RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 INSM1Q01101 510 aaPredicted RBP6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 DNM1Q05193 864 aaKnown RBP6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 PPATQ06203 517 aa6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 PPIL2Q13356 520 aa6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 MOGSQ13724 837 aa6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 DSC3Q14574 896 aa6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 RAB3GAP1Q15042 981 aa6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 KIAA1755Q5JYT7 1200 aa6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 ZNF385CQ66K41 422 aaPredicted RBP6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 RUFY3Q7L099 469 aa6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 RASGRP2Q7LDG7 609 aa6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 IQCA1Q86XH1 822 aa6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 ERO1BQ86YB8 467 aa6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 LRRC47Q8N1G4 583 aaKnown RBP6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 FBXL16Q8N461 479 aa6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 GOLGA6L1Q8N7Z2 621 aa6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 ZSCAN1Q8NBB4 408 aa6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 BHMTQ93088 406 aa6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 MKL1Q969V6 931 aa6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 OPTNQ96CV9 577 aa6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 HHIPL1Q96JK4 782 aa6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 TMEM87BQ96K49 555 aa6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 KANSL2Q9H9L4 492 aa6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 LY9Q9HBG7 655 aa6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 PICK1Q9NRD5 415 aa6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 PRKAG2Q9UGJ0 569 aa6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 POLIQ9UNA4 740 aa6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 TMX2Q9Y320 296 aa6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 AFG3L2Q9Y4W6 797 aa6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 ZHX2Q9Y6X8 837 aa6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 DOCK1Q14185 1865 aa6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 A0A0G2JLL6 359 aaPredicted RBP6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 TRIM75PA6NK02 468 aa6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 CXCL11O14625 94 aa6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 IFIT3O14879 490 aaKnown RBP6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 TTLL1O95922 423 aa6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 SNHG28P0DPA3 235 aa6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 BCRP11274 1271 aa6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 HSPA6P17066 643 aa6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 NFKB1P19838 968 aa6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 LIFRP42702 1097 aa6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 ZNF157P51786 506 aaPredicted RBP6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 AK2P54819 239 aa6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 BACE1P56817 501 aa6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 SPP2Q13103 211 aa6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 TOB2Q14106 344 aaPredicted RBP6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 WTAPQ15007 396 aa6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 RABEP1Q15276 862 aa6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 CCDC178Q5BJE1 867 aa6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 TMEM67Q5HYA8 995 aa6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 RGMBQ6NW40 437 aa6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 Q6ZUG5 572 aa6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 PRRT2Q7Z6L0 340 aaPredicted RBP6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 SGMS1Q86VZ5 419 aa6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 FCHSD1Q86WN1 690 aa6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 DGKHQ86XP1 1220 aa6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 BRI3BPQ8WY22 251 aa6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 RNF34Q969K3 372 aa6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 C12orf42Q96LP6 360 aa6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 PNMA5Q96PV4 448 aa6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 TMEM47Q9BQJ4 181 aa6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 UBAC1Q9BSL1 405 aa6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 KIAA1683Q9H0B3 1180 aa6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 ALDH8A1Q9H2A2 487 aaPredicted RBP6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 PDRG1Q9NUG6 133 aa6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 ZFATQ9P243 1243 aa6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 CLIP2Q9UDT6 1046 aa6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 ABT1Q9ULW3 272 aaKnown RBP6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 SYNPO2Q9UMS6 1093 aa6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 STX8Q9UNK0 236 aa6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 FNDC3AQ9Y2H6 1198 aaKnown RBP6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 CYP46A1Q9Y6A2 500 aa6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 PCNTO95613 3336 aa6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 TRPM7Q96QT4 1865 aa6.07□□□□□ -1.44
HERPUD1-207ENST00000563781 OIP5O43482 229 aa6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 ARHGEF15O94989 841 aa6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 MAP3K6O95382 1288 aa6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 NDUFB10O96000 172 aa6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 RPLP1P05386 114 aaKnown RBP6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 ZBTB48P10074 688 aaPredicted RBP6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 TOP1P11387 765 aaKnown RBP6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 ATP2B1P20020 1258 aa6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 NEK4P51957 841 aa6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 HMGCS2P54868 508 aa6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 EVCP57679 992 aa6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 DAB2P98082 770 aa6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 ATP2B2Q01814 1243 aa6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 RBL2Q08999 1139 aa6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 APOBRQ0VD83 1088 aa6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 TROAPQ12815 778 aa6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 ZYXQ15942 572 aaKnown RBP6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 SLC35G1Q2M3R5 365 aa6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 IFIT1BQ5T764 474 aaKnown RBP6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 CYP4F22Q6NT55 531 aa6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 GPAT2Q6NUI2 795 aa6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 APOA5Q6Q788 366 aa6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 XKR5Q6UX68 686 aa6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 SLCO4C1Q6ZQN7 724 aa6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 KRT25Q7Z3Z0 450 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms