RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 UBA1P22314 1058 aaKnown RBP16.21■□□□□ 0.19
SMAD6-204ENST00000559931 KRT85P78386 507 aa16.21■□□□□ 0.19
SMAD6-204ENST00000559931 SP4Q02446 784 aa16.21■□□□□ 0.19
SMAD6-204ENST00000559931 TMEM63BQ5T3F8 832 aa16.21■□□□□ 0.19
SMAD6-204ENST00000559931 GJC2Q5T442 439 aaPredicted RBP16.21■□□□□ 0.19
SMAD6-204ENST00000559931 LRCH2Q5VUJ6 765 aa16.21■□□□□ 0.19
SMAD6-204ENST00000559931 CYFIP1Q7L576 1253 aa16.21■□□□□ 0.19
SMAD6-204ENST00000559931 COPS5Q92905 334 aa16.21■□□□□ 0.19
SMAD6-204ENST00000559931 ARMC5Q96C12 935 aa16.21■□□□□ 0.19
SMAD6-204ENST00000559931 SENP7Q9BQF6 1050 aa16.21■□□□□ 0.19
SMAD6-204ENST00000559931 TEKT3Q9BXF9 490 aa16.21■□□□□ 0.19
SMAD6-204ENST00000559931 RNF208Q9H0X6 261 aa16.21■□□□□ 0.19
SMAD6-204ENST00000559931 UNC93B1Q9H1C4 597 aa16.21■□□□□ 0.19
SMAD6-204ENST00000559931 TMEM60Q9H2L4 133 aa16.21■□□□□ 0.19
SMAD6-204ENST00000559931 LAD1O00515 517 aa16.2■□□□□ 0.18
SMAD6-204ENST00000559931 CCL5P13501 91 aa16.2■□□□□ 0.18
SMAD6-204ENST00000559931 KCNA2P16389 499 aa16.2■□□□□ 0.18
SMAD6-204ENST00000559931 LAMC2Q13753 1193 aa16.2■□□□□ 0.18
SMAD6-204ENST00000559931 MTFR1Q15390 333 aa16.2■□□□□ 0.18
SMAD6-204ENST00000559931 CELF3Q5SZQ8 465 aaKnown RBP16.2■□□□□ 0.18
SMAD6-204ENST00000559931 OR6J1Q8NGC5 347 aa16.2■□□□□ 0.18
SMAD6-204ENST00000559931 SLC5A5Q92911 643 aa16.2■□□□□ 0.18
SMAD6-204ENST00000559931 LENG1Q96BZ8 264 aaPredicted RBP16.2■□□□□ 0.18
SMAD6-204ENST00000559931 ZNF333Q96JL9 665 aa16.2■□□□□ 0.18
SMAD6-204ENST00000559931 RIT2Q99578 217 aa16.2■□□□□ 0.18
SMAD6-204ENST00000559931 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.2■□□□□ 0.18
SMAD6-204ENST00000559931 SPC25Q9HBM1 224 aa16.2■□□□□ 0.18
SMAD6-204ENST00000559931 KCNMB3Q9NPA1 279 aa16.2■□□□□ 0.18
SMAD6-204ENST00000559931 DDX20Q9UHI6 824 aaKnown RBP16.2■□□□□ 0.18
SMAD6-204ENST00000559931 PCDHA12Q9UN75 941 aa16.2■□□□□ 0.18
SMAD6-204ENST00000559931 NOP56O00567 594 aaKnown RBP16.19■□□□□ 0.18
SMAD6-204ENST00000559931 MSCO60682 206 aa16.19■□□□□ 0.18
SMAD6-204ENST00000559931 DUSP11O75319 330 aaKnown RBP16.19■□□□□ 0.18
SMAD6-204ENST00000559931 MARCKSP29966 332 aaPredicted RBP16.19■□□□□ 0.18
SMAD6-204ENST00000559931 ITGB3BPQ13352 177 aaPredicted RBP16.19■□□□□ 0.18
SMAD6-204ENST00000559931 TMEM266Q2M3C6 531 aa16.19■□□□□ 0.18
SMAD6-204ENST00000559931 DTHD1Q6ZMT9 781 aa16.19■□□□□ 0.18
SMAD6-204ENST00000559931 C4orf32Q8N8J7 132 aa16.19■□□□□ 0.18
SMAD6-204ENST00000559931 ETNPPLQ8TBG4 499 aa16.19■□□□□ 0.18
SMAD6-204ENST00000559931 HAS1Q92839 578 aa16.19■□□□□ 0.18
SMAD6-204ENST00000559931 CHAMP1Q96JM3 812 aa16.19■□□□□ 0.18
SMAD6-204ENST00000559931 SPATA33Q96N06 139 aa16.19■□□□□ 0.18
SMAD6-204ENST00000559931 BCAS3Q9H6U6 928 aa16.19■□□□□ 0.18
SMAD6-204ENST00000559931 TTC12Q9H892 705 aaPredicted RBP16.19■□□□□ 0.18
SMAD6-204ENST00000559931 JPH1Q9HDC5 661 aaPredicted RBP16.19■□□□□ 0.18
SMAD6-204ENST00000559931 POLR3EQ9NVU0 708 aa16.19■□□□□ 0.18
SMAD6-204ENST00000559931 SLC9A2Q9UBY0 812 aa16.19■□□□□ 0.18
SMAD6-204ENST00000559931 SAMM50Q9Y512 469 aa16.19■□□□□ 0.18
SMAD6-204ENST00000559931 NFASCO94856 1347 aa16.19■□□□□ 0.18
SMAD6-204ENST00000559931 ADCY6O43306 1168 aa16.18■□□□□ 0.18
SMAD6-204ENST00000559931 CHMP2AO43633 222 aa16.18■□□□□ 0.18
SMAD6-204ENST00000559931 PTGS1P23219 599 aa16.18■□□□□ 0.18
SMAD6-204ENST00000559931 TECP42680 631 aa16.18■□□□□ 0.18
SMAD6-204ENST00000559931 ATP2C1P98194 919 aaPredicted RBP16.18■□□□□ 0.18
SMAD6-204ENST00000559931 SLC39A14Q15043 492 aa16.18■□□□□ 0.18
SMAD6-204ENST00000559931 BRDTQ58F21 947 aaPredicted RBP16.18■□□□□ 0.18
SMAD6-204ENST00000559931 METTL7BQ6UX53 244 aa16.18■□□□□ 0.18
SMAD6-204ENST00000559931 TLK2Q86UE8 772 aa16.18■□□□□ 0.18
SMAD6-204ENST00000559931 TNPO1Q92973 898 aaKnown RBP16.18■□□□□ 0.18
SMAD6-204ENST00000559931 DEFB118Q96PH6 123 aa16.18■□□□□ 0.18
SMAD6-204ENST00000559931 MTMR9Q96QG7 549 aa16.18■□□□□ 0.18
SMAD6-204ENST00000559931 XPNPEP3Q9NQH7 507 aa16.18■□□□□ 0.18
SMAD6-204ENST00000559931 GNEQ9Y223 722 aaKnown RBP16.18■□□□□ 0.18
SMAD6-204ENST00000559931 Q9Y3F1 56 aa16.18■□□□□ 0.18
SMAD6-204ENST00000559931 VWA3AA6NCI4 1184 aa16.17■□□□□ 0.18
SMAD6-204ENST00000559931 SPTLC2O15270 562 aa16.17■□□□□ 0.18
SMAD6-204ENST00000559931 DHX15O43143 795 aaKnown RBP16.17■□□□□ 0.18
SMAD6-204ENST00000559931 PSMD10O75832 226 aa16.17■□□□□ 0.18
SMAD6-204ENST00000559931 FARP2O94887 1054 aaPredicted RBP16.17■□□□□ 0.18
SMAD6-204ENST00000559931 C6orf222P0C671 652 aaPredicted RBP16.17■□□□□ 0.18
SMAD6-204ENST00000559931 PRPHP41219 470 aa16.17■□□□□ 0.18
SMAD6-204ENST00000559931 NASPP49321 788 aaPredicted RBP16.17■□□□□ 0.18
SMAD6-204ENST00000559931 SOX10P56693 466 aa16.17■□□□□ 0.18
SMAD6-204ENST00000559931 KRT76Q01546 638 aa16.17■□□□□ 0.18
SMAD6-204ENST00000559931 ARHGAP1Q07960 439 aa16.17■□□□□ 0.18
SMAD6-204ENST00000559931 PTPAQ15257 358 aa16.17■□□□□ 0.18
SMAD6-204ENST00000559931 ARL6IP4Q66PJ3 421 aaKnown RBP16.17■□□□□ 0.18
SMAD6-204ENST00000559931 NCAPH2Q6IBW4 605 aa16.17■□□□□ 0.18
SMAD6-204ENST00000559931 AFG1LQ8WV93 481 aa16.17■□□□□ 0.18
SMAD6-204ENST00000559931 SPATA32Q96LK8 384 aa16.17■□□□□ 0.18
SMAD6-204ENST00000559931 TMEM106CQ9BVX2 250 aa16.17■□□□□ 0.18
SMAD6-204ENST00000559931 RAB34Q9BZG1 259 aa16.17■□□□□ 0.18
SMAD6-204ENST00000559931 SCAND2PQ9GZW5 306 aaPredicted RBP16.17■□□□□ 0.18
SMAD6-204ENST00000559931 YEATS4O95619 227 aa16.16■□□□□ 0.18
SMAD6-204ENST00000559931 PGK1P00558 417 aa16.16■□□□□ 0.18
SMAD6-204ENST00000559931 ME1P48163 572 aa16.16■□□□□ 0.18
SMAD6-204ENST00000559931 TPRNQ4KMQ1 711 aa16.16■□□□□ 0.18
SMAD6-204ENST00000559931 GNASQ5JWF2 1037 aa16.16■□□□□ 0.18
SMAD6-204ENST00000559931 MIER3Q7Z3K6 550 aa16.16■□□□□ 0.18
SMAD6-204ENST00000559931 LINC00301Q8NCQ3 95 aa16.16■□□□□ 0.18
SMAD6-204ENST00000559931 FERMT2Q96AC1 680 aa16.16■□□□□ 0.18
SMAD6-204ENST00000559931 UNC45AQ9H3U1 944 aa16.16■□□□□ 0.18
SMAD6-204ENST00000559931 ZEB2O60315 1214 aa16.15■□□□□ 0.18
SMAD6-204ENST00000559931 TFRCP02786 760 aaKnown RBP16.15■□□□□ 0.18
SMAD6-204ENST00000559931 CPT1AP50416 773 aa16.15■□□□□ 0.18
SMAD6-204ENST00000559931 ACTR2P61160 394 aa16.15■□□□□ 0.18
SMAD6-204ENST00000559931 BEX3Q00994 111 aa16.15■□□□□ 0.18
SMAD6-204ENST00000559931 FSCN1Q16658 493 aaKnown RBP16.15■□□□□ 0.18
SMAD6-204ENST00000559931 HSDL1Q3SXM5 330 aa16.15■□□□□ 0.18
SMAD6-204ENST00000559931 ZNF746Q6NUN9 644 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms