RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 INF2Q27J81 1249 aa6.83□□□□□ -1.32
SMG1-206ENST00000562668 NT5DC1Q5TFE4 455 aa6.83□□□□□ -1.32
SMG1-206ENST00000562668 LARP1BQ659C4 914 aaKnown RBP6.83□□□□□ -1.32
SMG1-206ENST00000562668 ZNF227Q86WZ6 799 aa6.83□□□□□ -1.32
SMG1-206ENST00000562668 TEX2Q8IWB9 1127 aa6.83□□□□□ -1.32
SMG1-206ENST00000562668 CARFQ8N187 725 aa6.83□□□□□ -1.32
SMG1-206ENST00000562668 FRS2Q8WU20 508 aa6.83□□□□□ -1.32
SMG1-206ENST00000562668 BTN2A2Q8WVV5 523 aa6.83□□□□□ -1.32
SMG1-206ENST00000562668 NOX5Q96PH1 765 aa6.83□□□□□ -1.32
SMG1-206ENST00000562668 AP5M1Q9H0R1 490 aa6.83□□□□□ -1.32
SMG1-206ENST00000562668 USP40Q9NVE5 1235 aa6.83□□□□□ -1.32
SMG1-206ENST00000562668 BTG4Q9NY30 223 aa6.83□□□□□ -1.32
SMG1-206ENST00000562668 MRVI1Q9Y6F6 885 aa6.83□□□□□ -1.32
SMG1-206ENST00000562668 GCC2Q8IWJ2 1684 aa6.83□□□□□ -1.32
SMG1-206ENST00000562668 VWDEQ8N2E2 1590 aa6.82□□□□□ -1.32
SMG1-206ENST00000562668 RIMS1Q86UR5 1692 aaKnown RBP6.82□□□□□ -1.32
SMG1-206ENST00000562668 TBX1O43435 398 aa6.82□□□□□ -1.32
SMG1-206ENST00000562668 TSPY4P0CV99 314 aa6.82□□□□□ -1.32
SMG1-206ENST00000562668 TSPY10P0CW01 314 aa6.82□□□□□ -1.32
SMG1-206ENST00000562668 CYP2C8P10632 490 aa6.82□□□□□ -1.32
SMG1-206ENST00000562668 E4F1Q66K89 784 aaPredicted RBP6.82□□□□□ -1.32
SMG1-206ENST00000562668 PRRT2Q7Z6L0 340 aaPredicted RBP6.82□□□□□ -1.32
SMG1-206ENST00000562668 FAM178BQ8IXR5 827 aa6.82□□□□□ -1.32
SMG1-206ENST00000562668 BDH2Q9BUT1 245 aa6.82□□□□□ -1.32
SMG1-206ENST00000562668 NTMQ9P121 344 aa6.82□□□□□ -1.32
SMG1-206ENST00000562668 ERBINQ96RT1 1412 aa6.82□□□□□ -1.32
SMG1-206ENST00000562668 KIF15Q9NS87 1388 aa6.82□□□□□ -1.32
SMG1-206ENST00000562668 PRDM15P57071 1507 aaPredicted RBP6.81□□□□□ -1.32
SMG1-206ENST00000562668 KDM5DQ9BY66 1539 aa6.81□□□□□ -1.32
SMG1-206ENST00000562668 MROH2AA6NES4 1674 aa6.81□□□□□ -1.32
SMG1-206ENST00000562668 C22orf46C9J442 243 aa6.81□□□□□ -1.32
SMG1-206ENST00000562668 SUSD5O60279 629 aa6.81□□□□□ -1.32
SMG1-206ENST00000562668 ITGAVP06756 1048 aa6.81□□□□□ -1.32
SMG1-206ENST00000562668 FPR2P25090 351 aa6.81□□□□□ -1.32
SMG1-206ENST00000562668 SLC6A11P48066 632 aa6.81□□□□□ -1.32
SMG1-206ENST00000562668 RPL11P62913 178 aaKnown RBP6.81□□□□□ -1.32
SMG1-206ENST00000562668 KCNAB2Q13303 367 aa6.81□□□□□ -1.32
SMG1-206ENST00000562668 RTP5Q14D33 572 aa6.81□□□□□ -1.32
SMG1-206ENST00000562668 IQCEQ6IPM2 695 aa6.81□□□□□ -1.32
SMG1-206ENST00000562668 ETV3LQ6ZN32 361 aa6.81□□□□□ -1.32
SMG1-206ENST00000562668 VPS37DQ86XT2 251 aa6.81□□□□□ -1.32
SMG1-206ENST00000562668 Q8N1Y9 231 aa6.81□□□□□ -1.32
SMG1-206ENST00000562668 SEC14L1Q92503 715 aa6.81□□□□□ -1.32
SMG1-206ENST00000562668 ZBTB8AQ96BR9 441 aa6.81□□□□□ -1.32
SMG1-206ENST00000562668 DDX11Q96FC9 970 aa6.81□□□□□ -1.32
SMG1-206ENST00000562668 PRKAG3Q9UGI9 489 aa6.81□□□□□ -1.32
SMG1-206ENST00000562668 UNC13BO14795 1591 aa6.81□□□□□ -1.32
SMG1-206ENST00000562668 ANKRD30AQ9BXX3 1397 aa6.81□□□□□ -1.32
SMG1-206ENST00000562668 CLTCQ00610 1675 aaKnown RBP6.81□□□□□ -1.32
SMG1-206ENST00000562668 MEFVO15553 781 aaPredicted RBP6.8□□□□□ -1.32
SMG1-206ENST00000562668 PRICKLE3O43900 615 aaPredicted RBP6.8□□□□□ -1.32
SMG1-206ENST00000562668 SNRPB2P08579 225 aaKnown RBP6.8□□□□□ -1.32
SMG1-206ENST00000562668 GJA9P57773 515 aa6.8□□□□□ -1.32
SMG1-206ENST00000562668 NAIPQ13075 1403 aa6.8□□□□□ -1.32
SMG1-206ENST00000562668 SV2CQ496J9 727 aa6.8□□□□□ -1.32
SMG1-206ENST00000562668 ZFYVE27Q5T4F4 411 aa6.8□□□□□ -1.32
SMG1-206ENST00000562668 NLRP10Q86W26 655 aa6.8□□□□□ -1.32
SMG1-206ENST00000562668 MIB1Q86YT6 1006 aa6.8□□□□□ -1.32
SMG1-206ENST00000562668 RIOX2Q8IUF8 465 aa6.8□□□□□ -1.32
SMG1-206ENST00000562668 CCDC103Q8IW40 242 aa6.8□□□□□ -1.32
SMG1-206ENST00000562668 LINC00482Q8N8I6 264 aa6.8□□□□□ -1.32
SMG1-206ENST00000562668 DIO2Q92813 273 aa6.8□□□□□ -1.32
SMG1-206ENST00000562668 GORASP1Q9BQQ3 440 aa6.8□□□□□ -1.32
SMG1-206ENST00000562668 SPATA6Q9NWH7 488 aaPredicted RBP6.8□□□□□ -1.32
SMG1-206ENST00000562668 C3P01024 1663 aa6.8□□□□□ -1.32
SMG1-206ENST00000562668 ZC3H13Q5T200 1668 aaKnown RBP6.8□□□□□ -1.32
SMG1-206ENST00000562668 FAM135AQ9P2D6 1515 aa6.8□□□□□ -1.32
SMG1-206ENST00000562668 PTPRMP28827 1452 aa6.79□□□□□ -1.32
SMG1-206ENST00000562668 CEP152O94986 1710 aa6.79□□□□□ -1.32
SMG1-206ENST00000562668 HFM1A2PYH4 1435 aa6.79□□□□□ -1.32
SMG1-206ENST00000562668 SGSM2O43147 1006 aa6.79□□□□□ -1.32
SMG1-206ENST00000562668 SCG5P05408 212 aa6.79□□□□□ -1.32
SMG1-206ENST00000562668 HOXC12P31275 282 aa6.79□□□□□ -1.32
SMG1-206ENST00000562668 ECI1P42126 302 aa6.79□□□□□ -1.32
SMG1-206ENST00000562668 SARSP49591 514 aaKnown RBP6.79□□□□□ -1.32
SMG1-206ENST00000562668 KRTAP10-2P60368 255 aa6.79□□□□□ -1.32
SMG1-206ENST00000562668 SMAD4Q13485 552 aaKnown RBP6.79□□□□□ -1.32
SMG1-206ENST00000562668 GNL2Q13823 731 aaKnown RBP6.79□□□□□ -1.32
SMG1-206ENST00000562668 UBXN11Q5T124 520 aa6.79□□□□□ -1.32
SMG1-206ENST00000562668 ACBD5Q5T8D3 534 aaPredicted RBP6.79□□□□□ -1.32
SMG1-206ENST00000562668 MROH9Q5TGP6 573 aa6.79□□□□□ -1.32
SMG1-206ENST00000562668 MRM1Q6IN84 353 aaKnown RBP6.79□□□□□ -1.32
SMG1-206ENST00000562668 TTLL7Q6ZT98 887 aa6.79□□□□□ -1.32
SMG1-206ENST00000562668 PCDH18Q9HCL0 1135 aa6.79□□□□□ -1.32
SMG1-206ENST00000562668 RRP7BPQ9NSQ0 103 aa6.79□□□□□ -1.32
SMG1-206ENST00000562668 LRP2BPQ9P2M1 347 aa6.79□□□□□ -1.32
SMG1-206ENST00000562668 TIMM13Q9Y5L4 95 aaPredicted RBP6.79□□□□□ -1.32
SMG1-206ENST00000562668 ABCC3O15438 1527 aa6.79□□□□□ -1.32
SMG1-206ENST00000562668 ANKRD50Q9ULJ7 1429 aa6.78□□□□□ -1.32
SMG1-206ENST00000562668 LMTK2Q8IWU2 1503 aa6.78□□□□□ -1.32
SMG1-206ENST00000562668 MYO1BO43795 1136 aa6.78□□□□□ -1.32
SMG1-206ENST00000562668 SMARCA5O60264 1052 aaPredicted RBP6.78□□□□□ -1.32
SMG1-206ENST00000562668 NOBOXO60393 691 aa6.78□□□□□ -1.32
SMG1-206ENST00000562668 DDAH1O94760 285 aa6.78□□□□□ -1.32
SMG1-206ENST00000562668 FGRP09769 529 aa6.78□□□□□ -1.32
SMG1-206ENST00000562668 TCF3P15923 654 aa6.78□□□□□ -1.32
SMG1-206ENST00000562668 GTF2A2P52657 109 aa6.78□□□□□ -1.32
SMG1-206ENST00000562668 TESK1Q15569 626 aa6.78□□□□□ -1.32
SMG1-206ENST00000562668 FXNQ16595 210 aa6.78□□□□□ -1.32
SMG1-206ENST00000562668 ZC3H18Q86VM9 953 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms