RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 STX17P56962 302 aa19.91■□□□□ 0.78
SNX1-208ENST00000559844 FAM110CQ1W6H9 321 aa19.91■□□□□ 0.78
SNX1-208ENST00000559844 Q3C1V9 767 aa19.91■□□□□ 0.78
SNX1-208ENST00000559844 CDKAL1Q5VV42 579 aa19.91■□□□□ 0.78
SNX1-208ENST00000559844 ARMCX5Q6P1M9 558 aa19.91■□□□□ 0.78
SNX1-208ENST00000559844 MOXD1Q6UVY6 613 aa19.91■□□□□ 0.78
SNX1-208ENST00000559844 SMYD4Q8IYR2 804 aaPredicted RBP19.91■□□□□ 0.78
SNX1-208ENST00000559844 PLIN2Q99541 437 aa19.91■□□□□ 0.78
SNX1-208ENST00000559844 MMTAG2Q9BU76 263 aaKnown RBP19.91■□□□□ 0.78
SNX1-208ENST00000559844 R3HDMLQ9H3Y0 253 aa19.91■□□□□ 0.78
SNX1-208ENST00000559844 KCND1Q9NSA2 647 aa19.91■□□□□ 0.78
SNX1-208ENST00000559844 HOMER2Q9NSB8 354 aa19.91■□□□□ 0.78
SNX1-208ENST00000559844 ALAS1P13196 640 aa19.9■□□□□ 0.78
SNX1-208ENST00000559844 SPAG1Q07617 926 aa19.9■□□□□ 0.78
SNX1-208ENST00000559844 STIM1Q13586 685 aa19.9■□□□□ 0.78
SNX1-208ENST00000559844 KMT5BQ4FZB7 885 aa19.9■□□□□ 0.78
SNX1-208ENST00000559844 CCDC112Q8NEF3 446 aa19.9■□□□□ 0.78
SNX1-208ENST00000559844 CDK5RAP3Q96JB5 506 aa19.9■□□□□ 0.78
SNX1-208ENST00000559844 C7orf25Q9BPX7 421 aa19.9■□□□□ 0.78
SNX1-208ENST00000559844 ANO3Q9BYT9 981 aa19.9■□□□□ 0.78
SNX1-208ENST00000559844 MORF4L1Q9UBU8 362 aa19.9■□□□□ 0.78
SNX1-208ENST00000559844 RIPK3Q9Y572 518 aa19.9■□□□□ 0.78
SNX1-208ENST00000559844 RBBP6Q7Z6E9 1792 aaKnown RBP19.9■□□□□ 0.78
SNX1-208ENST00000559844 A0A1B0GTH6 734 aa19.9■□□□□ 0.78
SNX1-208ENST00000559844 MARCH6O60337 910 aa19.9■□□□□ 0.78
SNX1-208ENST00000559844 FOSP01100 380 aaPredicted RBP19.9■□□□□ 0.78
SNX1-208ENST00000559844 BCRP11274 1271 aa19.9■□□□□ 0.78
SNX1-208ENST00000559844 PPP1R2P41236 205 aa19.9■□□□□ 0.78
SNX1-208ENST00000559844 KCNJ6P48051 423 aa19.9■□□□□ 0.78
SNX1-208ENST00000559844 FILIP1LQ4L180 1135 aa19.9■□□□□ 0.78
SNX1-208ENST00000559844 KRT79Q5XKE5 535 aa19.9■□□□□ 0.78
SNX1-208ENST00000559844 C17orf99Q6UX52 265 aa19.9■□□□□ 0.78
SNX1-208ENST00000559844 PRIMPOLQ96LW4 560 aa19.9■□□□□ 0.78
SNX1-208ENST00000559844 BEGAINQ9BUH8 593 aa19.9■□□□□ 0.78
SNX1-208ENST00000559844 MOV10L1Q9BXT6 1211 aaKnown RBP19.9■□□□□ 0.78
SNX1-208ENST00000559844 INTS13Q9NVM9 706 aa19.9■□□□□ 0.78
SNX1-208ENST00000559844 PNMA2Q9UL42 364 aa19.9■□□□□ 0.78
SNX1-208ENST00000559844 SLC26A4O43511 780 aa19.89■□□□□ 0.77
SNX1-208ENST00000559844 KLRC4O43908 158 aa19.89■□□□□ 0.77
SNX1-208ENST00000559844 HSP90AA4PQ58FG1 418 aa19.89■□□□□ 0.77
SNX1-208ENST00000559844 NELFBQ8WX92 580 aa19.89■□□□□ 0.77
SNX1-208ENST00000559844 LRRC27Q9C0I9 530 aa19.89■□□□□ 0.77
SNX1-208ENST00000559844 CYP3A7-CYP3A51PA0A087WV96 503 aa19.88■□□□□ 0.77
SNX1-208ENST00000559844 CYP3A7P24462 503 aa19.88■□□□□ 0.77
SNX1-208ENST00000559844 CCNA1P78396 465 aa19.88■□□□□ 0.77
SNX1-208ENST00000559844 GRB10Q13322 594 aa19.88■□□□□ 0.77
SNX1-208ENST00000559844 NR1I3Q14994 352 aa19.88■□□□□ 0.77
SNX1-208ENST00000559844 USP17L6PQ6QN14 398 aa19.88■□□□□ 0.77
SNX1-208ENST00000559844 SV2BQ7L1I2 683 aa19.88■□□□□ 0.77
SNX1-208ENST00000559844 RIOX2Q8IUF8 465 aa19.88■□□□□ 0.77
SNX1-208ENST00000559844 ADSSL1Q8N142 457 aa19.88■□□□□ 0.77
SNX1-208ENST00000559844 ANKRD20A12PQ8NF67 263 aa19.88■□□□□ 0.77
SNX1-208ENST00000559844 CFHR5Q9BXR6 569 aa19.88■□□□□ 0.77
SNX1-208ENST00000559844 MGAMO43451 1857 aa19.88■□□□□ 0.77
SNX1-208ENST00000559844 ABCB11O95342 1321 aa19.88■□□□□ 0.77
SNX1-208ENST00000559844 MEIS2O14770 477 aa19.88■□□□□ 0.77
SNX1-208ENST00000559844 SPECC1LQ69YQ0 1117 aa19.88■□□□□ 0.77
SNX1-208ENST00000559844 NCAPG2Q86XI2 1143 aa19.88■□□□□ 0.77
SNX1-208ENST00000559844 TRERF1Q96PN7 1200 aa19.88■□□□□ 0.77
SNX1-208ENST00000559844 TRIM9Q9C026 710 aa19.88■□□□□ 0.77
SNX1-208ENST00000559844 RNF146Q9NTX7 359 aa19.88■□□□□ 0.77
SNX1-208ENST00000559844 SAGE1Q9NXZ1 904 aa19.88■□□□□ 0.77
SNX1-208ENST00000559844 PLXNB2O15031 1838 aa19.87■□□□□ 0.77
SNX1-208ENST00000559844 ERCC3P19447 782 aa19.87■□□□□ 0.77
SNX1-208ENST00000559844 PRCPP42785 496 aa19.87■□□□□ 0.77
SNX1-208ENST00000559844 GIMAP8Q8ND71 665 aaPredicted RBP19.87■□□□□ 0.77
SNX1-208ENST00000559844 SNX29Q8TEQ0 813 aa19.87■□□□□ 0.77
SNX1-208ENST00000559844 LRRC15Q8TF66 581 aa19.87■□□□□ 0.77
SNX1-208ENST00000559844 MBOAT7Q96N66 472 aa19.87■□□□□ 0.77
SNX1-208ENST00000559844 PORCNQ9H237 461 aa19.87■□□□□ 0.77
SNX1-208ENST00000559844 EXOC1Q9NV70 894 aa19.87■□□□□ 0.77
SNX1-208ENST00000559844 GDAQ9Y2T3 454 aa19.87■□□□□ 0.77
SNX1-208ENST00000559844 DOCK3Q8IZD9 2030 aa19.87■□□□□ 0.77
SNX1-208ENST00000559844 ZNFX1Q9P2E3 1918 aaKnown RBP19.87■□□□□ 0.77
SNX1-208ENST00000559844 PSMA7O14818 248 aa19.86■□□□□ 0.77
SNX1-208ENST00000559844 TBX2Q13207 712 aaPredicted RBP19.86■□□□□ 0.77
SNX1-208ENST00000559844 WDR78Q5VTH9 848 aa19.86■□□□□ 0.77
SNX1-208ENST00000559844 SLFN12Q8IYM2 578 aa19.86■□□□□ 0.77
SNX1-208ENST00000559844 HAS1Q92839 578 aa19.86■□□□□ 0.77
SNX1-208ENST00000559844 PNMA5Q96PV4 448 aa19.86■□□□□ 0.77
SNX1-208ENST00000559844 PCDHA12Q9UN75 941 aa19.86■□□□□ 0.77
SNX1-208ENST00000559844 MRPL11Q9Y3B7 192 aaKnown RBP19.86■□□□□ 0.77
SNX1-208ENST00000559844 KDM3AQ9Y4C1 1321 aa19.86■□□□□ 0.77
SNX1-208ENST00000559844 SPDYE3A6NKU9 549 aa19.86■□□□□ 0.77
SNX1-208ENST00000559844 ECM2O94769 699 aaPredicted RBP19.86■□□□□ 0.77
SNX1-208ENST00000559844 SLC25A27O95847 323 aa19.86■□□□□ 0.77
SNX1-208ENST00000559844 ASIC1P78348 528 aa19.86■□□□□ 0.77
SNX1-208ENST00000559844 TKFCQ3LXA3 575 aa19.86■□□□□ 0.77
SNX1-208ENST00000559844 MUM1L1Q5H9M0 696 aa19.86■□□□□ 0.77
SNX1-208ENST00000559844 APTXQ7Z2E3 356 aaKnown RBP19.86■□□□□ 0.77
SNX1-208ENST00000559844 DHTKD1Q96HY7 919 aaPredicted RBP19.86■□□□□ 0.77
SNX1-208ENST00000559844 EFCC1Q9HA90 598 aa19.86■□□□□ 0.77
SNX1-208ENST00000559844 WBP1LQ9NX94 342 aa19.86■□□□□ 0.77
SNX1-208ENST00000559844 LIMA1Q9UHB6 759 aaKnown RBP19.86■□□□□ 0.77
SNX1-208ENST00000559844 ZSWIM8A7E2V4 1837 aa19.85■□□□□ 0.77
SNX1-208ENST00000559844 MYH7BA7E2Y1 1941 aa19.85■□□□□ 0.77
SNX1-208ENST00000559844 POTEMA6NI47 508 aa19.85■□□□□ 0.77
SNX1-208ENST00000559844 NFIBO00712 420 aa19.85■□□□□ 0.77
SNX1-208ENST00000559844 COPB2P35606 906 aa19.85■□□□□ 0.77
SNX1-208ENST00000559844 TMEM119Q4V9L6 283 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms