RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 MAP4P27816 1152 aaKnown RBP6.75□□□□□ -1.33
CLK3-212ENST00000563418 EHHADHQ08426 723 aa6.75□□□□□ -1.33
CLK3-212ENST00000563418 CBX3Q13185 183 aa6.75□□□□□ -1.33
CLK3-212ENST00000563418 SV2BQ7L1I2 683 aa6.75□□□□□ -1.33
CLK3-212ENST00000563418 LSG1Q9H089 658 aaKnown RBP6.75□□□□□ -1.33
CLK3-212ENST00000563418 ALDH8A1Q9H2A2 487 aaPredicted RBP6.75□□□□□ -1.33
CLK3-212ENST00000563418 MRPL46Q9H2W6 279 aaKnown RBP6.75□□□□□ -1.33
CLK3-212ENST00000563418 DDX28Q9NUL7 540 aaKnown RBP6.75□□□□□ -1.33
CLK3-212ENST00000563418 SESN1Q9Y6P5 492 aa6.75□□□□□ -1.33
CLK3-212ENST00000563418 PRDM15P57071 1507 aaPredicted RBP6.75□□□□□ -1.33
CLK3-212ENST00000563418 CAPN1P07384 714 aa6.75□□□□□ -1.33
CLK3-212ENST00000563418 TMC5Q6UXY8 1006 aa6.75□□□□□ -1.33
CLK3-212ENST00000563418 PPP2R3CQ969Q6 453 aa6.75□□□□□ -1.33
CLK3-212ENST00000563418 OLFML3Q9NRN5 406 aa6.75□□□□□ -1.33
CLK3-212ENST00000563418 C6orf203Q9P0P8 240 aaPredicted RBP6.75□□□□□ -1.33
CLK3-212ENST00000563418 DDX20Q9UHI6 824 aaKnown RBP6.75□□□□□ -1.33
CLK3-212ENST00000563418 ORC6Q9Y5N6 252 aa6.75□□□□□ -1.33
CLK3-212ENST00000563418 SYNJ2O15056 1496 aa6.75□□□□□ -1.33
CLK3-212ENST00000563418 ELF3P78545 371 aaPredicted RBP6.75□□□□□ -1.33
CLK3-212ENST00000563418 LINC00301Q8NCQ3 95 aa6.75□□□□□ -1.33
CLK3-212ENST00000563418 SPATA4Q8NEY3 305 aa6.75□□□□□ -1.33
CLK3-212ENST00000563418 DHTKD1Q96HY7 919 aaPredicted RBP6.75□□□□□ -1.33
CLK3-212ENST00000563418 NDNQ99608 321 aa6.75□□□□□ -1.33
CLK3-212ENST00000563418 AIPL1Q9NZN9 384 aa6.75□□□□□ -1.33
CLK3-212ENST00000563418 CCPG1Q9ULG6 757 aa6.75□□□□□ -1.33
CLK3-212ENST00000563418 SMG5Q9UPR3 1016 aaKnown RBP6.75□□□□□ -1.33
CLK3-212ENST00000563418 SYNGAP1Q96PV0 1343 aa6.75□□□□□ -1.33
CLK3-212ENST00000563418 RAPGEF3O95398 923 aa6.75□□□□□ -1.33
CLK3-212ENST00000563418 PDAP1Q13442 181 aaKnown RBP6.75□□□□□ -1.33
CLK3-212ENST00000563418 ITGA9Q13797 1035 aa6.75□□□□□ -1.33
CLK3-212ENST00000563418 PNKPQ96T60 521 aa6.75□□□□□ -1.33
CLK3-212ENST00000563418 TRIM56Q9BRZ2 755 aaKnown RBP6.75□□□□□ -1.33
CLK3-212ENST00000563418 UPF3AQ9H1J1 476 aaKnown RBP6.75□□□□□ -1.33
CLK3-212ENST00000563418 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.75□□□□□ -1.33
CLK3-212ENST00000563418 MRGBPQ9NV56 204 aa6.75□□□□□ -1.33
CLK3-212ENST00000563418 RESTQ13127 1097 aa6.75□□□□□ -1.33
CLK3-212ENST00000563418 ANKRD23Q86SG2 305 aa6.75□□□□□ -1.33
CLK3-212ENST00000563418 PAWRQ96IZ0 340 aaKnown RBP6.75□□□□□ -1.33
CLK3-212ENST00000563418 ZKSCAN3Q9BRR0 538 aa6.75□□□□□ -1.33
CLK3-212ENST00000563418 RPAP3Q9H6T3 665 aaPredicted RBP6.75□□□□□ -1.33
CLK3-212ENST00000563418 METTL14Q9HCE5 456 aaKnown RBP6.75□□□□□ -1.33
CLK3-212ENST00000563418 RWDD3Q9Y3V2 267 aa6.75□□□□□ -1.33
CLK3-212ENST00000563418 ITGB3BPQ13352 177 aaPredicted RBP6.75□□□□□ -1.33
CLK3-212ENST00000563418 EXOC8Q8IYI6 725 aa6.75□□□□□ -1.33
CLK3-212ENST00000563418 OTUD7AQ8TE49 926 aaPredicted RBP6.75□□□□□ -1.33
CLK3-212ENST00000563418 RXFP1Q9HBX9 757 aa6.75□□□□□ -1.33
CLK3-212ENST00000563418 ANGEL1Q9UNK9 670 aaKnown RBP6.75□□□□□ -1.33
CLK3-212ENST00000563418 PCDHA13Q9Y5I0 950 aa6.75□□□□□ -1.33
CLK3-212ENST00000563418 NOSTRINQ8IVI9 506 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 DSCC1Q9BVC3 393 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 DPH5Q9H2P9 285 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 ABCC12Q96J65 1359 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 PTPRGP23470 1445 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 ASXL2Q76L83 1435 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 TRIM16O95361 564 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 KIF23Q02241 960 aaPredicted RBP6.74□□□□□ -1.33
CLK3-212ENST00000563418 KAZNQ674X7 775 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 FAM25AB3EWG3 89 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 FAM25CB3EWG5 89 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 FAM25GB3EWG6 89 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 F6X3S4 739 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 ECEL1O95672 775 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 ADCY8P40145 1251 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 INPP1P49441 399 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 HIC1Q14526 733 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 UAP1Q16222 522 aaPredicted RBP6.74□□□□□ -1.33
CLK3-212ENST00000563418 EPM2AIP1Q7L775 607 aaPredicted RBP6.74□□□□□ -1.33
CLK3-212ENST00000563418 PPWD1Q96BP3 646 aaKnown RBP6.74□□□□□ -1.33
CLK3-212ENST00000563418 LZTS2Q9BRK4 669 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 CALUO43852 315 aaPredicted RBP6.74□□□□□ -1.33
CLK3-212ENST00000563418 CLPTM1O96005 669 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 POTEIP0CG38 1075 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 RAB27AP51159 221 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 XRCC4Q13426 336 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 TSPYL6Q8N831 410 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 CCDC8Q9H0W5 538 aaPredicted RBP6.74□□□□□ -1.33
CLK3-212ENST00000563418 ANKZF1Q9H8Y5 726 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 SNX12Q9UMY4 172 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 TTC37Q6PGP7 1564 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 MRPS9P82933 396 aaKnown RBP6.74□□□□□ -1.33
CLK3-212ENST00000563418 SLC7A5Q01650 507 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 C11orf91Q3C1V1 193 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 CADPS2Q86UW7 1296 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 CRACR2BQ8N4Y2 399 aaPredicted RBP6.74□□□□□ -1.33
CLK3-212ENST00000563418 STK32AQ8WU08 396 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 ZNF184Q99676 751 aaPredicted RBP6.74□□□□□ -1.33
CLK3-212ENST00000563418 HBS1LQ9Y450 684 aaKnown RBP6.74□□□□□ -1.33
CLK3-212ENST00000563418 MBD5Q9P267 1494 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 A0A1W2PQC6 194 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 OCM2P0CE71 109 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 OCMP0CE72 109 aaPredicted RBP6.74□□□□□ -1.33
CLK3-212ENST00000563418 CHN1P15882 459 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 TNFAIP3P21580 790 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 DHX34Q14147 1143 aaKnown RBP6.74□□□□□ -1.33
CLK3-212ENST00000563418 FSCBQ5H9T9 825 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 ZNF280DQ6N043 979 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 GABPB2Q8TAK5 448 aaPredicted RBP6.74□□□□□ -1.33
CLK3-212ENST00000563418 ESR2Q92731 530 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 VTI1AQ96AJ9 217 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 CYTH2Q99418 400 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms