RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 AP1B1Q10567 949 aa14.89□□□□□ -0.03
CSPG4P12-202ENST00000559989 TCIRG1Q13488 830 aa14.89□□□□□ -0.03
CSPG4P12-202ENST00000559989 ZYXQ15942 572 aaKnown RBP14.89□□□□□ -0.03
CSPG4P12-202ENST00000559989 KRT26Q7Z3Y9 468 aa14.89□□□□□ -0.03
CSPG4P12-202ENST00000559989 ABI1Q8IZP0 508 aa14.89□□□□□ -0.03
CSPG4P12-202ENST00000559989 ZFP42Q96MM3 310 aa14.89□□□□□ -0.03
CSPG4P12-202ENST00000559989 ZFP69BQ9UJL9 534 aa14.89□□□□□ -0.03
CSPG4P12-202ENST00000559989 PGRMC1O00264 195 aaKnown RBP14.89□□□□□ -0.03
CSPG4P12-202ENST00000559989 CIITAP33076 1130 aa14.89□□□□□ -0.03
CSPG4P12-202ENST00000559989 HADHAP40939 763 aa14.89□□□□□ -0.03
CSPG4P12-202ENST00000559989 TFDP1Q14186 410 aa14.89□□□□□ -0.03
CSPG4P12-202ENST00000559989 MAGEA9P43362 315 aa14.89□□□□□ -0.03
CSPG4P12-202ENST00000559989 VPS39Q96JC1 886 aa14.89□□□□□ -0.03
CSPG4P12-202ENST00000559989 IL10P22301 178 aa14.89□□□□□ -0.03
CSPG4P12-202ENST00000559989 CDC25BP30305 580 aa14.89□□□□□ -0.03
CSPG4P12-202ENST00000559989 VCPP55072 806 aaKnown RBP14.89□□□□□ -0.03
CSPG4P12-202ENST00000559989 BTNL9Q6UXG8 535 aa14.89□□□□□ -0.03
CSPG4P12-202ENST00000559989 NNTQ13423 1086 aa14.89□□□□□ -0.03
CSPG4P12-202ENST00000559989 MYO1DO94832 1006 aa14.89□□□□□ -0.03
CSPG4P12-202ENST00000559989 MAP4P27816 1152 aaKnown RBP14.89□□□□□ -0.03
CSPG4P12-202ENST00000559989 ARL13BQ3SXY8 428 aa14.89□□□□□ -0.03
CSPG4P12-202ENST00000559989 EXT2Q93063 718 aa14.89□□□□□ -0.03
CSPG4P12-202ENST00000559989 PITPNM3Q9BZ71 974 aa14.89□□□□□ -0.03
CSPG4P12-202ENST00000559989 RNF14Q9UBS8 474 aa14.89□□□□□ -0.03
CSPG4P12-202ENST00000559989 FANCD2Q9BXW9 1451 aa14.88□□□□□ -0.03
CSPG4P12-202ENST00000559989 SOS2Q07890 1332 aaPredicted RBP14.88□□□□□ -0.03
CSPG4P12-202ENST00000559989 FMNL1O95466 1100 aaPredicted RBP14.88□□□□□ -0.03
CSPG4P12-202ENST00000559989 PLTPP55058 493 aa14.88□□□□□ -0.03
CSPG4P12-202ENST00000559989 ADCY1Q08828 1119 aa14.88□□□□□ -0.03
CSPG4P12-202ENST00000559989 E2F4Q16254 413 aa14.88□□□□□ -0.03
CSPG4P12-202ENST00000559989 TESK2Q96S53 571 aa14.88□□□□□ -0.03
CSPG4P12-202ENST00000559989 AS3MTQ9HBK9 375 aa14.88□□□□□ -0.03
CSPG4P12-202ENST00000559989 ADA2Q9NZK5 511 aa14.88□□□□□ -0.03
CSPG4P12-202ENST00000559989 TBC1D4O60343 1298 aa14.88□□□□□ -0.03
CSPG4P12-202ENST00000559989 TRAF3IP3Q9Y228 551 aa14.88□□□□□ -0.03
CSPG4P12-202ENST00000559989 COL4A3BPQ9Y5P4 624 aa14.88□□□□□ -0.03
CSPG4P12-202ENST00000559989 XKR9Q5GH70 373 aa14.88□□□□□ -0.03
CSPG4P12-202ENST00000559989 ELMSAN1Q6PJG2 1045 aa14.88□□□□□ -0.03
CSPG4P12-202ENST00000559989 RBM46Q8TBY0 533 aaKnown RBP14.88□□□□□ -0.03
CSPG4P12-202ENST00000559989 EXOC4Q96A65 974 aa14.88□□□□□ -0.03
CSPG4P12-202ENST00000559989 ATP8A2Q9NTI2 1148 aa14.88□□□□□ -0.03
CSPG4P12-202ENST00000559989 PPARGC1AQ9UBK2 798 aaKnown RBP14.88□□□□□ -0.03
CSPG4P12-202ENST00000559989 TOMM70O94826 608 aa14.88□□□□□ -0.03
CSPG4P12-202ENST00000559989 AFPP02771 609 aaKnown RBP14.88□□□□□ -0.03
CSPG4P12-202ENST00000559989 CPXCR1Q8N123 301 aa14.88□□□□□ -0.03
CSPG4P12-202ENST00000559989 GANCQ8TET4 914 aa14.88□□□□□ -0.03
CSPG4P12-202ENST00000559989 CDC23Q9UJX2 597 aa14.88□□□□□ -0.03
CSPG4P12-202ENST00000559989 PCDHA12Q9UN75 941 aa14.88□□□□□ -0.03
CSPG4P12-202ENST00000559989 STAMBPL1Q96FJ0 436 aa14.88□□□□□ -0.03
CSPG4P12-202ENST00000559989 EDEM3Q9BZQ6 932 aa14.88□□□□□ -0.03
CSPG4P12-202ENST00000559989 PHF8Q9UPP1 1060 aa14.88□□□□□ -0.03
CSPG4P12-202ENST00000559989 PHLPP2Q6ZVD8 1323 aa14.88□□□□□ -0.03
CSPG4P12-202ENST00000559989 COPS2P61201 443 aa14.88□□□□□ -0.03
CSPG4P12-202ENST00000559989 HOMEZQ8IX15 550 aa14.88□□□□□ -0.03
CSPG4P12-202ENST00000559989 PIK3R5Q8WYR1 880 aa14.88□□□□□ -0.03
CSPG4P12-202ENST00000559989 THAP11Q96EK4 314 aa14.88□□□□□ -0.03
CSPG4P12-202ENST00000559989 SLC7A5P2Q9GIP4 190 aa14.88□□□□□ -0.03
CSPG4P12-202ENST00000559989 ARHGEF3Q9NR81 526 aa14.88□□□□□ -0.03
CSPG4P12-202ENST00000559989 KRT28Q7Z3Y7 464 aa14.87□□□□□ -0.03
CSPG4P12-202ENST00000559989 APLFQ8IW19 511 aaPredicted RBP14.87□□□□□ -0.03
CSPG4P12-202ENST00000559989 PA2G4Q9UQ80 394 aaKnown RBP14.87□□□□□ -0.03
CSPG4P12-202ENST00000559989 C2orf54Q08AI8 447 aa14.87□□□□□ -0.03
CSPG4P12-202ENST00000559989 CUL1Q13616 776 aa14.87□□□□□ -0.03
CSPG4P12-202ENST00000559989 TEKT3Q9BXF9 490 aa14.87□□□□□ -0.03
CSPG4P12-202ENST00000559989 RRAGDQ9NQL2 400 aaPredicted RBP14.87□□□□□ -0.03
CSPG4P12-202ENST00000559989 KIAA1468Q9P260 1216 aa14.87□□□□□ -0.03
CSPG4P12-202ENST00000559989 DDX25Q9UHL0 483 aaKnown RBP14.87□□□□□ -0.03
CSPG4P12-202ENST00000559989 CHUKO15111 745 aa14.87□□□□□ -0.03
CSPG4P12-202ENST00000559989 ANXA13P27216 316 aa14.87□□□□□ -0.03
CSPG4P12-202ENST00000559989 RBM6P78332 1123 aaKnown RBP14.87□□□□□ -0.03
CSPG4P12-202ENST00000559989 TMPRSS15P98073 1019 aa14.87□□□□□ -0.03
CSPG4P12-202ENST00000559989 RBBP7Q16576 425 aa14.87□□□□□ -0.03
CSPG4P12-202ENST00000559989 EXOC8Q8IYI6 725 aa14.87□□□□□ -0.03
CSPG4P12-202ENST00000559989 ZNF653Q96CK0 615 aa14.87□□□□□ -0.03
CSPG4P12-202ENST00000559989 NT5C1BQ96P26 610 aa14.87□□□□□ -0.03
CSPG4P12-202ENST00000559989 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.87□□□□□ -0.03
CSPG4P12-202ENST00000559989 ARMT1Q9H993 441 aa14.87□□□□□ -0.03
CSPG4P12-202ENST00000559989 GTSE1Q9NYZ3 720 aa14.87□□□□□ -0.03
CSPG4P12-202ENST00000559989 CFTRP13569 1480 aa14.87□□□□□ -0.03
CSPG4P12-202ENST00000559989 TESPA1A2RU30 521 aaPredicted RBP14.87□□□□□ -0.03
CSPG4P12-202ENST00000559989 TFAP4Q01664 338 aa14.87□□□□□ -0.03
CSPG4P12-202ENST00000559989 ANKS3Q6ZW76 656 aa14.87□□□□□ -0.03
CSPG4P12-202ENST00000559989 TTC30BQ8N4P2 665 aa14.87□□□□□ -0.03
CSPG4P12-202ENST00000559989 PPP1R13BQ96KQ4 1090 aa14.87□□□□□ -0.03
CSPG4P12-202ENST00000559989 BRIP1Q9BX63 1249 aa14.87□□□□□ -0.03
CSPG4P12-202ENST00000559989 C6orf203Q9P0P8 240 aaPredicted RBP14.87□□□□□ -0.03
CSPG4P12-202ENST00000559989 SERTAD1Q9UHV2 236 aa14.87□□□□□ -0.03
CSPG4P12-202ENST00000559989 COPB1P53618 953 aaKnown RBP14.87□□□□□ -0.03
CSPG4P12-202ENST00000559989 LSG1Q9H089 658 aaKnown RBP14.87□□□□□ -0.03
CSPG4P12-202ENST00000559989 MAGEF1Q9HAY2 307 aa14.87□□□□□ -0.03
CSPG4P12-202ENST00000559989 TROQ12816 1431 aaPredicted RBP14.86□□□□□ -0.03
CSPG4P12-202ENST00000559989 SUPT3HO75486 399 aa14.86□□□□□ -0.03
CSPG4P12-202ENST00000559989 TECP42680 631 aa14.86□□□□□ -0.03
CSPG4P12-202ENST00000559989 PARVGQ9HBI0 331 aa14.86□□□□□ -0.03
CSPG4P12-202ENST00000559989 EML4Q9HC35 981 aaKnown RBP14.86□□□□□ -0.03
CSPG4P12-202ENST00000559989 EMILIN1Q9Y6C2 1016 aa14.86□□□□□ -0.03
CSPG4P12-202ENST00000559989 PRPSAP2O60256 369 aa14.86□□□□□ -0.03
CSPG4P12-202ENST00000559989 RASSF9O75901 435 aa14.86□□□□□ -0.03
CSPG4P12-202ENST00000559989 SERPINB1P30740 379 aa14.86□□□□□ -0.03
CSPG4P12-202ENST00000559989 C1orf228Q6PIY5 440 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms