RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 FAM184AQ8NB25 1140 aa6.02□□□□□ -1.45
SPG11-220ENST00000559933 RASGRP4Q8TDF6 673 aa6.02□□□□□ -1.45
SPG11-220ENST00000559933 BRI3BPQ8WY22 251 aa6.02□□□□□ -1.45
SPG11-220ENST00000559933 INTS4Q96HW7 963 aaKnown RBP6.02□□□□□ -1.45
SPG11-220ENST00000559933 PGBD1Q96JS3 809 aa6.02□□□□□ -1.45
SPG11-220ENST00000559933 C12orf42Q96LP6 360 aa6.02□□□□□ -1.45
SPG11-220ENST00000559933 LLPHQ9BRT6 129 aaKnown RBP6.02□□□□□ -1.45
SPG11-220ENST00000559933 SPZ1Q9BXG8 430 aa6.02□□□□□ -1.45
SPG11-220ENST00000559933 SH2D4AQ9H788 454 aa6.02□□□□□ -1.45
SPG11-220ENST00000559933 RAVER2Q9HCJ3 691 aaKnown RBP6.02□□□□□ -1.45
SPG11-220ENST00000559933 GINM1Q9NU53 330 aa6.02□□□□□ -1.45
SPG11-220ENST00000559933 DNAAF2Q9NVR5 837 aaKnown RBP6.02□□□□□ -1.45
SPG11-220ENST00000559933 TMOD4Q9NZQ9 345 aa6.02□□□□□ -1.45
SPG11-220ENST00000559933 ZNF232Q9UNY5 417 aa6.02□□□□□ -1.45
SPG11-220ENST00000559933 KCNH4Q9UQ05 1017 aa6.02□□□□□ -1.45
SPG11-220ENST00000559933 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.02□□□□□ -1.45
SPG11-220ENST00000559933 ZNF536O15090 1300 aa6.01□□□□□ -1.45
SPG11-220ENST00000559933 STK36Q9NRP7 1315 aa6.01□□□□□ -1.45
SPG11-220ENST00000559933 CCDC196A0A1B0GTZ2 297 aa6.01□□□□□ -1.45
SPG11-220ENST00000559933 TMEM88BA6NKF7 163 aa6.01□□□□□ -1.45
SPG11-220ENST00000559933 FAM155AB1AL88 458 aaPredicted RBP6.01□□□□□ -1.45
SPG11-220ENST00000559933 IGF2BP3O00425 579 aaKnown RBP eCLIP6.01□□□□□ -1.45
SPG11-220ENST00000559933 WDR46O15213 610 aaKnown RBP6.01□□□□□ -1.45
SPG11-220ENST00000559933 PRPF3O43395 683 aaKnown RBP6.01□□□□□ -1.45
SPG11-220ENST00000559933 OIP5O43482 229 aa6.01□□□□□ -1.45
SPG11-220ENST00000559933 BNIP3LO60238 219 aa6.01□□□□□ -1.45
SPG11-220ENST00000559933 CNMDO75829 334 aa6.01□□□□□ -1.45
SPG11-220ENST00000559933 CDKL5O76039 1030 aa6.01□□□□□ -1.45
SPG11-220ENST00000559933 CYP2C8P10632 490 aa6.01□□□□□ -1.45
SPG11-220ENST00000559933 SCG2P13521 617 aa6.01□□□□□ -1.45
SPG11-220ENST00000559933 ATP4AP20648 1035 aa6.01□□□□□ -1.45
SPG11-220ENST00000559933 AMPD1P23109 780 aa6.01□□□□□ -1.45
SPG11-220ENST00000559933 FKBP1BP68106 108 aa6.01□□□□□ -1.45
SPG11-220ENST00000559933 NPY5RQ15761 445 aa6.01□□□□□ -1.45
SPG11-220ENST00000559933 UBE2SQ16763 222 aa6.01□□□□□ -1.45
SPG11-220ENST00000559933 PFKFB3Q16875 520 aaPredicted RBP6.01□□□□□ -1.45
SPG11-220ENST00000559933 EARS2Q5JPH6 523 aaKnown RBP6.01□□□□□ -1.45
SPG11-220ENST00000559933 GPATCH4Q5T3I0 446 aaKnown RBP6.01□□□□□ -1.45
SPG11-220ENST00000559933 KRT40Q6A162 431 aa6.01□□□□□ -1.45
SPG11-220ENST00000559933 RGMBQ6NW40 437 aa6.01□□□□□ -1.45
SPG11-220ENST00000559933 KCTD17Q8N5Z5 321 aa6.01□□□□□ -1.45
SPG11-220ENST00000559933 GOLGA6L1Q8N7Z2 621 aa6.01□□□□□ -1.45
SPG11-220ENST00000559933 REPS2Q8NFH8 660 aa6.01□□□□□ -1.45
SPG11-220ENST00000559933 RRP36Q96EU6 259 aaKnown RBP6.01□□□□□ -1.45
SPG11-220ENST00000559933 C8orf76Q96K31 380 aa6.01□□□□□ -1.45
SPG11-220ENST00000559933 MAP3K14Q99558 947 aa6.01□□□□□ -1.45
SPG11-220ENST00000559933 PTPN18Q99952 460 aa6.01□□□□□ -1.45
SPG11-220ENST00000559933 SLF1Q9BQI6 1058 aa6.01□□□□□ -1.45
SPG11-220ENST00000559933 RNF26Q9BY78 433 aaPredicted RBP6.01□□□□□ -1.45
SPG11-220ENST00000559933 FTOQ9C0B1 505 aaKnown RBP eCLIP6.01□□□□□ -1.45
SPG11-220ENST00000559933 ZCCHC2Q9C0B9 1178 aaKnown RBP6.01□□□□□ -1.45
SPG11-220ENST00000559933 RIOX1Q9H6W3 641 aa6.01□□□□□ -1.45
SPG11-220ENST00000559933 HOMER2Q9NSB8 354 aa6.01□□□□□ -1.45
SPG11-220ENST00000559933 TMEM260Q9NX78 707 aa6.01□□□□□ -1.45
SPG11-220ENST00000559933 SCHIP1Q9P0W5 487 aaPredicted RBP6.01□□□□□ -1.45
SPG11-220ENST00000559933 PPP1R9AQ9ULJ8 1098 aa6.01□□□□□ -1.45
SPG11-220ENST00000559933 MTMR6Q9Y217 621 aa6.01□□□□□ -1.45
SPG11-220ENST00000559933 ZSWIM8A7E2V4 1837 aa6.01□□□□□ -1.45
SPG11-220ENST00000559933 PCNTO95613 3336 aa6□□□□□ -1.45
SPG11-220ENST00000559933 MYH15Q9Y2K3 1946 aa6□□□□□ -1.45
SPG11-220ENST00000559933 C19orf81C9J6K1 198 aa6□□□□□ -1.45
SPG11-220ENST00000559933 PDHXO00330 501 aa6□□□□□ -1.45
SPG11-220ENST00000559933 CXCL11O14625 94 aa6□□□□□ -1.45
SPG11-220ENST00000559933 OPLAHO14841 1288 aa6□□□□□ -1.45
SPG11-220ENST00000559933 KHNYNO15037 678 aaKnown RBP6□□□□□ -1.45
SPG11-220ENST00000559933 ZBTB5O15062 677 aa6□□□□□ -1.45
SPG11-220ENST00000559933 STX6O43752 255 aa6□□□□□ -1.45
SPG11-220ENST00000559933 DEXIO95424 95 aa6□□□□□ -1.45
SPG11-220ENST00000559933 THBS1P07996 1170 aa6□□□□□ -1.45
SPG11-220ENST00000559933 USP14P54578 494 aa6□□□□□ -1.45
SPG11-220ENST00000559933 NAPAP54920 295 aa6□□□□□ -1.45
SPG11-220ENST00000559933 HMGN5P82970 282 aaKnown RBP6□□□□□ -1.45
SPG11-220ENST00000559933 AKAP17AQ02040 695 aaKnown RBP6□□□□□ -1.45
SPG11-220ENST00000559933 RESTQ13127 1097 aa6□□□□□ -1.45
SPG11-220ENST00000559933 SNAPC2Q13487 334 aa6□□□□□ -1.45
SPG11-220ENST00000559933 TMEM132BQ14DG7 1078 aa6□□□□□ -1.45
SPG11-220ENST00000559933 MUM1L1Q5H9M0 696 aa6□□□□□ -1.45
SPG11-220ENST00000559933 COL13A1Q5TAT6 717 aaPredicted RBP6□□□□□ -1.45
SPG11-220ENST00000559933 LARP1BQ659C4 914 aaKnown RBP6□□□□□ -1.45
SPG11-220ENST00000559933 CPLX2Q6PUV4 134 aaKnown RBP6□□□□□ -1.45
SPG11-220ENST00000559933 BTNL9Q6UXG8 535 aa6□□□□□ -1.45
SPG11-220ENST00000559933 CATSPERGQ6ZRH7 1159 aa6□□□□□ -1.45
SPG11-220ENST00000559933 SLC9A9Q8IVB4 645 aa6□□□□□ -1.45
SPG11-220ENST00000559933 TNS4Q8IZW8 715 aa6□□□□□ -1.45
SPG11-220ENST00000559933 CPXCR1Q8N123 301 aa6□□□□□ -1.45
SPG11-220ENST00000559933 GALNT6Q8NCL4 622 aa6□□□□□ -1.45
SPG11-220ENST00000559933 ADAMTS19Q8TE59 1207 aa6□□□□□ -1.45
SPG11-220ENST00000559933 TBC1D5Q92609 795 aa6□□□□□ -1.45
SPG11-220ENST00000559933 LPAR1Q92633 364 aa6□□□□□ -1.45
SPG11-220ENST00000559933 GLMNQ92990 594 aa6□□□□□ -1.45
SPG11-220ENST00000559933 MTMR8Q96EF0 704 aa6□□□□□ -1.45
SPG11-220ENST00000559933 CALR3Q96L12 384 aaKnown RBP6□□□□□ -1.45
SPG11-220ENST00000559933 P2RX7Q99572 595 aaKnown RBP6□□□□□ -1.45
SPG11-220ENST00000559933 PAGR1Q9BTK6 254 aa6□□□□□ -1.45
SPG11-220ENST00000559933 ASCC2Q9H1I8 757 aaPredicted RBP6□□□□□ -1.45
SPG11-220ENST00000559933 RANBP17Q9H2T7 1088 aaKnown RBP6□□□□□ -1.45
SPG11-220ENST00000559933 TXNRD2Q9NNW7 524 aa6□□□□□ -1.45
SPG11-220ENST00000559933 BTBD7Q9P203 1132 aa6□□□□□ -1.45
SPG11-220ENST00000559933 SEC63Q9UGP8 760 aaKnown RBP6□□□□□ -1.45
SPG11-220ENST00000559933 FEM1BQ9UK73 627 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms