RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 SMIM10L2BP0DMW5 78 aa14.43□□□□□ -0.1
SNX1-209ENST00000559961 RXRAP19793 462 aa14.43□□□□□ -0.1
SNX1-209ENST00000559961 MRPS9P82933 396 aaKnown RBP14.43□□□□□ -0.1
SNX1-209ENST00000559961 ZNF618Q5T7W0 954 aa14.43□□□□□ -0.1
SNX1-209ENST00000559961 SRBD1Q8N5C6 995 aaKnown RBP14.43□□□□□ -0.1
SNX1-209ENST00000559961 ARNTL2Q8WYA1 636 aa14.43□□□□□ -0.1
SNX1-209ENST00000559961 SEPT8Q92599 483 aa14.43□□□□□ -0.1
SNX1-209ENST00000559961 GPRASP2Q96D09 838 aa14.43□□□□□ -0.1
SNX1-209ENST00000559961 RAD9AQ99638 391 aa14.43□□□□□ -0.1
SNX1-209ENST00000559961 C16orf70Q9BSU1 422 aa14.43□□□□□ -0.1
SNX1-209ENST00000559961 GLT8D2Q9H1C3 349 aa14.43□□□□□ -0.1
SNX1-209ENST00000559961 CCDC196A0A1B0GTZ2 297 aa14.42□□□□□ -0.1
SNX1-209ENST00000559961 ZBTB43O43298 467 aa14.42□□□□□ -0.1
SNX1-209ENST00000559961 CXCL10P02778 98 aa14.42□□□□□ -0.1
SNX1-209ENST00000559961 WDR5P61964 334 aaKnown RBP14.42□□□□□ -0.1
SNX1-209ENST00000559961 SLC35G1Q2M3R5 365 aa14.42□□□□□ -0.1
SNX1-209ENST00000559961 DHX32Q7L7V1 743 aaKnown RBP14.42□□□□□ -0.1
SNX1-209ENST00000559961 SERINC5Q86VE9 423 aa14.42□□□□□ -0.1
SNX1-209ENST00000559961 SGMS1Q86VZ5 419 aa14.42□□□□□ -0.1
SNX1-209ENST00000559961 TEX2Q8IWB9 1127 aa14.42□□□□□ -0.1
SNX1-209ENST00000559961 CMTR1Q8N1G2 835 aaKnown RBP14.42□□□□□ -0.1
SNX1-209ENST00000559961 GLG1Q92896 1179 aa14.42□□□□□ -0.1
SNX1-209ENST00000559961 GPR20Q99678 358 aa14.42□□□□□ -0.1
SNX1-209ENST00000559961 LRRC2Q9BYS8 371 aa14.42□□□□□ -0.1
SNX1-209ENST00000559961 CERS4Q9HA82 394 aa14.42□□□□□ -0.1
SNX1-209ENST00000559961 LCTP09848 1927 aa14.42□□□□□ -0.1
SNX1-209ENST00000559961 FRMPD4Q14CM0 1322 aa14.41□□□□□ -0.1
SNX1-209ENST00000559961 COL6A3P12111 3177 aa14.41□□□□□ -0.1
SNX1-209ENST00000559961 MEIS2O14770 477 aa14.41□□□□□ -0.1
SNX1-209ENST00000559961 NBNO60934 754 aa14.41□□□□□ -0.1
SNX1-209ENST00000559961 FOSP01100 380 aaPredicted RBP14.41□□□□□ -0.1
SNX1-209ENST00000559961 ZNF76P36508 570 aa14.41□□□□□ -0.1
SNX1-209ENST00000559961 NAPAP54920 295 aa14.41□□□□□ -0.1
SNX1-209ENST00000559961 ARHGAP4P98171 946 aa14.41□□□□□ -0.1
SNX1-209ENST00000559961 ZNF200P98182 395 aaPredicted RBP14.41□□□□□ -0.1
SNX1-209ENST00000559961 MTMR1Q13613 665 aa14.41□□□□□ -0.1
SNX1-209ENST00000559961 ADGRE1Q14246 886 aa14.41□□□□□ -0.1
SNX1-209ENST00000559961 RTN1Q16799 776 aa14.41□□□□□ -0.1
SNX1-209ENST00000559961 TMTC3Q6ZXV5 915 aa14.41□□□□□ -0.1
SNX1-209ENST00000559961 RAB11FIP4Q86YS3 637 aa14.41□□□□□ -0.1
SNX1-209ENST00000559961 USP38Q8NB14 1042 aa14.41□□□□□ -0.1
SNX1-209ENST00000559961 SEPT1Q8WYJ6 367 aa14.41□□□□□ -0.1
SNX1-209ENST00000559961 DHX38Q92620 1227 aaKnown RBP14.41□□□□□ -0.1
SNX1-209ENST00000559961 GPKOWQ92917 476 aaPredicted RBP eCLIP14.41□□□□□ -0.1
SNX1-209ENST00000559961 RNPEPQ9H4A4 650 aa14.41□□□□□ -0.1
SNX1-209ENST00000559961 AZI2Q9H6S1 392 aa14.41□□□□□ -0.1
SNX1-209ENST00000559961 NRCAMQ92823 1304 aa14.41□□□□□ -0.1
SNX1-209ENST00000559961 SCN10AQ9Y5Y9 1956 aa14.4□□□□□ -0.1
SNX1-209ENST00000559961 hCG_1984214I3L0E3 225 aa14.4□□□□□ -0.1
SNX1-209ENST00000559961 RPLP2P05387 115 aaKnown RBP14.4□□□□□ -0.1
SNX1-209ENST00000559961 AKAP17AQ02040 695 aaKnown RBP14.4□□□□□ -0.1
SNX1-209ENST00000559961 TAP1Q03518 808 aa14.4□□□□□ -0.1
SNX1-209ENST00000559961 ZNF713Q8N859 430 aaPredicted RBP14.4□□□□□ -0.1
SNX1-209ENST00000559961 APBB2Q92870 758 aa14.4□□□□□ -0.1
SNX1-209ENST00000559961 VWCEQ96DN2 955 aa14.4□□□□□ -0.1
SNX1-209ENST00000559961 ASB2Q96Q27 587 aa14.4□□□□□ -0.1
SNX1-209ENST00000559961 SDF4Q9BRK5 362 aa14.4□□□□□ -0.1
SNX1-209ENST00000559961 SMARCAD1Q9H4L7 1026 aa14.4□□□□□ -0.1
SNX1-209ENST00000559961 SETD4Q9NVD3 440 aa14.4□□□□□ -0.1
SNX1-209ENST00000559961 ERAP1Q9NZ08 941 aa14.4□□□□□ -0.1
SNX1-209ENST00000559961 PCDHA6Q9UN73 950 aa14.4□□□□□ -0.1
SNX1-209ENST00000559961 INSL6Q9Y581 213 aa14.4□□□□□ -0.1
SNX1-209ENST00000559961 PCDHA8Q9Y5H6 950 aa14.4□□□□□ -0.1
SNX1-209ENST00000559961 hCG_1642624A0A1W2PR95 340 aa14.39□□□□□ -0.11
SNX1-209ENST00000559961 GOLGA8AA7E2F4 631 aa14.39□□□□□ -0.11
SNX1-209ENST00000559961 GOLGA8BA8MQT2 603 aa14.39□□□□□ -0.11
SNX1-209ENST00000559961 TREHO43280 583 aa14.39□□□□□ -0.11
SNX1-209ENST00000559961 GJB5O95377 273 aa14.39□□□□□ -0.11
SNX1-209ENST00000559961 TCF7P36402 384 aaPredicted RBP14.39□□□□□ -0.11
SNX1-209ENST00000559961 ADCY7P51828 1080 aa14.39□□□□□ -0.11
SNX1-209ENST00000559961 PPP1R18Q6NYC8 613 aa14.39□□□□□ -0.11
SNX1-209ENST00000559961 FAM117BQ6P1L5 589 aa14.39□□□□□ -0.11
SNX1-209ENST00000559961 TAF2Q6P1X5 1199 aa14.39□□□□□ -0.11
SNX1-209ENST00000559961 MYOCDQ8IZQ8 938 aa14.39□□□□□ -0.11
SNX1-209ENST00000559961 DBF4BQ8NFT6 615 aa14.39□□□□□ -0.11
SNX1-209ENST00000559961 CCDC12Q8WUD4 166 aaPredicted RBP14.39□□□□□ -0.11
SNX1-209ENST00000559961 CCDC136Q96JN2 1154 aa14.39□□□□□ -0.11
SNX1-209ENST00000559961 TGS1Q96RS0 853 aaKnown RBP14.39□□□□□ -0.11
SNX1-209ENST00000559961 CTAGE1Q96RT6 745 aa14.39□□□□□ -0.11
SNX1-209ENST00000559961 PKD2L1Q9P0L9 805 aa14.39□□□□□ -0.11
SNX1-209ENST00000559961 V9GY48 417 aaPredicted RBP14.39□□□□□ -0.11
SNX1-209ENST00000559961 M0QZ92 97 aa14.38□□□□□ -0.11
SNX1-209ENST00000559961 CTSHP09668 335 aa14.38□□□□□ -0.11
SNX1-209ENST00000559961 POU3F3P20264 500 aaPredicted RBP14.38□□□□□ -0.11
SNX1-209ENST00000559961 PPFIA1Q13136 1202 aa14.38□□□□□ -0.11
SNX1-209ENST00000559961 UBE2SQ16763 222 aa14.38□□□□□ -0.11
SNX1-209ENST00000559961 TRIM71Q2Q1W2 868 aaKnown RBP14.38□□□□□ -0.11
SNX1-209ENST00000559961 MCTP2Q6DN12 878 aa14.38□□□□□ -0.11
SNX1-209ENST00000559961 APOA5Q6Q788 366 aa14.38□□□□□ -0.11
SNX1-209ENST00000559961 RIC8AQ9NPQ8 531 aa14.38□□□□□ -0.11
SNX1-209ENST00000559961 JADE2Q9NQC1 790 aa14.38□□□□□ -0.11
SNX1-209ENST00000559961 LMCD1Q9NZU5 365 aa14.38□□□□□ -0.11
SNX1-209ENST00000559961 TCEAL9Q9UHQ7 104 aa14.38□□□□□ -0.11
SNX1-209ENST00000559961 COG5Q9UP83 839 aa14.38□□□□□ -0.11
SNX1-209ENST00000559961 KLF18A0A0U1RQI7 1052 aa14.37□□□□□ -0.11
SNX1-209ENST00000559961 SMCO2A6NFE2 343 aa14.37□□□□□ -0.11
SNX1-209ENST00000559961 RRN3P2A6NIE6 340 aa14.37□□□□□ -0.11
SNX1-209ENST00000559961 TNFRSF10AO00220 468 aa14.37□□□□□ -0.11
SNX1-209ENST00000559961 RFXAPO00287 272 aa14.37□□□□□ -0.11
SNX1-209ENST00000559961 PSMA5P28066 241 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms