RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 PRAMEF22A3QJZ6 481 aa7.68□□□□□ -1.18
LRRC28-220ENST00000561253 SIGLEC6O43699 453 aa7.68□□□□□ -1.18
LRRC28-220ENST00000561253 PRAMEF1O95521 474 aa7.68□□□□□ -1.18
LRRC28-220ENST00000561253 GRIK1P39086 918 aa7.68□□□□□ -1.18
LRRC28-220ENST00000561253 KRT24Q2M2I5 525 aa7.68□□□□□ -1.18
LRRC28-220ENST00000561253 DNAJC10Q8IXB1 793 aa7.68□□□□□ -1.18
LRRC28-220ENST00000561253 LRRC47Q8N1G4 583 aaKnown RBP7.68□□□□□ -1.18
LRRC28-220ENST00000561253 LRRN4CLQ8ND94 238 aa7.68□□□□□ -1.18
LRRC28-220ENST00000561253 ENOX1Q8TC92 643 aaKnown RBP7.68□□□□□ -1.18
LRRC28-220ENST00000561253 HSPA12BQ96MM6 686 aa7.68□□□□□ -1.18
LRRC28-220ENST00000561253 NOL6Q9H6R4 1146 aaKnown RBP7.68□□□□□ -1.18
LRRC28-220ENST00000561253 APEX2Q9UBZ4 518 aa7.68□□□□□ -1.18
LRRC28-220ENST00000561253 ZMYM5Q9UJ78 669 aa7.68□□□□□ -1.18
LRRC28-220ENST00000561253 CCNL1Q9UK58 526 aaPredicted RBP7.68□□□□□ -1.18
LRRC28-220ENST00000561253 PLAGL2Q9UPG8 496 aa7.68□□□□□ -1.18
LRRC28-220ENST00000561253 ST14Q9Y5Y6 855 aa7.68□□□□□ -1.18
LRRC28-220ENST00000561253 MYH14Q7Z406 1995 aaKnown RBP7.68□□□□□ -1.18
LRRC28-220ENST00000561253 COL5A3P25940 1745 aaPredicted RBP7.67□□□□□ -1.18
LRRC28-220ENST00000561253 TMEM265A0A087WTH1 108 aa7.67□□□□□ -1.18
LRRC28-220ENST00000561253 SHISA3A0PJX4 238 aa7.67□□□□□ -1.18
LRRC28-220ENST00000561253 H3BS24 57 aa7.67□□□□□ -1.18
LRRC28-220ENST00000561253 MEIS1O00470 390 aa7.67□□□□□ -1.18
LRRC28-220ENST00000561253 CYP19A1P11511 503 aaPredicted RBP7.67□□□□□ -1.18
LRRC28-220ENST00000561253 PPP2R5DQ14738 602 aa7.67□□□□□ -1.18
LRRC28-220ENST00000561253 INTS5Q6P9B9 1019 aaKnown RBP7.67□□□□□ -1.18
LRRC28-220ENST00000561253 CRACR2BQ8N4Y2 399 aaPredicted RBP7.67□□□□□ -1.18
LRRC28-220ENST00000561253 FIBCD1Q8N539 461 aa7.67□□□□□ -1.18
LRRC28-220ENST00000561253 BVESQ8NE79 360 aa7.67□□□□□ -1.18
LRRC28-220ENST00000561253 SYTL5Q8TDW5 730 aaPredicted RBP7.67□□□□□ -1.18
LRRC28-220ENST00000561253 RCC1LQ96I51 464 aaKnown RBP7.67□□□□□ -1.18
LRRC28-220ENST00000561253 DUSP15Q9H1R2 295 aaPredicted RBP7.67□□□□□ -1.18
LRRC28-220ENST00000561253 ZSWIM5Q9P217 1185 aa7.67□□□□□ -1.18
LRRC28-220ENST00000561253 TSPYL4Q9UJ04 414 aa7.67□□□□□ -1.18
LRRC28-220ENST00000561253 AKT3Q9Y243 479 aa7.67□□□□□ -1.18
LRRC28-220ENST00000561253 DIS3Q9Y2L1 958 aaKnown RBP7.67□□□□□ -1.18
LRRC28-220ENST00000561253 KDM2BQ8NHM5 1336 aa7.67□□□□□ -1.18
LRRC28-220ENST00000561253 TAF1LQ8IZX4 1826 aa7.66□□□□□ -1.18
LRRC28-220ENST00000561253 TLDC2A0PJX2 215 aa7.66□□□□□ -1.18
LRRC28-220ENST00000561253 SRFP11831 508 aa7.66□□□□□ -1.18
LRRC28-220ENST00000561253 HOXA10P31260 410 aaPredicted RBP7.66□□□□□ -1.18
LRRC28-220ENST00000561253 GNAI1P63096 354 aa7.66□□□□□ -1.18
LRRC28-220ENST00000561253 POMZP3Q6PJE2 187 aa7.66□□□□□ -1.18
LRRC28-220ENST00000561253 THAP5Q7Z6K1 395 aa7.66□□□□□ -1.18
LRRC28-220ENST00000561253 TSR2Q969E8 191 aaKnown RBP7.66□□□□□ -1.18
LRRC28-220ENST00000561253 SGSM3Q96HU1 749 aa7.66□□□□□ -1.18
LRRC28-220ENST00000561253 FMNL2Q96PY5 1086 aa7.66□□□□□ -1.18
LRRC28-220ENST00000561253 SPATA9Q9BWV2 254 aa7.66□□□□□ -1.18
LRRC28-220ENST00000561253 HDAC8Q9BY41 377 aa7.66□□□□□ -1.18
LRRC28-220ENST00000561253 SF3B6Q9Y3B4 125 aaKnown RBP7.66□□□□□ -1.18
LRRC28-220ENST00000561253 USP16Q9Y5T5 823 aa7.66□□□□□ -1.18
LRRC28-220ENST00000561253 SNX11Q9Y5W9 270 aa7.66□□□□□ -1.18
LRRC28-220ENST00000561253 FANCIQ9NVI1 1328 aa7.66□□□□□ -1.18
LRRC28-220ENST00000561253 C4BP0C0L5 1744 aa7.66□□□□□ -1.18
LRRC28-220ENST00000561253 SMARCA5O60264 1052 aaPredicted RBP7.65□□□□□ -1.18
LRRC28-220ENST00000561253 ITGAVP06756 1048 aa7.65□□□□□ -1.18
LRRC28-220ENST00000561253 HOXB7P09629 217 aa7.65□□□□□ -1.18
LRRC28-220ENST00000561253 SNRPA1P09661 255 aaKnown RBP7.65□□□□□ -1.18
LRRC28-220ENST00000561253 TPP2P29144 1249 aaPredicted RBP7.65□□□□□ -1.18
LRRC28-220ENST00000561253 CRKLP46109 303 aaKnown RBP7.65□□□□□ -1.18
LRRC28-220ENST00000561253 CALD1Q05682 793 aaKnown RBP7.65□□□□□ -1.18
LRRC28-220ENST00000561253 SLFN5Q08AF3 891 aa7.65□□□□□ -1.18
LRRC28-220ENST00000561253 SLC15A2Q16348 729 aa7.65□□□□□ -1.18
LRRC28-220ENST00000561253 CWF19L1Q69YN2 538 aaKnown RBP7.65□□□□□ -1.18
LRRC28-220ENST00000561253 ZBED9Q6R2W3 1325 aa7.65□□□□□ -1.18
LRRC28-220ENST00000561253 PNPLA7Q6ZV29 1317 aa7.65□□□□□ -1.18
LRRC28-220ENST00000561253 TTC5Q8N0Z6 440 aa7.65□□□□□ -1.18
LRRC28-220ENST00000561253 LILRB2Q8N423 598 aa7.65□□□□□ -1.18
LRRC28-220ENST00000561253 ARHGEF39Q8N4T4 335 aa7.65□□□□□ -1.18
LRRC28-220ENST00000561253 ZNF655Q8N720 491 aaPredicted RBP7.65□□□□□ -1.18
LRRC28-220ENST00000561253 TSPYL6Q8N831 410 aa7.65□□□□□ -1.18
LRRC28-220ENST00000561253 ZNF513Q8N8E2 541 aaPredicted RBP7.65□□□□□ -1.18
LRRC28-220ENST00000561253 C8orf58Q8NAV2 365 aa7.65□□□□□ -1.18
LRRC28-220ENST00000561253 DAGLBQ8NCG7 672 aa7.65□□□□□ -1.18
LRRC28-220ENST00000561253 UBE2FQ969M7 185 aa7.65□□□□□ -1.18
LRRC28-220ENST00000561253 HRASLS5Q96KN8 279 aa7.65□□□□□ -1.18
LRRC28-220ENST00000561253 ZDHHC15Q96MV8 337 aa7.65□□□□□ -1.18
LRRC28-220ENST00000561253 PDGFDQ9GZP0 370 aaPredicted RBP7.65□□□□□ -1.18
LRRC28-220ENST00000561253 CGGBP1Q9UFW8 167 aaPredicted RBP7.65□□□□□ -1.18
LRRC28-220ENST00000561253 MINPP1Q9UNW1 487 aa7.65□□□□□ -1.18
LRRC28-220ENST00000561253 EMC9Q9Y3B6 208 aa7.65□□□□□ -1.18
LRRC28-220ENST00000561253 SOS1Q07889 1333 aaPredicted RBP7.64□□□□□ -1.19
LRRC28-220ENST00000561253 GSNP06396 782 aa7.64□□□□□ -1.19
LRRC28-220ENST00000561253 EIF5P55010 431 aaKnown RBP7.64□□□□□ -1.19
LRRC28-220ENST00000561253 HSP90AA2PQ14568 343 aaPredicted RBP7.64□□□□□ -1.19
LRRC28-220ENST00000561253 SMIM5Q71RC9 77 aa7.64□□□□□ -1.19
LRRC28-220ENST00000561253 TSPYL5Q86VY4 417 aaPredicted RBP7.64□□□□□ -1.19
LRRC28-220ENST00000561253 JAZF1Q86VZ6 243 aa7.64□□□□□ -1.19
LRRC28-220ENST00000561253 ZNF227Q86WZ6 799 aa7.64□□□□□ -1.19
LRRC28-220ENST00000561253 SH3TC2Q8TF17 1288 aa7.64□□□□□ -1.19
LRRC28-220ENST00000561253 LGR4Q9BXB1 951 aa7.64□□□□□ -1.19
LRRC28-220ENST00000561253 SEMA3GQ9NS98 782 aa7.64□□□□□ -1.19
LRRC28-220ENST00000561253 ZBTB1Q9Y2K1 713 aa7.64□□□□□ -1.19
LRRC28-220ENST00000561253 MRPL42Q9Y6G3 142 aaKnown RBP7.64□□□□□ -1.19
LRRC28-220ENST00000561253 UBR3Q6ZT12 1888 aa7.64□□□□□ -1.19
LRRC28-220ENST00000561253 TUBGCP6Q96RT7 1819 aa7.64□□□□□ -1.19
LRRC28-220ENST00000561253 PITPNM2Q9BZ72 1349 aa7.63□□□□□ -1.19
LRRC28-220ENST00000561253 A0A1W2PQU0 124 aa7.63□□□□□ -1.19
LRRC28-220ENST00000561253 SSU72P8A0A1W2PR75 194 aa7.63□□□□□ -1.19
LRRC28-220ENST00000561253 H0Y8X5 98 aa7.63□□□□□ -1.19
LRRC28-220ENST00000561253 COBLO75128 1261 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms