RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 LETM2Q2VYF4 491 aa18.15■□□□□ 0.5
RAB40C-208ENST00000564703 LARP1BQ659C4 914 aaKnown RBP18.15■□□□□ 0.5
RAB40C-208ENST00000564703 NEK8Q86SG6 692 aa18.15■□□□□ 0.5
RAB40C-208ENST00000564703 CRYGNQ8WXF5 182 aa18.15■□□□□ 0.5
RAB40C-208ENST00000564703 TCEAL9Q9UHQ7 104 aa18.15■□□□□ 0.5
RAB40C-208ENST00000564703 MARCH6O60337 910 aa18.14■□□□□ 0.49
RAB40C-208ENST00000564703 ATP9AO75110 1047 aa18.14■□□□□ 0.49
RAB40C-208ENST00000564703 SP4Q02446 784 aa18.14■□□□□ 0.49
RAB40C-208ENST00000564703 NR5A1Q13285 461 aa18.14■□□□□ 0.49
RAB40C-208ENST00000564703 INTS4Q96HW7 963 aaKnown RBP18.14■□□□□ 0.49
RAB40C-208ENST00000564703 ZNF577Q9BSK1 485 aa18.14■□□□□ 0.49
RAB40C-208ENST00000564703 MTG1Q9BT17 334 aaPredicted RBP18.14■□□□□ 0.49
RAB40C-208ENST00000564703 SEZ6LQ9BYH1 1024 aa18.14■□□□□ 0.49
RAB40C-208ENST00000564703 FOXP1Q9H334 677 aaPredicted RBP18.14■□□□□ 0.49
RAB40C-208ENST00000564703 MMP3P08254 477 aa18.13■□□□□ 0.49
RAB40C-208ENST00000564703 KCNA2P16389 499 aa18.13■□□□□ 0.49
RAB40C-208ENST00000564703 PDCP20941 246 aa18.13■□□□□ 0.49
RAB40C-208ENST00000564703 CHMP4BP1P59074 171 aa18.13■□□□□ 0.49
RAB40C-208ENST00000564703 PURAQ00577 322 aaKnown RBP18.13■□□□□ 0.49
RAB40C-208ENST00000564703 HSDL1Q3SXM5 330 aa18.13■□□□□ 0.49
RAB40C-208ENST00000564703 MCTP1Q6DN14 999 aa18.13■□□□□ 0.49
RAB40C-208ENST00000564703 MOXD1Q6UVY6 613 aa18.13■□□□□ 0.49
RAB40C-208ENST00000564703 SEPT1Q8WYJ6 367 aa18.13■□□□□ 0.49
RAB40C-208ENST00000564703 AGO4Q9HCK5 861 aaKnown RBP18.13■□□□□ 0.49
RAB40C-208ENST00000564703 TBC1D22BQ9NU19 505 aa18.13■□□□□ 0.49
RAB40C-208ENST00000564703 NR2E3Q9Y5X4 410 aa18.13■□□□□ 0.49
RAB40C-208ENST00000564703 CYP3A7-CYP3A51PA0A087WV96 503 aa18.12■□□□□ 0.49
RAB40C-208ENST00000564703 A0A0U1RQG5 324 aaPredicted RBP18.12■□□□□ 0.49
RAB40C-208ENST00000564703 IPO5O00410 1097 aaKnown RBP18.12■□□□□ 0.49
RAB40C-208ENST00000564703 CCNT1O60563 726 aaKnown RBP18.12■□□□□ 0.49
RAB40C-208ENST00000564703 GCFC2P16383 781 aaKnown RBP18.12■□□□□ 0.49
RAB40C-208ENST00000564703 CYP3A7P24462 503 aa18.12■□□□□ 0.49
RAB40C-208ENST00000564703 ITGA7Q13683 1181 aa18.12■□□□□ 0.49
RAB40C-208ENST00000564703 BCAS3Q9H6U6 928 aa18.12■□□□□ 0.49
RAB40C-208ENST00000564703 JPH1Q9HDC5 661 aaPredicted RBP18.12■□□□□ 0.49
RAB40C-208ENST00000564703 SLC9A2Q9UBY0 812 aa18.12■□□□□ 0.49
RAB40C-208ENST00000564703 NFASCO94856 1347 aa18.12■□□□□ 0.49
RAB40C-208ENST00000564703 IGLV3-22A0A075B6J6 115 aa18.11■□□□□ 0.49
RAB40C-208ENST00000564703 LRRC26Q2I0M4 334 aa18.11■□□□□ 0.49
RAB40C-208ENST00000564703 Q4G0T1 1027 aa18.11■□□□□ 0.49
RAB40C-208ENST00000564703 C1orf53Q5VUE5 145 aa18.11■□□□□ 0.49
RAB40C-208ENST00000564703 PPP4R3AQ6IN85 833 aa18.11■□□□□ 0.49
RAB40C-208ENST00000564703 GPR20Q99678 358 aa18.11■□□□□ 0.49
RAB40C-208ENST00000564703 KATNAL1Q9BW62 490 aa18.11■□□□□ 0.49
RAB40C-208ENST00000564703 DDX25Q9UHL0 483 aaKnown RBP18.11■□□□□ 0.49
RAB40C-208ENST00000564703 ATP11BQ9Y2G3 1177 aa18.11■□□□□ 0.49
RAB40C-208ENST00000564703 MROH7Q68CQ1 1323 aa18.1■□□□□ 0.49
RAB40C-208ENST00000564703 DCDC2CA8MYV0 355 aa18.1■□□□□ 0.49
RAB40C-208ENST00000564703 ARVCFO00192 962 aa18.1■□□□□ 0.49
RAB40C-208ENST00000564703 BAG4O95429 457 aaKnown RBP18.1■□□□□ 0.49
RAB40C-208ENST00000564703 ATP2B1P20020 1258 aa18.1■□□□□ 0.49
RAB40C-208ENST00000564703 RTP1P59025 263 aa18.1■□□□□ 0.49
RAB40C-208ENST00000564703 TNFRSF25Q93038 417 aa18.1■□□□□ 0.49
RAB40C-208ENST00000564703 UIMC1Q96RL1 719 aa18.1■□□□□ 0.49
RAB40C-208ENST00000564703 FOXD4L1Q9NU39 408 aa18.1■□□□□ 0.49
RAB40C-208ENST00000564703 PRKAG2Q9UGJ0 569 aa18.1■□□□□ 0.49
RAB40C-208ENST00000564703 NOL7Q9UMY1 257 aaKnown RBP18.1■□□□□ 0.49
RAB40C-208ENST00000564703 DDX39AO00148 427 aaKnown RBP18.09■□□□□ 0.49
RAB40C-208ENST00000564703 TLR3O15455 904 aaKnown RBP18.09■□□□□ 0.49
RAB40C-208ENST00000564703 TDP2O95551 362 aa18.09■□□□□ 0.49
RAB40C-208ENST00000564703 PSMC6P62333 389 aa18.09■□□□□ 0.49
RAB40C-208ENST00000564703 FAM47CQ5HY64 1035 aa18.09■□□□□ 0.49
RAB40C-208ENST00000564703 EARS2Q5JPH6 523 aaKnown RBP18.09■□□□□ 0.49
RAB40C-208ENST00000564703 UTP14CQ5TAP6 766 aaKnown RBP18.09■□□□□ 0.49
RAB40C-208ENST00000564703 NOSTRINQ8IVI9 506 aa18.09■□□□□ 0.49
RAB40C-208ENST00000564703 RIT2Q99578 217 aa18.09■□□□□ 0.49
RAB40C-208ENST00000564703 AZI2Q9H6S1 392 aa18.09■□□□□ 0.49
RAB40C-208ENST00000564703 H3BRB1 525 aa18.08■□□□□ 0.48
RAB40C-208ENST00000564703 MSH4O15457 936 aa18.08■□□□□ 0.48
RAB40C-208ENST00000564703 EDIL3O43854 480 aa18.08■□□□□ 0.48
RAB40C-208ENST00000564703 PQBP1O60828 265 aaKnown RBP18.08■□□□□ 0.48
RAB40C-208ENST00000564703 GAS7O60861 476 aa18.08■□□□□ 0.48
RAB40C-208ENST00000564703 U2AF2P26368 475 aaKnown RBP eCLIP18.08■□□□□ 0.48
RAB40C-208ENST00000564703 TCF7P36402 384 aaPredicted RBP18.08■□□□□ 0.48
RAB40C-208ENST00000564703 KRT76Q01546 638 aa18.08■□□□□ 0.48
RAB40C-208ENST00000564703 TLE2Q04725 743 aa18.08■□□□□ 0.48
RAB40C-208ENST00000564703 ITGB3BPQ13352 177 aaPredicted RBP18.08■□□□□ 0.48
RAB40C-208ENST00000564703 NBPF20Q3BBV1 942 aa18.08■□□□□ 0.48
RAB40C-208ENST00000564703 TRIM60Q495X7 471 aa18.08■□□□□ 0.48
RAB40C-208ENST00000564703 C7orf61Q8IZ16 206 aa18.08■□□□□ 0.48
RAB40C-208ENST00000564703 GLG1Q92896 1179 aa18.08■□□□□ 0.48
RAB40C-208ENST00000564703 FAM20AQ96MK3 541 aa18.08■□□□□ 0.48
RAB40C-208ENST00000564703 TEKT3Q9BXF9 490 aa18.08■□□□□ 0.48
RAB40C-208ENST00000564703 TUT1Q9H6E5 874 aaKnown RBP18.08■□□□□ 0.48
RAB40C-208ENST00000564703 ZNF215Q9UL58 517 aaPredicted RBP18.08■□□□□ 0.48
RAB40C-208ENST00000564703 SAMM50Q9Y512 469 aa18.08■□□□□ 0.48
RAB40C-208ENST00000564703 GSTTP1A0A1W2PQM5 241 aa18.07■□□□□ 0.48
RAB40C-208ENST00000564703 FAM205CA6NFA0 338 aa18.07■□□□□ 0.48
RAB40C-208ENST00000564703 LGALS2P05162 132 aa18.07■□□□□ 0.48
RAB40C-208ENST00000564703 ZNF286BP0CG31 522 aa18.07■□□□□ 0.48
RAB40C-208ENST00000564703 HOXD8P13378 290 aaPredicted RBP18.07■□□□□ 0.48
RAB40C-208ENST00000564703 PSEN2P49810 448 aa18.07■□□□□ 0.48
RAB40C-208ENST00000564703 CDK7P50613 346 aa18.07■□□□□ 0.48
RAB40C-208ENST00000564703 ACTR2P61160 394 aa18.07■□□□□ 0.48
RAB40C-208ENST00000564703 BECN1Q14457 450 aa18.07■□□□□ 0.48
RAB40C-208ENST00000564703 MFSD10Q14728 455 aa18.07■□□□□ 0.48
RAB40C-208ENST00000564703 SNX17Q15036 470 aa18.07■□□□□ 0.48
RAB40C-208ENST00000564703 KIAA0753Q2KHM9 967 aa18.07■□□□□ 0.48
RAB40C-208ENST00000564703 LRCH2Q5VUJ6 765 aa18.07■□□□□ 0.48
RAB40C-208ENST00000564703 MIS18BP1Q6P0N0 1132 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms