RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 DIXDC1Q155Q3 683 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 ANO7Q6IWH7 933 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 GALNT7Q86SF2 657 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 ZGPATQ8N5A5 531 aaKnown RBP10.23□□□□□ -0.77
CDH1-205ENST00000562836 MDM1Q8TC05 714 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 STK32AQ8WU08 396 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 BCL2L13Q9BXK5 485 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 TRPC7Q9HCX4 862 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 ABCB6Q9NP58 842 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 CYLDQ9NQC7 956 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 CNGB3Q9NQW8 809 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 TDRKHQ9Y2W6 561 aaKnown RBP10.23□□□□□ -0.77
CDH1-205ENST00000562836 TARBP1Q13395 1621 aaKnown RBP10.22□□□□□ -0.77
CDH1-205ENST00000562836 MAGEA13PA6NCF6 341 aa10.22□□□□□ -0.77
CDH1-205ENST00000562836 MAP3K6O95382 1288 aa10.22□□□□□ -0.77
CDH1-205ENST00000562836 SYF2O95926 243 aaKnown RBP10.22□□□□□ -0.77
CDH1-205ENST00000562836 PDHA1P08559 390 aa10.22□□□□□ -0.77
CDH1-205ENST00000562836 CHRNB1P11230 501 aa10.22□□□□□ -0.77
CDH1-205ENST00000562836 PTPN5P54829 565 aa10.22□□□□□ -0.77
CDH1-205ENST00000562836 HABP4Q5JVS0 413 aaKnown RBP10.22□□□□□ -0.77
CDH1-205ENST00000562836 DEPDC1Q5TB30 811 aa10.22□□□□□ -0.77
CDH1-205ENST00000562836 CAND1Q86VP6 1230 aaKnown RBP10.22□□□□□ -0.77
CDH1-205ENST00000562836 CYP4X1Q8N118 509 aa10.22□□□□□ -0.77
CDH1-205ENST00000562836 HNRNPLLQ8WVV9 542 aaKnown RBP10.22□□□□□ -0.77
CDH1-205ENST00000562836 C8orf4Q9NR00 106 aa10.22□□□□□ -0.77
CDH1-205ENST00000562836 MTRF1LQ9UGC7 380 aaKnown RBP10.22□□□□□ -0.77
CDH1-205ENST00000562836 EDARQ9UNE0 448 aa10.22□□□□□ -0.77
CDH1-205ENST00000562836 MRC2Q9UBG0 1479 aa10.22□□□□□ -0.77
CDH1-205ENST00000562836 TLDC2A0PJX2 215 aa10.22□□□□□ -0.77
CDH1-205ENST00000562836 RTCAO00442 366 aaKnown RBP10.22□□□□□ -0.77
CDH1-205ENST00000562836 SPATA31D3P0C874 917 aa10.22□□□□□ -0.77
CDH1-205ENST00000562836 LSP1P33241 339 aa10.22□□□□□ -0.77
CDH1-205ENST00000562836 TMED10P49755 219 aaKnown RBP10.22□□□□□ -0.77
CDH1-205ENST00000562836 MRPS35P82673 323 aaKnown RBP10.22□□□□□ -0.77
CDH1-205ENST00000562836 FAPQ12884 760 aa10.22□□□□□ -0.77
CDH1-205ENST00000562836 KIF22Q14807 665 aa10.22□□□□□ -0.77
CDH1-205ENST00000562836 C21orf62-AS1Q17RA5 79 aa10.22□□□□□ -0.77
CDH1-205ENST00000562836 TRIM71Q2Q1W2 868 aaKnown RBP10.22□□□□□ -0.77
CDH1-205ENST00000562836 BRDTQ58F21 947 aaPredicted RBP10.22□□□□□ -0.77
CDH1-205ENST00000562836 SNX30Q5VWJ9 437 aa10.22□□□□□ -0.77
CDH1-205ENST00000562836 TMEM154Q6P9G4 183 aa10.22□□□□□ -0.77
CDH1-205ENST00000562836 CRELD2Q6UXH1 353 aaPredicted RBP10.22□□□□□ -0.77
CDH1-205ENST00000562836 SPATA31D4Q6ZUB0 917 aa10.22□□□□□ -0.77
CDH1-205ENST00000562836 RSRC2Q7L4I2 434 aaKnown RBP10.22□□□□□ -0.77
CDH1-205ENST00000562836 LSMEM1Q8N8F7 131 aa10.22□□□□□ -0.77
CDH1-205ENST00000562836 PPP1R13BQ96KQ4 1090 aa10.22□□□□□ -0.77
CDH1-205ENST00000562836 TTC25Q96NG3 672 aa10.22□□□□□ -0.77
CDH1-205ENST00000562836 SMC6Q96SB8 1091 aa10.22□□□□□ -0.77
CDH1-205ENST00000562836 TMEM206Q9H813 350 aa10.22□□□□□ -0.77
CDH1-205ENST00000562836 ACTR5Q9H9F9 607 aaPredicted RBP10.22□□□□□ -0.77
CDH1-205ENST00000562836 SH3GLB2Q9NR46 395 aa10.22□□□□□ -0.77
CDH1-205ENST00000562836 ETNK2Q9NVF9 386 aa10.22□□□□□ -0.77
CDH1-205ENST00000562836 IL1RAPL1Q9NZN1 696 aa10.22□□□□□ -0.77
CDH1-205ENST00000562836 CTNNAL1Q9UBT7 734 aa10.22□□□□□ -0.77
CDH1-205ENST00000562836 PCDHB6Q9Y5E3 794 aa10.22□□□□□ -0.77
CDH1-205ENST00000562836 GRIN2DO15399 1336 aa10.22□□□□□ -0.77
CDH1-205ENST00000562836 STMND1H3BQB6 276 aa10.21□□□□□ -0.77
CDH1-205ENST00000562836 SP100P23497 879 aaPredicted RBP10.21□□□□□ -0.77
CDH1-205ENST00000562836 GUCY1A2P33402 732 aa10.21□□□□□ -0.77
CDH1-205ENST00000562836 TUBA4AP68366 448 aa10.21□□□□□ -0.77
CDH1-205ENST00000562836 MCL1Q07820 350 aa10.21□□□□□ -0.77
CDH1-205ENST00000562836 TRIM28Q13263 835 aaKnown RBP10.21□□□□□ -0.77
CDH1-205ENST00000562836 VWA3BQ502W6 1294 aa10.21□□□□□ -0.77
CDH1-205ENST00000562836 TPTE2Q6XPS3 522 aa10.21□□□□□ -0.77
CDH1-205ENST00000562836 ZNF598Q86UK7 904 aaKnown RBP10.21□□□□□ -0.77
CDH1-205ENST00000562836 FUCA2Q9BTY2 467 aa10.21□□□□□ -0.77
CDH1-205ENST00000562836 TRPV6Q9H1D0 765 aa10.21□□□□□ -0.77
CDH1-205ENST00000562836 TTC41PQ6P2S7 1318 aa10.21□□□□□ -0.77
CDH1-205ENST00000562836 CCDC69A6NI79 296 aa10.21□□□□□ -0.78
CDH1-205ENST00000562836 CPLX1O14810 134 aa10.21□□□□□ -0.78
CDH1-205ENST00000562836 BIRC5O15392 142 aa10.21□□□□□ -0.78
CDH1-205ENST00000562836 COL6A2P12110 1019 aa10.21□□□□□ -0.78
CDH1-205ENST00000562836 ALAS1P13196 640 aa10.21□□□□□ -0.78
CDH1-205ENST00000562836 ATF7P17544 494 aaPredicted RBP10.21□□□□□ -0.78
CDH1-205ENST00000562836 PPP1R2P41236 205 aa10.21□□□□□ -0.78
CDH1-205ENST00000562836 PPP2R2AP63151 447 aa10.21□□□□□ -0.78
CDH1-205ENST00000562836 ELF3P78545 371 aaPredicted RBP10.21□□□□□ -0.78
CDH1-205ENST00000562836 MAP3K12Q12852 859 aa10.21□□□□□ -0.78
CDH1-205ENST00000562836 MTERF2Q49AM1 385 aa10.21□□□□□ -0.78
CDH1-205ENST00000562836 C9orf131Q5VYM1 1079 aa10.21□□□□□ -0.78
CDH1-205ENST00000562836 FOXB2Q5VYV0 432 aa10.21□□□□□ -0.78
CDH1-205ENST00000562836 PPP1R2P3Q6NXS1 205 aa10.21□□□□□ -0.78
CDH1-205ENST00000562836 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.21□□□□□ -0.78
CDH1-205ENST00000562836 METTL3Q86U44 580 aaKnown RBP10.21□□□□□ -0.78
CDH1-205ENST00000562836 PLA2G4DQ86XP0 818 aa10.21□□□□□ -0.78
CDH1-205ENST00000562836 CCDC83Q8IWF9 413 aa10.21□□□□□ -0.78
CDH1-205ENST00000562836 CFAP36Q96G28 342 aa10.21□□□□□ -0.78
CDH1-205ENST00000562836 L3MBTL3Q96JM7 780 aaPredicted RBP10.21□□□□□ -0.78
CDH1-205ENST00000562836 TSGA13Q96PP4 275 aa10.21□□□□□ -0.78
CDH1-205ENST00000562836 TRAPPC9Q96Q05 1148 aa10.21□□□□□ -0.78
CDH1-205ENST00000562836 KIAA1683Q9H0B3 1180 aa10.21□□□□□ -0.78
CDH1-205ENST00000562836 ZNF277Q9NRM2 450 aaPredicted RBP10.21□□□□□ -0.78
CDH1-205ENST00000562836 FARSBQ9NSD9 589 aaKnown RBP10.21□□□□□ -0.78
CDH1-205ENST00000562836 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.21□□□□□ -0.78
CDH1-205ENST00000562836 DPP7Q9UHL4 492 aa10.21□□□□□ -0.78
CDH1-205ENST00000562836 PCDHGA8Q9Y5G5 932 aa10.21□□□□□ -0.78
CDH1-205ENST00000562836 NCKAP5LQ9HCH0 1330 aa10.21□□□□□ -0.78
CDH1-205ENST00000562836 PARD3Q8TEW0 1356 aa10.21□□□□□ -0.78
CDH1-205ENST00000562836 TFPTP0C1Z6 253 aa10.2□□□□□ -0.78
CDH1-205ENST00000562836 FDX1P10109 184 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms