RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 IGFLR1Q9H665 355 aa9.13□□□□□ -0.95
HERPUD1-206ENST00000563343 ADGRA3Q8IWK6 1321 aa9.12□□□□□ -0.95
HERPUD1-206ENST00000563343 WDR19Q8NEZ3 1342 aa9.12□□□□□ -0.95
HERPUD1-206ENST00000563343 KRT37O76014 449 aa9.12□□□□□ -0.95
HERPUD1-206ENST00000563343 THPOP40225 353 aa9.12□□□□□ -0.95
HERPUD1-206ENST00000563343 TDO2P48775 406 aa9.12□□□□□ -0.95
HERPUD1-206ENST00000563343 NDUFV1P49821 464 aa9.12□□□□□ -0.95
HERPUD1-206ENST00000563343 PTPN21Q16825 1174 aa9.12□□□□□ -0.95
HERPUD1-206ENST00000563343 CHST3Q7LGC8 479 aa9.12□□□□□ -0.95
HERPUD1-206ENST00000563343 FIBCD1Q8N539 461 aa9.12□□□□□ -0.95
HERPUD1-206ENST00000563343 EFHBQ8N7U6 833 aa9.12□□□□□ -0.95
HERPUD1-206ENST00000563343 KBTBD3Q8NAB2 608 aa9.12□□□□□ -0.95
HERPUD1-206ENST00000563343 DCAF4Q8WV16 495 aa9.12□□□□□ -0.95
HERPUD1-206ENST00000563343 SUSD6Q92537 303 aa9.12□□□□□ -0.95
HERPUD1-206ENST00000563343 SEPT8Q92599 483 aa9.12□□□□□ -0.95
HERPUD1-206ENST00000563343 ZNF689Q96CS4 500 aaPredicted RBP9.12□□□□□ -0.95
HERPUD1-206ENST00000563343 IL17RAQ96F46 866 aa9.12□□□□□ -0.95
HERPUD1-206ENST00000563343 RIPOR3Q96MK2 946 aa9.12□□□□□ -0.95
HERPUD1-206ENST00000563343 PHF12Q96QT6 1004 aa9.12□□□□□ -0.95
HERPUD1-206ENST00000563343 MPHOSPH6Q99547 160 aaKnown RBP9.12□□□□□ -0.95
HERPUD1-206ENST00000563343 PHF7Q9BWX1 381 aaPredicted RBP9.12□□□□□ -0.95
HERPUD1-206ENST00000563343 IFIH1Q9BYX4 1025 aaKnown RBP9.12□□□□□ -0.95
HERPUD1-206ENST00000563343 INCENPQ9NQS7 918 aa9.12□□□□□ -0.95
HERPUD1-206ENST00000563343 COL20A1Q9P218 1284 aa9.12□□□□□ -0.95
HERPUD1-206ENST00000563343 DDX41Q9UJV9 622 aaKnown RBP9.12□□□□□ -0.95
HERPUD1-206ENST00000563343 STX8Q9UNK0 236 aa9.12□□□□□ -0.95
HERPUD1-206ENST00000563343 USP15Q9Y4E8 981 aaPredicted RBP9.12□□□□□ -0.95
HERPUD1-206ENST00000563343 DENND4AQ7Z401 1863 aa9.11□□□□□ -0.95
HERPUD1-206ENST00000563343 PATL2C9JE40 543 aaKnown RBP9.11□□□□□ -0.95
HERPUD1-206ENST00000563343 FOXP2O15409 715 aa9.11□□□□□ -0.95
HERPUD1-206ENST00000563343 GNAT2P19087 354 aa9.11□□□□□ -0.95
HERPUD1-206ENST00000563343 PPARAQ07869 468 aa9.11□□□□□ -0.95
HERPUD1-206ENST00000563343 SEPT14Q6ZU15 432 aa9.11□□□□□ -0.95
HERPUD1-206ENST00000563343 TMEM105Q8N8V8 129 aa9.11□□□□□ -0.95
HERPUD1-206ENST00000563343 RGS22Q8NE09 1264 aa9.11□□□□□ -0.95
HERPUD1-206ENST00000563343 PPTC7Q8NI37 304 aa9.11□□□□□ -0.95
HERPUD1-206ENST00000563343 TBC1D5Q92609 795 aa9.11□□□□□ -0.95
HERPUD1-206ENST00000563343 TAAR1Q96RJ0 339 aa9.11□□□□□ -0.95
HERPUD1-206ENST00000563343 C16orf70Q9BSU1 422 aa9.11□□□□□ -0.95
HERPUD1-206ENST00000563343 PLAGL2Q9UPG8 496 aa9.11□□□□□ -0.95
HERPUD1-206ENST00000563343 MTMR7Q9Y216 660 aa9.11□□□□□ -0.95
HERPUD1-206ENST00000563343 RWDD3Q9Y3V2 267 aa9.11□□□□□ -0.95
HERPUD1-206ENST00000563343 ZFHX4Q86UP3 3567 aa9.11□□□□□ -0.95
HERPUD1-206ENST00000563343 NCOR2Q9Y618 2525 aa9.1□□□□□ -0.95
HERPUD1-206ENST00000563343 FRMPD2Q68DX3 1309 aaPredicted RBP9.1□□□□□ -0.95
HERPUD1-206ENST00000563343 ZNF316A6NFI3 1004 aaPredicted RBP9.1□□□□□ -0.95
HERPUD1-206ENST00000563343 TREHO43280 583 aa9.1□□□□□ -0.95
HERPUD1-206ENST00000563343 RAB11FIP3O75154 756 aa9.1□□□□□ -0.95
HERPUD1-206ENST00000563343 ATF7P17544 494 aaPredicted RBP9.1□□□□□ -0.95
HERPUD1-206ENST00000563343 CCDC96Q2M329 555 aa9.1□□□□□ -0.95
HERPUD1-206ENST00000563343 HSDL1Q3SXM5 330 aa9.1□□□□□ -0.95
HERPUD1-206ENST00000563343 FAM26DQ5JW98 314 aa9.1□□□□□ -0.95
HERPUD1-206ENST00000563343 FRMD5Q7Z6J6 570 aa9.1□□□□□ -0.95
HERPUD1-206ENST00000563343 ADSSL1Q8N142 457 aa9.1□□□□□ -0.95
HERPUD1-206ENST00000563343 SPPL3Q8TCT6 385 aa9.1□□□□□ -0.95
HERPUD1-206ENST00000563343 SYTL5Q8TDW5 730 aaPredicted RBP9.1□□□□□ -0.95
HERPUD1-206ENST00000563343 ATP8B4Q8TF62 1192 aa9.1□□□□□ -0.95
HERPUD1-206ENST00000563343 P2RX5Q93086 422 aa9.1□□□□□ -0.95
HERPUD1-206ENST00000563343 RPGRIP1Q96KN7 1286 aa9.1□□□□□ -0.95
HERPUD1-206ENST00000563343 PLVAPQ9BX97 442 aa9.1□□□□□ -0.95
HERPUD1-206ENST00000563343 BARX2Q9UMQ3 279 aaPredicted RBP9.1□□□□□ -0.95
HERPUD1-206ENST00000563343 TSPY2A6NKD2 308 aa9.09□□□□□ -0.95
HERPUD1-206ENST00000563343 B4DLN1 442 aa9.09□□□□□ -0.95
HERPUD1-206ENST00000563343 RNF113AO15541 343 aaKnown RBP9.09□□□□□ -0.95
HERPUD1-206ENST00000563343 CAND2O75155 1236 aa9.09□□□□□ -0.95
HERPUD1-206ENST00000563343 KDM4AO75164 1064 aa9.09□□□□□ -0.95
HERPUD1-206ENST00000563343 PPFIA4O75335 1185 aa9.09□□□□□ -0.95
HERPUD1-206ENST00000563343 GABBR2O75899 941 aa9.09□□□□□ -0.95
HERPUD1-206ENST00000563343 CSPG5O95196 566 aa9.09□□□□□ -0.95
HERPUD1-206ENST00000563343 ITGB1P05556 798 aa9.09□□□□□ -0.95
HERPUD1-206ENST00000563343 SNHG28P0DPA3 235 aa9.09□□□□□ -0.95
HERPUD1-206ENST00000563343 PDHBP11177 359 aa9.09□□□□□ -0.95
HERPUD1-206ENST00000563343 MRPL12P52815 198 aaKnown RBP9.09□□□□□ -0.95
HERPUD1-206ENST00000563343 RBM10P98175 930 aaKnown RBP9.09□□□□□ -0.95
HERPUD1-206ENST00000563343 LAMC2Q13753 1193 aa9.09□□□□□ -0.95
HERPUD1-206ENST00000563343 PPP4R3BQ5MIZ7 849 aa9.09□□□□□ -0.95
HERPUD1-206ENST00000563343 MYSM1Q5VVJ2 828 aa9.09□□□□□ -0.95
HERPUD1-206ENST00000563343 DHX37Q8IY37 1157 aaKnown RBP9.09□□□□□ -0.95
HERPUD1-206ENST00000563343 FTSJ3Q8IY81 847 aaKnown RBP9.09□□□□□ -0.95
HERPUD1-206ENST00000563343 CRIPAKQ8N1N5 446 aa9.09□□□□□ -0.95
HERPUD1-206ENST00000563343 VN1R2Q8NFZ6 395 aa9.09□□□□□ -0.95
HERPUD1-206ENST00000563343 APBB2Q92870 758 aa9.09□□□□□ -0.95
HERPUD1-206ENST00000563343 SEC62Q99442 399 aaKnown RBP9.09□□□□□ -0.95
HERPUD1-206ENST00000563343 BCL11AQ9H165 835 aa9.09□□□□□ -0.95
HERPUD1-206ENST00000563343 GPCPD1Q9NPB8 672 aa9.09□□□□□ -0.95
HERPUD1-206ENST00000563343 PNMA2Q9UL42 364 aa9.09□□□□□ -0.95
HERPUD1-206ENST00000563343 CIZ1Q9ULV3 898 aaPredicted RBP9.09□□□□□ -0.95
HERPUD1-206ENST00000563343 PCDHGC5Q9Y5F6 944 aa9.09□□□□□ -0.95
HERPUD1-206ENST00000563343 EP300Q09472 2414 aaPredicted RBP9.09□□□□□ -0.96
HERPUD1-206ENST00000563343 CEP250Q9BV73 2442 aa9.08□□□□□ -0.96
HERPUD1-206ENST00000563343 C17orf102A2RUQ5 167 aa9.08□□□□□ -0.96
HERPUD1-206ENST00000563343 DGKIO75912 1065 aa9.08□□□□□ -0.96
HERPUD1-206ENST00000563343 APPP05067 770 aa9.08□□□□□ -0.96
HERPUD1-206ENST00000563343 CTSHP09668 335 aa9.08□□□□□ -0.96
HERPUD1-206ENST00000563343 FGRP09769 529 aa9.08□□□□□ -0.96
HERPUD1-206ENST00000563343 NRIP1P48552 1158 aa9.08□□□□□ -0.96
HERPUD1-206ENST00000563343 ADAM17P78536 824 aa9.08□□□□□ -0.96
HERPUD1-206ENST00000563343 SP2Q02086 613 aa9.08□□□□□ -0.96
HERPUD1-206ENST00000563343 KCNC3Q14003 757 aa9.08□□□□□ -0.96
HERPUD1-206ENST00000563343 STXBP2Q15833 593 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms