RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-208	ENST00000563911	ZDHHC13	Q8IUH4	622 aa		7.94	□□□□□ -1.14
HERPUD1-208	ENST00000563911	SPACA3	Q8IXA5	215 aa		7.94	□□□□□ -1.14
HERPUD1-208	ENST00000563911	PLD6	Q8N2A8	252 aa	Known RBP	7.94	□□□□□ -1.14
HERPUD1-208	ENST00000563911	ZNF655	Q8N720	491 aa	Predicted RBP	7.94	□□□□□ -1.14
HERPUD1-208	ENST00000563911	UBE2F	Q969M7	185 aa		7.94	□□□□□ -1.14
HERPUD1-208	ENST00000563911	HDAC8	Q9BY41	377 aa		7.94	□□□□□ -1.14
HERPUD1-208	ENST00000563911	PLAGL2	Q9UPG8	496 aa		7.94	□□□□□ -1.14
HERPUD1-208	ENST00000563911	GPR55	Q9Y2T6	319 aa	Predicted RBP	7.94	□□□□□ -1.14
HERPUD1-208	ENST00000563911	MAP2	P11137	1827 aa	Known RBP	7.94	□□□□□ -1.14
HERPUD1-208	ENST00000563911	EDC4	Q6P2E9	1401 aa	Known RBP	7.94	□□□□□ -1.14
HERPUD1-208	ENST00000563911	WDR90	Q96KV7	1748 aa		7.93	□□□□□ -1.14
HERPUD1-208	ENST00000563911	N4BP2	Q86UW6	1770 aa	Predicted RBP	7.93	□□□□□ -1.14
HERPUD1-208	ENST00000563911	TRBV23-1	A0A0A0MS06	115 aa		7.93	□□□□□ -1.14
HERPUD1-208	ENST00000563911	GSN	P06396	782 aa		7.93	□□□□□ -1.14
HERPUD1-208	ENST00000563911	SRF	P11831	508 aa		7.93	□□□□□ -1.14
HERPUD1-208	ENST00000563911	PABPC1	P11940	636 aa	Known RBP	7.93	□□□□□ -1.14
HERPUD1-208	ENST00000563911	DPEP1	P16444	411 aa		7.93	□□□□□ -1.14
HERPUD1-208	ENST00000563911	KCNJ6	P48051	423 aa		7.93	□□□□□ -1.14
HERPUD1-208	ENST00000563911	PRELP	P51888	382 aa		7.93	□□□□□ -1.14
HERPUD1-208	ENST00000563911	POU4F1	Q01851	419 aa		7.93	□□□□□ -1.14
HERPUD1-208	ENST00000563911	GRB10	Q13322	594 aa		7.93	□□□□□ -1.14
HERPUD1-208	ENST00000563911	TCEA2	Q15560	299 aa		7.93	□□□□□ -1.14
HERPUD1-208	ENST00000563911	IFI16	Q16666	785 aa	Known RBP	7.93	□□□□□ -1.14
HERPUD1-208	ENST00000563911	HSP90AB2P	Q58FF8	381 aa		7.93	□□□□□ -1.14
HERPUD1-208	ENST00000563911	CRTC3	Q6UUV7	619 aa		7.93	□□□□□ -1.14
HERPUD1-208	ENST00000563911	NSMF	Q6X4W1	530 aa		7.93	□□□□□ -1.14
HERPUD1-208	ENST00000563911	SCUBE1	Q8IWY4	988 aa		7.93	□□□□□ -1.14
HERPUD1-208	ENST00000563911	NETO1	Q8TDF5	533 aa		7.93	□□□□□ -1.14
HERPUD1-208	ENST00000563911	TCTN2	Q96GX1	697 aa		7.93	□□□□□ -1.14
HERPUD1-208	ENST00000563911	IER2	Q9BTL4	223 aa		7.93	□□□□□ -1.14
HERPUD1-208	ENST00000563911	DHRS4	Q9BTZ2	278 aa		7.93	□□□□□ -1.14
HERPUD1-208	ENST00000563911	SLK	Q9H2G2	1235 aa	Predicted RBP	7.93	□□□□□ -1.14
HERPUD1-208	ENST00000563911	ROCK2	O75116	1388 aa	Known RBP	7.93	□□□□□ -1.14
HERPUD1-208	ENST00000563911	CCDC163	A0A0D9SF12	145 aa		7.92	□□□□□ -1.14
HERPUD1-208	ENST00000563911	ANKRD62	A6NC57	917 aa		7.92	□□□□□ -1.14
HERPUD1-208	ENST00000563911	PRR19	A6NJB7	356 aa		7.92	□□□□□ -1.14
HERPUD1-208	ENST00000563911	WASH4P	A8MWX3	477 aa		7.92	□□□□□ -1.14
HERPUD1-208	ENST00000563911	MMP10	P09238	476 aa		7.92	□□□□□ -1.14
HERPUD1-208	ENST00000563911	FGFR1	P11362	822 aa		7.92	□□□□□ -1.14
HERPUD1-208	ENST00000563911	FOSL1	P15407	271 aa		7.92	□□□□□ -1.14
HERPUD1-208	ENST00000563911	TPP2	P29144	1249 aa	Predicted RBP	7.92	□□□□□ -1.14
HERPUD1-208	ENST00000563911	CTSK	P43235	329 aa		7.92	□□□□□ -1.14
HERPUD1-208	ENST00000563911	AMPH	P49418	695 aa		7.92	□□□□□ -1.14
HERPUD1-208	ENST00000563911	CLCN7	P51798	805 aa		7.92	□□□□□ -1.14
HERPUD1-208	ENST00000563911	TSPYL5	Q86VY4	417 aa	Predicted RBP	7.92	□□□□□ -1.14
HERPUD1-208	ENST00000563911	FLAD1	Q8NFF5	587 aa		7.92	□□□□□ -1.14
HERPUD1-208	ENST00000563911	EXOC2	Q96KP1	924 aa		7.92	□□□□□ -1.14
HERPUD1-208	ENST00000563911	ZC3H7B	Q9UGR2	993 aa	Known RBP	7.92	□□□□□ -1.14
HERPUD1-208	ENST00000563911	ASAP1	Q9ULH1	1129 aa		7.92	□□□□□ -1.14
HERPUD1-208	ENST00000563911	NSD3	Q9BZ95	1437 aa		7.92	□□□□□ -1.14
HERPUD1-208	ENST00000563911	TMEM265	A0A087WTH1	108 aa		7.91	□□□□□ -1.14
HERPUD1-208	ENST00000563911	SSU72P8	A0A1W2PR75	194 aa		7.91	□□□□□ -1.14
HERPUD1-208	ENST00000563911	PPP1R12A	O14974	1030 aa	Predicted RBP	7.91	□□□□□ -1.14
HERPUD1-208	ENST00000563911	FYB1	O15117	783 aa		7.91	□□□□□ -1.14
HERPUD1-208	ENST00000563911	CD3E	P07766	207 aa		7.91	□□□□□ -1.14
HERPUD1-208	ENST00000563911	SNRPB2	P08579	225 aa	Known RBP	7.91	□□□□□ -1.14
HERPUD1-208	ENST00000563911	HOXC12	P31275	282 aa		7.91	□□□□□ -1.14
HERPUD1-208	ENST00000563911	NOP2	P46087	812 aa	Known RBP	7.91	□□□□□ -1.14
HERPUD1-208	ENST00000563911	SF1	Q15637	639 aa	Known RBP	7.91	□□□□□ -1.14
HERPUD1-208	ENST00000563911	THAP5	Q7Z6K1	395 aa		7.91	□□□□□ -1.14
HERPUD1-208	ENST00000563911	SYNPO	Q8N3V7	929 aa		7.91	□□□□□ -1.14
HERPUD1-208	ENST00000563911	TESK2	Q96S53	571 aa		7.91	□□□□□ -1.14
HERPUD1-208	ENST00000563911	NKX2-4	Q9H2Z4	354 aa		7.91	□□□□□ -1.14
HERPUD1-208	ENST00000563911	MRPS23	Q9Y3D9	190 aa	Known RBP	7.91	□□□□□ -1.14
HERPUD1-208	ENST00000563911	SNX11	Q9Y5W9	270 aa		7.91	□□□□□ -1.14
HERPUD1-208	ENST00000563911	KCP	Q6ZWJ8	1503 aa		7.91	□□□□□ -1.14
HERPUD1-208	ENST00000563911	ITGB4	P16144	1822 aa		7.9	□□□□□ -1.14
HERPUD1-208	ENST00000563911	IGHA1	P01876	353 aa		7.9	□□□□□ -1.14
HERPUD1-208	ENST00000563911	CAPNS1	P04632	268 aa		7.9	□□□□□ -1.14
HERPUD1-208	ENST00000563911	FURIN	P09958	794 aa		7.9	□□□□□ -1.14
HERPUD1-208	ENST00000563911	ECI1	P42126	302 aa		7.9	□□□□□ -1.14
HERPUD1-208	ENST00000563911	TKFC	Q3LXA3	575 aa		7.9	□□□□□ -1.14
HERPUD1-208	ENST00000563911	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	7.9	□□□□□ -1.14
HERPUD1-208	ENST00000563911	OSBP2	Q969R2	916 aa		7.9	□□□□□ -1.14
HERPUD1-208	ENST00000563911	CCDC140	Q96MF4	163 aa		7.9	□□□□□ -1.14
HERPUD1-208	ENST00000563911	FEZ1	Q99689	392 aa		7.9	□□□□□ -1.14
HERPUD1-208	ENST00000563911	CYP26B1	Q9NR63	512 aa		7.9	□□□□□ -1.14
HERPUD1-208	ENST00000563911	KIF13B	Q9NQT8	1826 aa		7.89	□□□□□ -1.15
HERPUD1-208	ENST00000563911	C10orf71	Q711Q0	1435 aa		7.89	□□□□□ -1.15
HERPUD1-208	ENST00000563911	STXBP3	O00186	592 aa		7.89	□□□□□ -1.15
HERPUD1-208	ENST00000563911	TGFB1	P01137	390 aa		7.89	□□□□□ -1.15
HERPUD1-208	ENST00000563911	SYP	P08247	313 aa		7.89	□□□□□ -1.15
HERPUD1-208	ENST00000563911	VAV1	P15498	845 aa		7.89	□□□□□ -1.15
HERPUD1-208	ENST00000563911	HOXA10	P31260	410 aa	Predicted RBP	7.89	□□□□□ -1.15
HERPUD1-208	ENST00000563911	BMP8B	P34820	402 aa		7.89	□□□□□ -1.15
HERPUD1-208	ENST00000563911	GYS2	P54840	703 aa		7.89	□□□□□ -1.15
HERPUD1-208	ENST00000563911	PCBP3	P57721	371 aa	Known RBP	7.89	□□□□□ -1.15
HERPUD1-208	ENST00000563911	SUMO1	P63165	101 aa	Known RBP	7.89	□□□□□ -1.15
HERPUD1-208	ENST00000563911	C21orf62-AS1	Q17RA5	79 aa		7.89	□□□□□ -1.15
HERPUD1-208	ENST00000563911	TAF7L	Q5H9L4	462 aa		7.89	□□□□□ -1.15
HERPUD1-208	ENST00000563911	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	7.89	□□□□□ -1.15
HERPUD1-208	ENST00000563911	KCTD13	Q8WZ19	329 aa		7.89	□□□□□ -1.15
HERPUD1-208	ENST00000563911	KISS1R	Q969F8	398 aa	Predicted RBP	7.89	□□□□□ -1.15
HERPUD1-208	ENST00000563911	SEMA6B	Q9H3T3	888 aa		7.89	□□□□□ -1.15
HERPUD1-208	ENST00000563911	SEMA3G	Q9NS98	782 aa		7.89	□□□□□ -1.15
HERPUD1-208	ENST00000563911	DUSP13	Q9UII6	198 aa		7.89	□□□□□ -1.15
HERPUD1-208	ENST00000563911	DLX3	O60479	287 aa		7.88	□□□□□ -1.15
HERPUD1-208	ENST00000563911	CP	P00450	1065 aa		7.88	□□□□□ -1.15
HERPUD1-208	ENST00000563911	GYS1	P13807	737 aa		7.88	□□□□□ -1.15
HERPUD1-208	ENST00000563911	NCL	P19338	710 aa	Known RBP	7.88	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms