RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 MSL1Q68DK7 614 aa15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 TLDC1Q6P9B6 456 aa15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 C6orf89Q6UWU4 347 aa15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 PODNQ7Z5L7 613 aa15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 CABP7Q86V35 215 aa15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 OR8K1Q8NGG5 319 aa15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 LRRC15Q8TF66 581 aa15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 CAPZA3Q96KX2 299 aa15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 ZDHHC15Q96MV8 337 aa15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 DNAJC7Q99615 494 aa15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 CUEDC2Q9H467 287 aa15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 KCNQ5Q9NR82 932 aa15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 KLRC4O43908 158 aa15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 ZMYND10O75800 440 aa15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 CYLC1P35663 651 aaPredicted RBP15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 PRCPP42785 496 aa15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 ADCY7P51828 1080 aa15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 COPB1P53618 953 aaKnown RBP15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 SARNPP82979 210 aaKnown RBP15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 NFIAQ12857 509 aa15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 GLE1Q53GS7 698 aaKnown RBP15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 CYB5D1Q6P9G0 228 aa15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 CCDC121Q6ZUS5 278 aa15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 NLRP14Q86W24 1093 aa15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 C2CD5Q86YS7 1000 aa15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 MYCBPAPQ8TBZ2 947 aa15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 ARL8AQ96BM9 186 aa15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 COA7Q96BR5 231 aa15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 PURBQ96QR8 312 aaKnown RBP15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 PLIN2Q99541 437 aa15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 RABEP2Q9H5N1 569 aa15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 DBNDD1Q9H9R9 158 aa15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 MAGEF1Q9HAY2 307 aa15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 ZNF646O15015 1829 aaPredicted RBP15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 SIPA1L1O43166 1804 aa15.38■□□□□ 0.05
RABGGTA-220ENST00000560998 KLHL33A6NCF5 533 aa15.37■□□□□ 0.05
RABGGTA-220ENST00000560998 PLCG1P19174 1290 aa15.37■□□□□ 0.05
RABGGTA-220ENST00000560998 PAX7P23759 505 aa15.37■□□□□ 0.05
RABGGTA-220ENST00000560998 HERVK_113P62684 666 aa15.37■□□□□ 0.05
RABGGTA-220ENST00000560998 C2orf54Q08AI8 447 aa15.37■□□□□ 0.05
RABGGTA-220ENST00000560998 GRIK3Q13003 919 aa15.37■□□□□ 0.05
RABGGTA-220ENST00000560998 SEMA3FQ13275 785 aa15.37■□□□□ 0.05
RABGGTA-220ENST00000560998 NBPF9Q3BBW0 867 aa15.37■□□□□ 0.05
RABGGTA-220ENST00000560998 PPP4R3AQ6IN85 833 aa15.37■□□□□ 0.05
RABGGTA-220ENST00000560998 KIAA1328Q86T90 577 aa15.37■□□□□ 0.05
RABGGTA-220ENST00000560998 ZFPM1Q8IX07 1006 aa15.37■□□□□ 0.05
RABGGTA-220ENST00000560998 ADSSL1Q8N142 457 aa15.37■□□□□ 0.05
RABGGTA-220ENST00000560998 MAB21L3Q8N8X9 362 aa15.37■□□□□ 0.05
RABGGTA-220ENST00000560998 CCDC114Q96M63 670 aa15.37■□□□□ 0.05
RABGGTA-220ENST00000560998 JMJD4Q9H9V9 463 aa15.37■□□□□ 0.05
RABGGTA-220ENST00000560998 DDX20Q9UHI6 824 aaKnown RBP15.37■□□□□ 0.05
RABGGTA-220ENST00000560998 SCN9AQ15858 1988 aa15.37■□□□□ 0.05
RABGGTA-220ENST00000560998 A0A1W2PQC6 194 aa15.36■□□□□ 0.05
RABGGTA-220ENST00000560998 HMGB1P1B2RPK0 211 aaPredicted RBP15.36■□□□□ 0.05
RABGGTA-220ENST00000560998 SRGAP2O75044 1071 aa15.36■□□□□ 0.05
RABGGTA-220ENST00000560998 IPO7O95373 1038 aaKnown RBP15.36■□□□□ 0.05
RABGGTA-220ENST00000560998 FKBP1AP62942 108 aaKnown RBP15.36■□□□□ 0.05
RABGGTA-220ENST00000560998 STYK1Q6J9G0 422 aa15.36■□□□□ 0.05
RABGGTA-220ENST00000560998 PPP1R18Q6NYC8 613 aa15.36■□□□□ 0.05
RABGGTA-220ENST00000560998 ADGRF4Q8IZF3 695 aa15.36■□□□□ 0.05
RABGGTA-220ENST00000560998 MREGQ8N565 214 aa15.36■□□□□ 0.05
RABGGTA-220ENST00000560998 ARFGAP2Q8N6H7 521 aa15.36■□□□□ 0.05
RABGGTA-220ENST00000560998 CCT8L2Q96SF2 557 aa15.36■□□□□ 0.05
RABGGTA-220ENST00000560998 MRIQ9BWK5 157 aa15.36■□□□□ 0.05
RABGGTA-220ENST00000560998 TRIM10Q9UDY6 481 aa15.36■□□□□ 0.05
RABGGTA-220ENST00000560998 SLX4Q8IY92 1834 aa15.36■□□□□ 0.05
RABGGTA-220ENST00000560998 PNMA6FA0A0J9YX94 578 aa15.36■□□□□ 0.05
RABGGTA-220ENST00000560998 RHOBTB3O94955 611 aa15.36■□□□□ 0.05
RABGGTA-220ENST00000560998 NR1D1P20393 614 aa15.36■□□□□ 0.05
RABGGTA-220ENST00000560998 GRIPAP1Q4V328 841 aa15.36■□□□□ 0.05
RABGGTA-220ENST00000560998 TTC19Q6DKK2 380 aaPredicted RBP15.36■□□□□ 0.05
RABGGTA-220ENST00000560998 ARMC9Q7Z3E5 817 aa15.36■□□□□ 0.05
RABGGTA-220ENST00000560998 CCDC170Q8IYT3 715 aa15.36■□□□□ 0.05
RABGGTA-220ENST00000560998 FUKQ8N0W3 1084 aa15.36■□□□□ 0.05
RABGGTA-220ENST00000560998 HOOK2Q96ED9 719 aa15.36■□□□□ 0.05
RABGGTA-220ENST00000560998 MTMR9Q96QG7 549 aa15.36■□□□□ 0.05
RABGGTA-220ENST00000560998 STIM2Q9P246 746 aa15.36■□□□□ 0.05
RABGGTA-220ENST00000560998 SNX12Q9UMY4 172 aa15.36■□□□□ 0.05
RABGGTA-220ENST00000560998 MAPK8IP1Q9UQF2 711 aa15.36■□□□□ 0.05
RABGGTA-220ENST00000560998 PDE2AO00408 941 aaPredicted RBP15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 MPHOSPH10O00566 681 aaKnown RBP15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 PPP1R11O60927 126 aaPredicted RBP15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 IDEP14735 1019 aa15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 CCT6AP40227 531 aaKnown RBP15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 MDH1P40925 334 aaKnown RBP15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 TECP42680 631 aa15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 MEA1Q16626 185 aa15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 TCP11X2Q5H9J9 407 aa15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 DACT2Q5SW24 774 aa15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 GPATCH4Q5T3I0 446 aaKnown RBP15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 STRIP1Q5VSL9 837 aa15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 TTBK2Q6IQ55 1244 aa15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 RSRC1Q96IZ7 334 aaKnown RBP15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 RNPC3Q96LT9 517 aaKnown RBP15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 CCDC17Q96LX7 622 aa15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 ZIM3Q96PE6 472 aa15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 MMTAG2Q9BU76 263 aaKnown RBP15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 DNAJC18Q9H819 358 aa15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 PCDHAC2Q9Y5I4 1007 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms