2.29
NME3-208ENST00000565379 FAM205CA6NFA0 338 aa29.36■■■□□ 2.29
NME3-208ENST00000565379 EDIL3O43854 480 aa29.36■■■□□ 2.29
NME3-208ENST00000565379 CCNT1O60563 726 aaKnown RBP29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms