RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 TNIP2Q8NFZ5 429 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 FNDC8Q8TC99 324 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 ASAP3Q8TDY4 903 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 STK32AQ8WU08 396 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 ATL1Q8WXF7 558 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 SDCCAG3Q96C92 435 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 XPO6Q96QU8 1125 aaKnown RBP6.84□□□□□ -1.31
PTPN9-204ENST00000564970 RPS6KC1Q96S38 1066 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 LLPHQ9BRT6 129 aaKnown RBP6.84□□□□□ -1.31
PTPN9-204ENST00000564970 VPS16Q9H269 839 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 DCLRE1BQ9H816 532 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 C12orf10Q9HB07 376 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 TXLNGQ9NUQ3 528 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 ATAD3AQ9NVI7 634 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 RHBDL2Q9NX52 303 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 STK39Q9UEW8 545 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 STAP2Q9UGK3 403 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 INTUQ9ULD6 942 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 WWC3Q9ULE0 1092 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 CCPG1Q9ULG6 757 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 TBC1D30Q9Y2I9 924 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 HBS1LQ9Y450 684 aaKnown RBP6.84□□□□□ -1.31
PTPN9-204ENST00000564970 ZNF518AQ6AHZ1 1483 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 CROCC2H7BZ55 1655 aa6.84□□□□□ -1.32
PTPN9-204ENST00000564970 IQGAP1P46940 1657 aa6.84□□□□□ -1.32
PTPN9-204ENST00000564970 PNPLA6Q8IY17 1366 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 SBNO2Q9Y2G9 1366 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 ITIH6Q6UXX5 1313 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 A0A0G2JS52 829 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 ARHGAP10A1A4S6 786 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 CENPBD1B2RD01 187 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 AREL1O15033 823 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 SERPINB7O75635 380 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 GLRX3O76003 335 aaKnown RBP6.83□□□□□ -1.32
PTPN9-204ENST00000564970 APOEP02649 317 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 MYZAPP0CAP1 466 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 ZNF12P17014 697 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 VARSP26640 1264 aaKnown RBP6.83□□□□□ -1.32
PTPN9-204ENST00000564970 HMOX2P30519 316 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 PRKAR2BP31323 418 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 PHBP35232 272 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 EPS15P42566 896 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 PTDSS1P48651 473 aaKnown RBP6.83□□□□□ -1.32
PTPN9-204ENST00000564970 CACNA2D1P54289 1103 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 EIF3BP55884 814 aaKnown RBP6.83□□□□□ -1.32
PTPN9-204ENST00000564970 DHX9Q08211 1270 aaKnown RBP6.83□□□□□ -1.32
PTPN9-204ENST00000564970 TRAP1Q12931 704 aaKnown RBP6.83□□□□□ -1.32
PTPN9-204ENST00000564970 DNAJC3Q13217 504 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 DPYSQ14117 519 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 SKIDA1Q1XH10 827 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 C15orf59Q2T9L4 293 aaPredicted RBP6.83□□□□□ -1.32
PTPN9-204ENST00000564970 ARL13BQ3SXY8 428 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 LIN52Q52LA3 116 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 TTMPQ5BVD1 217 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 DENND2CQ68D51 928 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 CCDC62Q6P9F0 684 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 OLFM4Q6UX06 510 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 TMC4Q7Z404 712 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 GRAMD2AQ8IUY3 354 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 SAMD14Q8IZD0 417 aaPredicted RBP6.83□□□□□ -1.32
PTPN9-204ENST00000564970 SPARTQ8N0X7 666 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 NOA1Q8NC60 698 aaKnown RBP6.83□□□□□ -1.32
PTPN9-204ENST00000564970 TOR1AIP2Q8NFQ8 470 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 PLEKHO2Q8TD55 490 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 MRPS27Q92552 414 aaKnown RBP6.83□□□□□ -1.32
PTPN9-204ENST00000564970 KLHL29Q96CT2 875 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 TCF12Q99081 682 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 RIOK1Q9BRS2 568 aaKnown RBP6.83□□□□□ -1.32
PTPN9-204ENST00000564970 CARD14Q9BXL6 1004 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 PPP1R12CQ9BZL4 782 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 SLC7A5P2Q9GIP4 190 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 STMN4Q9H169 189 aaPredicted RBP6.83□□□□□ -1.32
PTPN9-204ENST00000564970 PLCB1Q9NQ66 1216 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 PFDN4Q9NQP4 134 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.83□□□□□ -1.32
PTPN9-204ENST00000564970 GIN1Q9NXP7 522 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 DDX43Q9NXZ2 648 aaKnown RBP6.83□□□□□ -1.32
PTPN9-204ENST00000564970 CYP39A1Q9NYL5 469 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 ZNF219Q9P2Y4 722 aaPredicted RBP6.83□□□□□ -1.32
PTPN9-204ENST00000564970 SLC12A6Q9UHW9 1150 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 TSKSQ9UJT2 592 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 TMCC3Q9ULS5 477 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 TNNQ9UQP3 1299 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 MRPL11Q9Y3B7 192 aaKnown RBP6.83□□□□□ -1.32
PTPN9-204ENST00000564970 TSC22D4Q9Y3Q8 395 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 CYP46A1Q9Y6A2 500 aa6.83□□□□□ -1.32
PTPN9-204ENST00000564970 MAST1Q9Y2H9 1570 aa6.82□□□□□ -1.32
PTPN9-204ENST00000564970 FER1L4A9Z1Z3 1794 aa6.82□□□□□ -1.32
PTPN9-204ENST00000564970 ADGRB3O60242 1522 aa6.82□□□□□ -1.32
PTPN9-204ENST00000564970 GPATCH8Q9UKJ3 1502 aaKnown RBP6.82□□□□□ -1.32
PTPN9-204ENST00000564970 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.82□□□□□ -1.32
PTPN9-204ENST00000564970 PVALEFA0A1B0GWK0 134 aa6.82□□□□□ -1.32
PTPN9-204ENST00000564970 ANKRD62A6NC57 917 aa6.82□□□□□ -1.32
PTPN9-204ENST00000564970 FAM47E-STBD1D6RA91 191 aa6.82□□□□□ -1.32
PTPN9-204ENST00000564970 E9PBE3 544 aa6.82□□□□□ -1.32
PTPN9-204ENST00000564970 GOLGA8MH3BSY2 632 aa6.82□□□□□ -1.32
PTPN9-204ENST00000564970 CHL1O00533 1208 aa6.82□□□□□ -1.32
PTPN9-204ENST00000564970 NDC80O14777 642 aa6.82□□□□□ -1.32
PTPN9-204ENST00000564970 NVLO15381 856 aaKnown RBP6.82□□□□□ -1.32
PTPN9-204ENST00000564970 TEX28O15482 410 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms