RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 TREHO43280 583 aa10.49□□□□□ -0.73
RABGGTA-217ENST00000560521 EIF3JO75822 258 aaKnown RBP10.49□□□□□ -0.73
RABGGTA-217ENST00000560521 RGS20O76081 388 aa10.49□□□□□ -0.73
RABGGTA-217ENST00000560521 MS4A1P11836 297 aa10.49□□□□□ -0.73
RABGGTA-217ENST00000560521 HOXC8P31273 242 aa10.49□□□□□ -0.73
RABGGTA-217ENST00000560521 CBX2Q14781 532 aaPredicted RBP10.49□□□□□ -0.73
RABGGTA-217ENST00000560521 HSDL1Q3SXM5 330 aa10.49□□□□□ -0.73
RABGGTA-217ENST00000560521 VPS53Q5VIR6 699 aa10.49□□□□□ -0.73
RABGGTA-217ENST00000560521 ATOH1Q92858 354 aaPredicted RBP10.49□□□□□ -0.73
RABGGTA-217ENST00000560521 ATP6V0A1Q93050 837 aa10.49□□□□□ -0.73
RABGGTA-217ENST00000560521 C11orf84Q9BUA3 381 aaPredicted RBP10.49□□□□□ -0.73
RABGGTA-217ENST00000560521 UBA5Q9GZZ9 404 aa10.49□□□□□ -0.73
RABGGTA-217ENST00000560521 MAF1Q9H063 256 aa10.49□□□□□ -0.73
RABGGTA-217ENST00000560521 RNPEPQ9H4A4 650 aa10.49□□□□□ -0.73
RABGGTA-217ENST00000560521 RC3H2Q9HBD1 1191 aaKnown RBP10.49□□□□□ -0.73
RABGGTA-217ENST00000560521 CLEC1BQ9P126 229 aa10.49□□□□□ -0.73
RABGGTA-217ENST00000560521 MRVI1Q9Y6F6 885 aa10.49□□□□□ -0.73
RABGGTA-217ENST00000560521 C17orf102A2RUQ5 167 aa10.48□□□□□ -0.73
RABGGTA-217ENST00000560521 SORBS3O60504 671 aa10.48□□□□□ -0.73
RABGGTA-217ENST00000560521 CSPG5O95196 566 aa10.48□□□□□ -0.73
RABGGTA-217ENST00000560521 NR3C2P08235 984 aa10.48□□□□□ -0.73
RABGGTA-217ENST00000560521 CTSHP09668 335 aa10.48□□□□□ -0.73
RABGGTA-217ENST00000560521 GOLGA8HP0CJ92 632 aa10.48□□□□□ -0.73
RABGGTA-217ENST00000560521 EIF2AK2P19525 551 aaKnown RBP10.48□□□□□ -0.73
RABGGTA-217ENST00000560521 AVPR2P30518 371 aa10.48□□□□□ -0.73
RABGGTA-217ENST00000560521 RRP1P56182 461 aaKnown RBP10.48□□□□□ -0.73
RABGGTA-217ENST00000560521 SP2Q02086 613 aa10.48□□□□□ -0.73
RABGGTA-217ENST00000560521 SIGLEC14Q08ET2 396 aa10.48□□□□□ -0.73
RABGGTA-217ENST00000560521 RRP12Q5JTH9 1297 aaKnown RBP10.48□□□□□ -0.73
RABGGTA-217ENST00000560521 CELF3Q5SZQ8 465 aaKnown RBP10.48□□□□□ -0.73
RABGGTA-217ENST00000560521 ARHGEF16Q5VV41 709 aa10.48□□□□□ -0.73
RABGGTA-217ENST00000560521 ADGRD2Q7Z7M1 963 aa10.48□□□□□ -0.73
RABGGTA-217ENST00000560521 CLP1Q92989 425 aaKnown RBP10.48□□□□□ -0.73
RABGGTA-217ENST00000560521 ASIC4Q96FT7 647 aa10.48□□□□□ -0.73
RABGGTA-217ENST00000560521 LAMA4Q16363 1823 aa10.48□□□□□ -0.73
RABGGTA-217ENST00000560521 H0Y858 1186 aa10.47□□□□□ -0.73
RABGGTA-217ENST00000560521 MMP1P03956 469 aa10.47□□□□□ -0.73
RABGGTA-217ENST00000560521 SMIM10L2AP0DMW4 78 aa10.47□□□□□ -0.73
RABGGTA-217ENST00000560521 SMIM10L2BP0DMW5 78 aa10.47□□□□□ -0.73
RABGGTA-217ENST00000560521 DNAJB1P25685 340 aa10.47□□□□□ -0.73
RABGGTA-217ENST00000560521 NDUFV1P49821 464 aa10.47□□□□□ -0.73
RABGGTA-217ENST00000560521 COASYQ13057 564 aa10.47□□□□□ -0.73
RABGGTA-217ENST00000560521 CDC37Q16543 378 aaPredicted RBP10.47□□□□□ -0.73
RABGGTA-217ENST00000560521 SMRP1Q8NCR6 262 aa10.47□□□□□ -0.73
RABGGTA-217ENST00000560521 PI4K2BQ8TCG2 481 aa10.47□□□□□ -0.73
RABGGTA-217ENST00000560521 APBB2Q92870 758 aa10.47□□□□□ -0.73
RABGGTA-217ENST00000560521 ZNF689Q96CS4 500 aaPredicted RBP10.47□□□□□ -0.73
RABGGTA-217ENST00000560521 GPATCH3Q96I76 525 aa10.47□□□□□ -0.73
RABGGTA-217ENST00000560521 SPATA33Q96N06 139 aa10.47□□□□□ -0.73
RABGGTA-217ENST00000560521 TTC14Q96N46 770 aa10.47□□□□□ -0.73
RABGGTA-217ENST00000560521 FSD1Q9BTV5 496 aa10.47□□□□□ -0.73
RABGGTA-217ENST00000560521 BCAS3Q9H6U6 928 aa10.47□□□□□ -0.73
RABGGTA-217ENST00000560521 DCTPP1Q9H773 170 aa10.47□□□□□ -0.73
RABGGTA-217ENST00000560521 PXMP2Q9NR77 195 aa10.47□□□□□ -0.73
RABGGTA-217ENST00000560521 TLR9Q9NR96 1032 aa10.47□□□□□ -0.73
RABGGTA-217ENST00000560521 TOMM22Q9NS69 142 aa10.47□□□□□ -0.73
RABGGTA-217ENST00000560521 PLAGL2Q9UPG8 496 aa10.47□□□□□ -0.73
RABGGTA-217ENST00000560521 RWDD3Q9Y3V2 267 aa10.47□□□□□ -0.73
RABGGTA-217ENST00000560521 ABCB11O95342 1321 aa10.47□□□□□ -0.73
RABGGTA-217ENST00000560521 VPS13AQ96RL7 3174 aa10.47□□□□□ -0.73
RABGGTA-217ENST00000560521 PROB1E7EW31 1015 aa10.46□□□□□ -0.73
RABGGTA-217ENST00000560521 H3BRB1 525 aa10.46□□□□□ -0.73
RABGGTA-217ENST00000560521 CAND2O75155 1236 aa10.46□□□□□ -0.73
RABGGTA-217ENST00000560521 GGPS1O95749 300 aa10.46□□□□□ -0.73
RABGGTA-217ENST00000560521 MYCLP12524 364 aaPredicted RBP10.46□□□□□ -0.73
RABGGTA-217ENST00000560521 ALX1Q15699 326 aa10.46□□□□□ -0.73
RABGGTA-217ENST00000560521 FAM26DQ5JW98 314 aa10.46□□□□□ -0.73
RABGGTA-217ENST00000560521 ASCL5Q7RTU5 278 aa10.46□□□□□ -0.73
RABGGTA-217ENST00000560521 MCF2L2Q86YR7 1114 aa10.46□□□□□ -0.73
RABGGTA-217ENST00000560521 PLVAPQ9BX97 442 aa10.46□□□□□ -0.73
RABGGTA-217ENST00000560521 IRF2BPLQ9H1B7 796 aa10.46□□□□□ -0.73
RABGGTA-217ENST00000560521 TUT1Q9H6E5 874 aaKnown RBP10.46□□□□□ -0.73
RABGGTA-217ENST00000560521 ADGRA3Q8IWK6 1321 aa10.46□□□□□ -0.73
RABGGTA-217ENST00000560521 TTC41PQ6P2S7 1318 aa10.45□□□□□ -0.74
RABGGTA-217ENST00000560521 ENPP3O14638 875 aa10.45□□□□□ -0.74
RABGGTA-217ENST00000560521 GLP2RO95838 553 aa10.45□□□□□ -0.74
RABGGTA-217ENST00000560521 PDGFBP01127 241 aaPredicted RBP10.45□□□□□ -0.74
RABGGTA-217ENST00000560521 FGAP02671 866 aa10.45□□□□□ -0.74
RABGGTA-217ENST00000560521 CHRNA1P02708 482 aa10.45□□□□□ -0.74
RABGGTA-217ENST00000560521 LGALS2P05162 132 aa10.45□□□□□ -0.74
RABGGTA-217ENST00000560521 ITGB1P05556 798 aa10.45□□□□□ -0.74
RABGGTA-217ENST00000560521 HSPD1P10809 573 aaKnown RBP10.45□□□□□ -0.74
RABGGTA-217ENST00000560521 ADAM17P78536 824 aa10.45□□□□□ -0.74
RABGGTA-217ENST00000560521 QRICH1Q2TAL8 776 aa10.45□□□□□ -0.74
RABGGTA-217ENST00000560521 GPATCH4Q5T3I0 446 aaKnown RBP10.45□□□□□ -0.74
RABGGTA-217ENST00000560521 KCNV1Q6PIU1 500 aa10.45□□□□□ -0.74
RABGGTA-217ENST00000560521 ADGRF4Q8IZF3 695 aa10.45□□□□□ -0.74
RABGGTA-217ENST00000560521 EFHBQ8N7U6 833 aa10.45□□□□□ -0.74
RABGGTA-217ENST00000560521 SPPL3Q8TCT6 385 aa10.45□□□□□ -0.74
RABGGTA-217ENST00000560521 GPKOWQ92917 476 aaPredicted RBP eCLIP10.45□□□□□ -0.74
RABGGTA-217ENST00000560521 P2RX5Q93086 422 aa10.45□□□□□ -0.74
RABGGTA-217ENST00000560521 ZFP91Q96JP5 570 aaPredicted RBP10.45□□□□□ -0.74
RABGGTA-217ENST00000560521 PHF7Q9BWX1 381 aaPredicted RBP10.45□□□□□ -0.74
RABGGTA-217ENST00000560521 SETD4Q9NVD3 440 aa10.45□□□□□ -0.74
RABGGTA-217ENST00000560521 MRPL11Q9Y3B7 192 aaKnown RBP10.45□□□□□ -0.74
RABGGTA-217ENST00000560521 USP15Q9Y4E8 981 aaPredicted RBP10.45□□□□□ -0.74
RABGGTA-217ENST00000560521 WDR81Q562E7 1941 aa10.45□□□□□ -0.74
RABGGTA-217ENST00000560521 OPLAHO14841 1288 aa10.44□□□□□ -0.74
RABGGTA-217ENST00000560521 DGKIO75912 1065 aa10.44□□□□□ -0.74
RABGGTA-217ENST00000560521 CFBP00751 764 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms