RNA–Protein interactions for RNA: ENST00000564317.5

CDH11-209, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-209ENST00000564317 TBX3O15119 743 aa17.56■□□□□ 0.4
CDH11-209ENST00000564317 NKRFO15226 690 aaKnown RBP eCLIP17.56■□□□□ 0.4
CDH11-209ENST00000564317 CTAGE5O15320 804 aa17.56■□□□□ 0.4
CDH11-209ENST00000564317 FARP2O94887 1054 aaPredicted RBP17.56■□□□□ 0.4
CDH11-209ENST00000564317 RARBP10826 455 aa17.56■□□□□ 0.4
CDH11-209ENST00000564317 DNM1Q05193 864 aaKnown RBP17.56■□□□□ 0.4
CDH11-209ENST00000564317 PTGDRQ13258 359 aa17.56■□□□□ 0.4
CDH11-209ENST00000564317 NEDD9Q14511 834 aa17.56■□□□□ 0.4
CDH11-209ENST00000564317 PTPAQ15257 358 aa17.56■□□□□ 0.4
CDH11-209ENST00000564317 SF3A1Q15459 793 aaKnown RBP17.56■□□□□ 0.4
CDH11-209ENST00000564317 CYFIP1Q7L576 1253 aa17.56■□□□□ 0.4
CDH11-209ENST00000564317 OR6J1Q8NGC5 347 aa17.56■□□□□ 0.4
CDH11-209ENST00000564317 DEFB118Q96PH6 123 aa17.56■□□□□ 0.4
CDH11-209ENST00000564317 UPF3AQ9H1J1 476 aaKnown RBP17.56■□□□□ 0.4
CDH11-209ENST00000564317 DYNC1LI2O43237 492 aaPredicted RBP17.55■□□□□ 0.4
CDH11-209ENST00000564317 ADAMTS4O75173 837 aa17.55■□□□□ 0.4
CDH11-209ENST00000564317 PSMD10O75832 226 aa17.55■□□□□ 0.4
CDH11-209ENST00000564317 CCNE2O96020 404 aa17.55■□□□□ 0.4
CDH11-209ENST00000564317 PGK1P00558 417 aa17.55■□□□□ 0.4
CDH11-209ENST00000564317 OR52Z1P0C646 297 aa17.55■□□□□ 0.4
CDH11-209ENST00000564317 ATP2C1P98194 919 aaPredicted RBP17.55■□□□□ 0.4
CDH11-209ENST00000564317 SP4Q02446 784 aa17.55■□□□□ 0.4
CDH11-209ENST00000564317 CEBPZQ03701 1054 aaKnown RBP17.55■□□□□ 0.4
CDH11-209ENST00000564317 LRCH2Q5VUJ6 765 aa17.55■□□□□ 0.4
CDH11-209ENST00000564317 METTL7BQ6UX53 244 aa17.55■□□□□ 0.4
CDH11-209ENST00000564317 DHX37Q8IY37 1157 aaKnown RBP17.55■□□□□ 0.4
CDH11-209ENST00000564317 EMID1Q96A84 441 aaPredicted RBP17.55■□□□□ 0.4
CDH11-209ENST00000564317 FAM20AQ96MK3 541 aa17.55■□□□□ 0.4
CDH11-209ENST00000564317 ZNF396Q96N95 335 aaPredicted RBP17.55■□□□□ 0.4
CDH11-209ENST00000564317 RIT2Q99578 217 aa17.55■□□□□ 0.4
CDH11-209ENST00000564317 SDF4Q9BRK5 362 aa17.55■□□□□ 0.4
CDH11-209ENST00000564317 JPH1Q9HDC5 661 aaPredicted RBP17.55■□□□□ 0.4
CDH11-209ENST00000564317 XPNPEP3Q9NQH7 507 aa17.55■□□□□ 0.4
CDH11-209ENST00000564317 TFIP11Q9UBB9 837 aaKnown RBP17.55■□□□□ 0.4
CDH11-209ENST00000564317 VAV3Q9UKW4 847 aa17.55■□□□□ 0.4
CDH11-209ENST00000564317 Q9Y3F1 56 aa17.55■□□□□ 0.4
CDH11-209ENST00000564317 FRMPD3Q5JV73 1810 aa17.55■□□□□ 0.4
CDH11-209ENST00000564317 DOCK5Q9H7D0 1870 aa17.54■□□□□ 0.4
CDH11-209ENST00000564317 MSCO60682 206 aa17.54■□□□□ 0.4
CDH11-209ENST00000564317 GAS7O60861 476 aa17.54■□□□□ 0.4
CDH11-209ENST00000564317 NASPP49321 788 aaPredicted RBP17.54■□□□□ 0.4
CDH11-209ENST00000564317 GJA9P57773 515 aa17.54■□□□□ 0.4
CDH11-209ENST00000564317 B3GNT9Q6UX72 402 aa17.54■□□□□ 0.4
CDH11-209ENST00000564317 GIMAP8Q8ND71 665 aaPredicted RBP17.54■□□□□ 0.4
CDH11-209ENST00000564317 AFG1LQ8WV93 481 aa17.54■□□□□ 0.4
CDH11-209ENST00000564317 UNC45AQ9H3U1 944 aa17.54■□□□□ 0.4
CDH11-209ENST00000564317 MLXIPQ9HAP2 919 aa17.54■□□□□ 0.4
CDH11-209ENST00000564317 TBC1D22BQ9NU19 505 aa17.54■□□□□ 0.4
CDH11-209ENST00000564317 SLC9A2Q9UBY0 812 aa17.54■□□□□ 0.4
CDH11-209ENST00000564317 TXKP42681 527 aa17.53■□□□□ 0.4
CDH11-209ENST00000564317 NKX3-2P78367 333 aa17.53■□□□□ 0.4
CDH11-209ENST00000564317 BEX3Q00994 111 aa17.53■□□□□ 0.4
CDH11-209ENST00000564317 SPIRE1Q08AE8 756 aa17.53■□□□□ 0.4
CDH11-209ENST00000564317 LAMC2Q13753 1193 aa17.53■□□□□ 0.4
CDH11-209ENST00000564317 IL17AQ16552 155 aa17.53■□□□□ 0.4
CDH11-209ENST00000564317 HSDL1Q3SXM5 330 aa17.53■□□□□ 0.4
CDH11-209ENST00000564317 SLFN12Q8IYM2 578 aa17.53■□□□□ 0.4
CDH11-209ENST00000564317 SPATA33Q96N06 139 aa17.53■□□□□ 0.4
CDH11-209ENST00000564317 GPR20Q99678 358 aa17.53■□□□□ 0.4
CDH11-209ENST00000564317 TEKT3Q9BXF9 490 aa17.53■□□□□ 0.4
CDH11-209ENST00000564317 AP5M1Q9H0R1 490 aa17.53■□□□□ 0.4
CDH11-209ENST00000564317 POLR3EQ9NVU0 708 aa17.53■□□□□ 0.4
CDH11-209ENST00000564317 CHMP2AO43633 222 aa17.52■□□□□ 0.4
CDH11-209ENST00000564317 MARCH6O60337 910 aa17.52■□□□□ 0.4
CDH11-209ENST00000564317 BAG4O95429 457 aaKnown RBP17.52■□□□□ 0.4
CDH11-209ENST00000564317 GJB1P08034 283 aa17.52■□□□□ 0.4
CDH11-209ENST00000564317 MMP3P08254 477 aa17.52■□□□□ 0.4
CDH11-209ENST00000564317 ACTR2P61160 394 aa17.52■□□□□ 0.4
CDH11-209ENST00000564317 FSCN1Q16658 493 aaKnown RBP17.52■□□□□ 0.4
CDH11-209ENST00000564317 KLHDC9Q8NEP7 349 aa17.52■□□□□ 0.4
CDH11-209ENST00000564317 PPTC7Q8NI37 304 aa17.52■□□□□ 0.4
CDH11-209ENST00000564317 U2AF1L4Q8WU68 220 aaKnown RBP17.52■□□□□ 0.4
CDH11-209ENST00000564317 CRISPLD2Q9H0B8 497 aa17.52■□□□□ 0.4
CDH11-209ENST00000564317 ELP1O95163 1332 aa17.51■□□□□ 0.39
CDH11-209ENST00000564317 GSTTP1A0A1W2PQM5 241 aa17.51■□□□□ 0.39
CDH11-209ENST00000564317 A6NJR5 290 aa17.51■□□□□ 0.39
CDH11-209ENST00000564317 EML1O00423 815 aa17.51■□□□□ 0.39
CDH11-209ENST00000564317 LAD1O00515 517 aa17.51■□□□□ 0.39
CDH11-209ENST00000564317 BMP15O95972 392 aa17.51■□□□□ 0.39
CDH11-209ENST00000564317 C6orf222P0C671 652 aaPredicted RBP17.51■□□□□ 0.39
CDH11-209ENST00000564317 HOXD8P13378 290 aaPredicted RBP17.51■□□□□ 0.39
CDH11-209ENST00000564317 CST5P28325 142 aaPredicted RBP17.51■□□□□ 0.39
CDH11-209ENST00000564317 PRPHP41219 470 aa17.51■□□□□ 0.39
CDH11-209ENST00000564317 KRT76Q01546 638 aa17.51■□□□□ 0.39
CDH11-209ENST00000564317 GRIN1Q05586 938 aa17.51■□□□□ 0.39
CDH11-209ENST00000564317 PPP2R5CQ13362 524 aa17.51■□□□□ 0.39
CDH11-209ENST00000564317 SLC39A14Q15043 492 aa17.51■□□□□ 0.39
CDH11-209ENST00000564317 LRRC41Q15345 812 aa17.51■□□□□ 0.39
CDH11-209ENST00000564317 CCSAPQ6IQ19 270 aaPredicted RBP17.51■□□□□ 0.39
CDH11-209ENST00000564317 ZNF746Q6NUN9 644 aaPredicted RBP17.51■□□□□ 0.39
CDH11-209ENST00000564317 LINC00301Q8NCQ3 95 aa17.51■□□□□ 0.39
CDH11-209ENST00000564317 TTC12Q9H892 705 aaPredicted RBP17.51■□□□□ 0.39
CDH11-209ENST00000564317 OGDHLQ9ULD0 1010 aa17.51■□□□□ 0.39
CDH11-209ENST00000564317 CEP131Q9UPN4 1083 aa17.51■□□□□ 0.39
CDH11-209ENST00000564317 ATP6V1DQ9Y5K8 247 aa17.51■□□□□ 0.39
CDH11-209ENST00000564317 POTEMA6NI47 508 aa17.5■□□□□ 0.39
CDH11-209ENST00000564317 SGPL1O95470 568 aa17.5■□□□□ 0.39
CDH11-209ENST00000564317 YEATS4O95619 227 aa17.5■□□□□ 0.39
CDH11-209ENST00000564317 MYCNP04198 464 aaPredicted RBP17.5■□□□□ 0.39
CDH11-209ENST00000564317 MARCKSP29966 332 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms