RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 RRP36Q96EU6 259 aaKnown RBP6.31□□□□□ -1.4
ZEB1-220ENST00000560909 PIGSQ96S52 555 aa6.31□□□□□ -1.4
ZEB1-220ENST00000560909 P2RX7Q99572 595 aaKnown RBP6.31□□□□□ -1.4
ZEB1-220ENST00000560909 SLC26A6Q9BXS9 759 aa6.31□□□□□ -1.4
ZEB1-220ENST00000560909 ZMYND12Q9H0C1 365 aa6.31□□□□□ -1.4
ZEB1-220ENST00000560909 ASCC2Q9H1I8 757 aaPredicted RBP6.31□□□□□ -1.4
ZEB1-220ENST00000560909 CPVLQ9H3G5 476 aa6.31□□□□□ -1.4
ZEB1-220ENST00000560909 RBPJLQ9UBG7 517 aa6.31□□□□□ -1.4
ZEB1-220ENST00000560909 MORF4L1Q9UBU8 362 aa6.31□□□□□ -1.4
ZEB1-220ENST00000560909 ZNF214Q9UL59 606 aaPredicted RBP6.31□□□□□ -1.4
ZEB1-220ENST00000560909 SMC3Q9UQE7 1217 aa6.31□□□□□ -1.4
ZEB1-220ENST00000560909 KIF3AQ9Y496 699 aa6.31□□□□□ -1.4
ZEB1-220ENST00000560909 RLFQ13129 1914 aa6.31□□□□□ -1.4
ZEB1-220ENST00000560909 BAZ2BQ9UIF8 2168 aaKnown RBP6.3□□□□□ -1.4
ZEB1-220ENST00000560909 ATAD5Q96QE3 1844 aa6.3□□□□□ -1.4
ZEB1-220ENST00000560909 CCL15-CCL14A0A0B4J2E2 113 aa6.3□□□□□ -1.4
ZEB1-220ENST00000560909 KRTAP9-7A8MTY7 169 aa6.3□□□□□ -1.4
ZEB1-220ENST00000560909 STXBP3O00186 592 aa6.3□□□□□ -1.4
ZEB1-220ENST00000560909 PIK3CDO00329 1044 aa6.3□□□□□ -1.4
ZEB1-220ENST00000560909 IGF2BP3O00425 579 aaKnown RBP eCLIP6.3□□□□□ -1.4
ZEB1-220ENST00000560909 OPLAHO14841 1288 aa6.3□□□□□ -1.4
ZEB1-220ENST00000560909 CNMDO75829 334 aa6.3□□□□□ -1.4
ZEB1-220ENST00000560909 FLOT1O75955 427 aa6.3□□□□□ -1.4
ZEB1-220ENST00000560909 BRD1O95696 1058 aa6.3□□□□□ -1.4
ZEB1-220ENST00000560909 ICAM1P05362 532 aa6.3□□□□□ -1.4
ZEB1-220ENST00000560909 U2AF2P26368 475 aaKnown RBP eCLIP6.3□□□□□ -1.42e-9■■■■■ 49.8
ZEB1-220ENST00000560909 GCLCP48506 637 aaPredicted RBP6.3□□□□□ -1.4
ZEB1-220ENST00000560909 HERVK_113P62684 666 aa6.3□□□□□ -1.4
ZEB1-220ENST00000560909 TMEM132BQ14DG7 1078 aa6.3□□□□□ -1.4
ZEB1-220ENST00000560909 ZYXQ15942 572 aaKnown RBP6.3□□□□□ -1.4
ZEB1-220ENST00000560909 CDC37Q16543 378 aaPredicted RBP6.3□□□□□ -1.4
ZEB1-220ENST00000560909 CCL15Q16663 113 aa6.3□□□□□ -1.4
ZEB1-220ENST00000560909 TUSC1Q2TAM9 212 aa6.3□□□□□ -1.4
ZEB1-220ENST00000560909 TKFCQ3LXA3 575 aa6.3□□□□□ -1.4
ZEB1-220ENST00000560909 WWC2Q6AWC2 1192 aa6.3□□□□□ -1.4
ZEB1-220ENST00000560909 FAM43AQ8N2R8 423 aa6.3□□□□□ -1.4
ZEB1-220ENST00000560909 KDF1Q8NAX2 398 aaPredicted RBP6.3□□□□□ -1.4
ZEB1-220ENST00000560909 CLEC4DQ8WXI8 215 aa6.3□□□□□ -1.4
ZEB1-220ENST00000560909 TNFRSF25Q93038 417 aa6.3□□□□□ -1.4
ZEB1-220ENST00000560909 ATG4CQ96DT6 458 aa6.3□□□□□ -1.4
ZEB1-220ENST00000560909 DDX11Q96FC9 970 aa6.3□□□□□ -1.4
ZEB1-220ENST00000560909 CAPNS2Q96L46 248 aa6.3□□□□□ -1.4
ZEB1-220ENST00000560909 AIFM3Q96NN9 605 aa6.3□□□□□ -1.4
ZEB1-220ENST00000560909 ZIC5Q96T25 663 aa6.3□□□□□ -1.4
ZEB1-220ENST00000560909 PHF20Q9BVI0 1012 aa6.3□□□□□ -1.4
ZEB1-220ENST00000560909 AMNQ9BXJ7 453 aa6.3□□□□□ -1.4
ZEB1-220ENST00000560909 ABT1Q9ULW3 272 aaKnown RBP6.3□□□□□ -1.4
ZEB1-220ENST00000560909 NAP1L2Q9ULW6 460 aaPredicted RBP6.3□□□□□ -1.4
ZEB1-220ENST00000560909 MTMR6Q9Y217 621 aa6.3□□□□□ -1.4
ZEB1-220ENST00000560909 ZDHHC9Q9Y397 364 aa6.3□□□□□ -1.4
ZEB1-220ENST00000560909 RABGAP1Q9Y3P9 1069 aa6.3□□□□□ -1.4
ZEB1-220ENST00000560909 OAS3Q9Y6K5 1087 aaKnown RBP6.3□□□□□ -1.4
ZEB1-220ENST00000560909 LOC285556D6RIA3 1793 aa6.3□□□□□ -1.4
ZEB1-220ENST00000560909 PTPRFP10586 1907 aa6.3□□□□□ -1.4
ZEB1-220ENST00000560909 MYH4Q9Y623 1939 aa6.3□□□□□ -1.4
ZEB1-220ENST00000560909 CEP350Q5VT06 3117 aa6.3□□□□□ -1.4
ZEB1-220ENST00000560909 PDHXO00330 501 aa6.29□□□□□ -1.4
ZEB1-220ENST00000560909 STX6O43752 255 aa6.29□□□□□ -1.4
ZEB1-220ENST00000560909 ZBED4O75132 1171 aa6.29□□□□□ -1.4
ZEB1-220ENST00000560909 HSPA6P17066 643 aa6.29□□□□□ -1.4
ZEB1-220ENST00000560909 NDUFV2P19404 249 aa6.29□□□□□ -1.4
ZEB1-220ENST00000560909 CALML3P27482 149 aa6.29□□□□□ -1.4
ZEB1-220ENST00000560909 CLK2P49760 499 aaKnown RBP6.29□□□□□ -1.4
ZEB1-220ENST00000560909 AKAP17AQ02040 695 aaKnown RBP6.29□□□□□ -1.4
ZEB1-220ENST00000560909 KIF23Q02241 960 aaPredicted RBP6.29□□□□□ -1.4
ZEB1-220ENST00000560909 SREBF2Q12772 1141 aa6.29□□□□□ -1.4
ZEB1-220ENST00000560909 LARP1BQ659C4 914 aaKnown RBP6.29□□□□□ -1.4
ZEB1-220ENST00000560909 KRT40Q6A162 431 aa6.29□□□□□ -1.4
ZEB1-220ENST00000560909 C17orf99Q6UX52 265 aa6.29□□□□□ -1.4
ZEB1-220ENST00000560909 GADL1Q6ZQY3 521 aa6.29□□□□□ -1.4
ZEB1-220ENST00000560909 CLEC17AQ6ZS10 378 aa6.29□□□□□ -1.4
ZEB1-220ENST00000560909 FBXO11Q86XK2 927 aa6.29□□□□□ -1.4
ZEB1-220ENST00000560909 RIOX2Q8IUF8 465 aa6.29□□□□□ -1.4
ZEB1-220ENST00000560909 CCDC82Q8N4S0 544 aa6.29□□□□□ -1.4
ZEB1-220ENST00000560909 SHCBP1Q8NEM2 672 aa6.29□□□□□ -1.4
ZEB1-220ENST00000560909 ALG1Q9BT22 464 aa6.29□□□□□ -1.4
ZEB1-220ENST00000560909 TEX13BQ9BXU2 312 aa6.29□□□□□ -1.4
ZEB1-220ENST00000560909 TANGO6Q9C0B7 1094 aa6.29□□□□□ -1.4
ZEB1-220ENST00000560909 GLT8D2Q9H1C3 349 aa6.29□□□□□ -1.4
ZEB1-220ENST00000560909 VAT1LQ9HCJ6 419 aa6.29□□□□□ -1.4
ZEB1-220ENST00000560909 TXNRD2Q9NNW7 524 aa6.29□□□□□ -1.4
ZEB1-220ENST00000560909 MAP3K20Q9NYL2 800 aaKnown RBP6.29□□□□□ -1.4
ZEB1-220ENST00000560909 BTBD7Q9P203 1132 aa6.29□□□□□ -1.4
ZEB1-220ENST00000560909 MTMR7Q9Y216 660 aa6.29□□□□□ -1.4
ZEB1-220ENST00000560909 PCDHA1Q9Y5I3 950 aa6.29□□□□□ -1.4
ZEB1-220ENST00000560909 ABCB11O95342 1321 aa6.28□□□□□ -1.4
ZEB1-220ENST00000560909 hCG_1642624A0A1W2PR95 340 aa6.28□□□□□ -1.4
ZEB1-220ENST00000560909 SPDYE3A6NKU9 549 aa6.28□□□□□ -1.4
ZEB1-220ENST00000560909 MEIS2O14770 477 aa6.28□□□□□ -1.4
ZEB1-220ENST00000560909 CA12O43570 354 aa6.28□□□□□ -1.4
ZEB1-220ENST00000560909 EDIL3O43854 480 aa6.28□□□□□ -1.4
ZEB1-220ENST00000560909 TLR2O60603 784 aa6.28□□□□□ -1.4
ZEB1-220ENST00000560909 DTNBO60941 627 aa6.28□□□□□ -1.4
ZEB1-220ENST00000560909 SLC25A27O95847 323 aa6.28□□□□□ -1.4
ZEB1-220ENST00000560909 MMP1P03956 469 aa6.28□□□□□ -1.4
ZEB1-220ENST00000560909 THBS1P07996 1170 aa6.28□□□□□ -1.4
ZEB1-220ENST00000560909 COPB2P35606 906 aa6.28□□□□□ -1.4
ZEB1-220ENST00000560909 STAT3P40763 770 aa6.28□□□□□ -1.4
ZEB1-220ENST00000560909 HSD17B4P51659 736 aa6.28□□□□□ -1.4
ZEB1-220ENST00000560909 C1QTNF8P60827 252 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms