RNA–Protein interactions for RNA: ENST00000563128.5

EPB42-204, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 3

Gene EPB42, Length 593 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-204ENST00000563128 TDP2O95551 362 aa13.18□□□□□ -0.3
EPB42-204ENST00000563128 ITGB3BPQ13352 177 aaPredicted RBP13.18□□□□□ -0.3
EPB42-204ENST00000563128 LETM2Q2VYF4 491 aa13.18□□□□□ -0.3
EPB42-204ENST00000563128 TRMT1LQ7Z2T5 733 aaKnown RBP13.18□□□□□ -0.3
EPB42-204ENST00000563128 PPTC7Q8NI37 304 aa13.18□□□□□ -0.3
EPB42-204ENST00000563128 KAT2BQ92831 832 aa13.18□□□□□ -0.3
EPB42-204ENST00000563128 TRIM43Q96BQ3 446 aaPredicted RBP13.18□□□□□ -0.3
EPB42-204ENST00000563128 GPR20Q99678 358 aa13.18□□□□□ -0.3
EPB42-204ENST00000563128 TRMT13Q9NUP7 481 aaKnown RBP13.18□□□□□ -0.3
EPB42-204ENST00000563128 TMEM39AQ9NV64 488 aa13.18□□□□□ -0.3
EPB42-204ENST00000563128 ELP1O95163 1332 aa13.17□□□□□ -0.3
EPB42-204ENST00000563128 LRRC37A2A6NM11 1700 aa13.17□□□□□ -0.3
EPB42-204ENST00000563128 DCDC2CA8MYV0 355 aa13.17□□□□□ -0.3
EPB42-204ENST00000563128 CYP2C9P11712 490 aa13.17□□□□□ -0.3
EPB42-204ENST00000563128 ITGB8P26012 769 aa13.17□□□□□ -0.3
EPB42-204ENST00000563128 MARK3P27448 753 aa13.17□□□□□ -0.3
EPB42-204ENST00000563128 KRT2P35908 639 aa13.17□□□□□ -0.3
EPB42-204ENST00000563128 PSEN2P49810 448 aa13.17□□□□□ -0.3
EPB42-204ENST00000563128 CDK7P50613 346 aa13.17□□□□□ -0.3
EPB42-204ENST00000563128 ZNF200P98182 395 aaPredicted RBP13.17□□□□□ -0.3
EPB42-204ENST00000563128 FAAP100Q0VG06 881 aa13.17□□□□□ -0.3
EPB42-204ENST00000563128 NONOQ15233 471 aaKnown RBP eCLIP13.17□□□□□ -0.3
EPB42-204ENST00000563128 METTL7BQ6UX53 244 aa13.17□□□□□ -0.3
EPB42-204ENST00000563128 CHRDL2Q6WN34 429 aa13.17□□□□□ -0.3
EPB42-204ENST00000563128 DIS3L2Q8IYB7 885 aaKnown RBP13.17□□□□□ -0.3
EPB42-204ENST00000563128 C8orf76Q96K31 380 aa13.17□□□□□ -0.3
EPB42-204ENST00000563128 SDF4Q9BRK5 362 aa13.17□□□□□ -0.3
EPB42-204ENST00000563128 PPP1R12CQ9BZL4 782 aa13.17□□□□□ -0.3
EPB42-204ENST00000563128 PRKAG2Q9UGJ0 569 aa13.17□□□□□ -0.3
EPB42-204ENST00000563128 GSTTP1A0A1W2PQM5 241 aa13.16□□□□□ -0.3
EPB42-204ENST00000563128 B4GALT4O60513 344 aa13.16□□□□□ -0.3
EPB42-204ENST00000563128 KPNA6O60684 536 aa13.16□□□□□ -0.3
EPB42-204ENST00000563128 CABYRO75952 493 aa13.16□□□□□ -0.3
EPB42-204ENST00000563128 CYP3A4P08684 503 aa13.16□□□□□ -0.3
EPB42-204ENST00000563128 CLTBP09497 229 aa13.16□□□□□ -0.3
EPB42-204ENST00000563128 TCF7P36402 384 aaPredicted RBP13.16□□□□□ -0.3
EPB42-204ENST00000563128 MFSD10Q14728 455 aa13.16□□□□□ -0.3
EPB42-204ENST00000563128 SNX17Q15036 470 aa13.16□□□□□ -0.3
EPB42-204ENST00000563128 KIAA0753Q2KHM9 967 aa13.16□□□□□ -0.3
EPB42-204ENST00000563128 KRT25Q7Z3Z0 450 aa13.16□□□□□ -0.3
EPB42-204ENST00000563128 DAGLBQ8NCG7 672 aa13.16□□□□□ -0.3
EPB42-204ENST00000563128 CRYGNQ8WXF5 182 aa13.16□□□□□ -0.3
EPB42-204ENST00000563128 BADQ92934 168 aa13.16□□□□□ -0.3
EPB42-204ENST00000563128 EMID1Q96A84 441 aaPredicted RBP13.16□□□□□ -0.3
EPB42-204ENST00000563128 CDHR1Q96JP9 859 aa13.16□□□□□ -0.3
EPB42-204ENST00000563128 LLPHQ9BRT6 129 aaKnown RBP13.16□□□□□ -0.3
EPB42-204ENST00000563128 ZNF577Q9BSK1 485 aa13.16□□□□□ -0.3
EPB42-204ENST00000563128 PDLIM7Q9NR12 457 aa13.16□□□□□ -0.3
EPB42-204ENST00000563128 HDAC6Q9UBN7 1215 aa13.16□□□□□ -0.3
EPB42-204ENST00000563128 TNRC18O15417 2968 aaPredicted RBP13.16□□□□□ -0.3
EPB42-204ENST00000563128 FRMPD3Q5JV73 1810 aa13.16□□□□□ -0.3
EPB42-204ENST00000563128 IGLV3-22A0A075B6J6 115 aa13.15□□□□□ -0.3
EPB42-204ENST00000563128 CHMP2AO43633 222 aa13.15□□□□□ -0.3
EPB42-204ENST00000563128 CCNT1O60563 726 aaKnown RBP13.15□□□□□ -0.3
EPB42-204ENST00000563128 PPFIA4O75335 1185 aa13.15□□□□□ -0.3
EPB42-204ENST00000563128 MMP1P03956 469 aa13.15□□□□□ -0.3
EPB42-204ENST00000563128 LGALS2P05162 132 aa13.15□□□□□ -0.3
EPB42-204ENST00000563128 GJB2P29033 226 aa13.15□□□□□ -0.3
EPB42-204ENST00000563128 MAGEA10P43363 369 aaPredicted RBP13.15□□□□□ -0.3
EPB42-204ENST00000563128 HIC1Q14526 733 aa13.15□□□□□ -0.3
EPB42-204ENST00000563128 PRPF38BQ5VTL8 546 aaKnown RBP13.15□□□□□ -0.3
EPB42-204ENST00000563128 MCTP2Q6DN12 878 aa13.15□□□□□ -0.3
EPB42-204ENST00000563128 GALNT17Q6IS24 598 aa13.15□□□□□ -0.3
EPB42-204ENST00000563128 FAM126BQ8IXS8 530 aa13.15□□□□□ -0.3
EPB42-204ENST00000563128 SEPT1Q8WYJ6 367 aa13.15□□□□□ -0.3
EPB42-204ENST00000563128 GLG1Q92896 1179 aa13.15□□□□□ -0.3
EPB42-204ENST00000563128 SENP7Q9BQF6 1050 aa13.15□□□□□ -0.3
EPB42-204ENST00000563128 C16orf70Q9BSU1 422 aa13.15□□□□□ -0.3
EPB42-204ENST00000563128 BRMS1Q9HCU9 246 aa13.15□□□□□ -0.3
EPB42-204ENST00000563128 JPH1Q9HDC5 661 aaPredicted RBP13.15□□□□□ -0.3
EPB42-204ENST00000563128 SLC9A2Q9UBY0 812 aa13.15□□□□□ -0.3
EPB42-204ENST00000563128 COLQQ9Y215 455 aaPredicted RBP13.15□□□□□ -0.3
EPB42-204ENST00000563128 PDE4DIPQ5VU43 2346 aa13.14□□□□□ -0.31
EPB42-204ENST00000563128 UMODL1Q5DID0 1318 aa13.14□□□□□ -0.31
EPB42-204ENST00000563128 H3BRB1 525 aa13.14□□□□□ -0.31
EPB42-204ENST00000563128 IPO5O00410 1097 aaKnown RBP13.14□□□□□ -0.31
EPB42-204ENST00000563128 WNT7AO00755 349 aa13.14□□□□□ -0.31
EPB42-204ENST00000563128 MSH4O15457 936 aa13.14□□□□□ -0.31
EPB42-204ENST00000563128 SLC37A4O43826 429 aa13.14□□□□□ -0.31
EPB42-204ENST00000563128 CCNE2O96020 404 aa13.14□□□□□ -0.31
EPB42-204ENST00000563128 RAG1P15918 1043 aa13.14□□□□□ -0.31
EPB42-204ENST00000563128 CYP2C18P33260 490 aa13.14□□□□□ -0.31
EPB42-204ENST00000563128 MCM2P49736 904 aa13.14□□□□□ -0.31
EPB42-204ENST00000563128 USP11P51784 963 aa13.14□□□□□ -0.31
EPB42-204ENST00000563128 CCL23P55773 120 aa13.14□□□□□ -0.31
EPB42-204ENST00000563128 ACTR2P61160 394 aa13.14□□□□□ -0.31
EPB42-204ENST00000563128 HMGN5P82970 282 aaKnown RBP13.14□□□□□ -0.31
EPB42-204ENST00000563128 MCTP1Q6DN14 999 aa13.14□□□□□ -0.31
EPB42-204ENST00000563128 GDF6Q6KF10 455 aaPredicted RBP13.14□□□□□ -0.31
EPB42-204ENST00000563128 ANKRD33Q7Z3H0 272 aa13.14□□□□□ -0.31
EPB42-204ENST00000563128 C7orf31Q8N865 590 aa13.14□□□□□ -0.31
EPB42-204ENST00000563128 SLC43A3Q8NBI5 491 aa13.14□□□□□ -0.31
EPB42-204ENST00000563128 SPRYD3Q8NCJ5 442 aa13.14□□□□□ -0.31
EPB42-204ENST00000563128 ZBTB10Q96DT7 871 aa13.14□□□□□ -0.31
EPB42-204ENST00000563128 LBHD1Q9BQE6 289 aaPredicted RBP13.14□□□□□ -0.31
EPB42-204ENST00000563128 RNPEPQ9H4A4 650 aa13.14□□□□□ -0.31
EPB42-204ENST00000563128 TUT1Q9H6E5 874 aaKnown RBP13.14□□□□□ -0.31
EPB42-204ENST00000563128 DDX25Q9UHL0 483 aaKnown RBP13.14□□□□□ -0.31
EPB42-204ENST00000563128 SMC3Q9UQE7 1217 aa13.14□□□□□ -0.31
EPB42-204ENST00000563128 NOD1Q9Y239 953 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms