RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 RAB34Q9BZG1 259 aa19.48■□□□□ 0.71
CHRNA3-206ENST00000559658 LETM1O95202 739 aaPredicted RBP19.48■□□□□ 0.71
CHRNA3-206ENST00000559658 SPATA31C1P0DKV0 1188 aa19.48■□□□□ 0.71
CHRNA3-206ENST00000559658 ADORA2AP29274 412 aa19.48■□□□□ 0.71
CHRNA3-206ENST00000559658 CCT6AP40227 531 aaKnown RBP19.48■□□□□ 0.71
CHRNA3-206ENST00000559658 CCNA1P78396 465 aa19.48■□□□□ 0.71
CHRNA3-206ENST00000559658 TMEM119Q4V9L6 283 aa19.48■□□□□ 0.71
CHRNA3-206ENST00000559658 KRT79Q5XKE5 535 aa19.48■□□□□ 0.71
CHRNA3-206ENST00000559658 GPR142Q7Z601 462 aa19.48■□□□□ 0.71
CHRNA3-206ENST00000559658 CEP57L1Q8IYX8 460 aa19.48■□□□□ 0.71
CHRNA3-206ENST00000559658 RNF214Q8ND24 703 aa19.48■□□□□ 0.71
CHRNA3-206ENST00000559658 TSPY26PQ9H489 355 aa19.48■□□□□ 0.71
CHRNA3-206ENST00000559658 RGL1Q9NZL6 768 aa19.48■□□□□ 0.71
CHRNA3-206ENST00000559658 PCDHA5Q9Y5H7 936 aa19.48■□□□□ 0.71
CHRNA3-206ENST00000559658 PPP2R5CQ13362 524 aa19.47■□□□□ 0.71
CHRNA3-206ENST00000559658 CUL4BQ13620 913 aa19.47■□□□□ 0.71
CHRNA3-206ENST00000559658 CCDC39Q9UFE4 941 aa19.47■□□□□ 0.71
CHRNA3-206ENST00000559658 SP2Q02086 613 aa19.46■□□□□ 0.71
CHRNA3-206ENST00000559658 DHX8Q14562 1220 aaKnown RBP19.46■□□□□ 0.71
CHRNA3-206ENST00000559658 C11orf57Q6ZUT1 292 aaPredicted RBP19.46■□□□□ 0.71
CHRNA3-206ENST00000559658 CATSPER3Q86XQ3 398 aa19.46■□□□□ 0.71
CHRNA3-206ENST00000559658 CAPNS2Q96L46 248 aa19.46■□□□□ 0.71
CHRNA3-206ENST00000559658 TEKT3Q9BXF9 490 aa19.46■□□□□ 0.71
CHRNA3-206ENST00000559658 MAF1Q9H063 256 aa19.46■□□□□ 0.71
CHRNA3-206ENST00000559658 WRAP73Q9P2S5 460 aaPredicted RBP19.46■□□□□ 0.71
CHRNA3-206ENST00000559658 WDR81Q562E7 1941 aa19.46■□□□□ 0.71
CHRNA3-206ENST00000559658 RASSF10A6NK89 507 aa19.45■□□□□ 0.7
CHRNA3-206ENST00000559658 TLR2O60603 784 aa19.45■□□□□ 0.7
CHRNA3-206ENST00000559658 CCNE2O96020 404 aa19.45■□□□□ 0.7
CHRNA3-206ENST00000559658 KCNA2P16389 499 aa19.45■□□□□ 0.7
CHRNA3-206ENST00000559658 PTGS1P23219 599 aa19.45■□□□□ 0.7
CHRNA3-206ENST00000559658 TM4SF4P48230 202 aa19.45■□□□□ 0.7
CHRNA3-206ENST00000559658 APLP1P51693 650 aa19.45■□□□□ 0.7
CHRNA3-206ENST00000559658 PSMC6P62333 389 aa19.45■□□□□ 0.7
CHRNA3-206ENST00000559658 SREBF2Q12772 1141 aa19.45■□□□□ 0.7
CHRNA3-206ENST00000559658 DPCR1Q3MIW9 517 aa19.45■□□□□ 0.7
CHRNA3-206ENST00000559658 XRRA1Q6P2D8 792 aa19.45■□□□□ 0.7
CHRNA3-206ENST00000559658 C17orf99Q6UX52 265 aa19.45■□□□□ 0.7
CHRNA3-206ENST00000559658 SEPT14Q6ZU15 432 aa19.45■□□□□ 0.7
CHRNA3-206ENST00000559658 GPRASP2Q96D09 838 aa19.45■□□□□ 0.7
CHRNA3-206ENST00000559658 CALML4Q96GE6 196 aa19.45■□□□□ 0.7
CHRNA3-206ENST00000559658 IWS1Q96ST2 819 aa19.45■□□□□ 0.7
CHRNA3-206ENST00000559658 ZCCHC17Q9NP64 241 aaKnown RBP19.45■□□□□ 0.7
CHRNA3-206ENST00000559658 CREBZFQ9NS37 354 aa19.45■□□□□ 0.7
CHRNA3-206ENST00000559658 TUBE1Q9UJT0 475 aa19.45■□□□□ 0.7
CHRNA3-206ENST00000559658 ZNF236Q9UL36 1845 aa19.45■□□□□ 0.7
CHRNA3-206ENST00000559658 E9PMD0 336 aa19.45■□□□□ 0.7
CHRNA3-206ENST00000559658 BMP6P22004 513 aa19.45■□□□□ 0.7
CHRNA3-206ENST00000559658 CTGFP29279 349 aa19.45■□□□□ 0.7
CHRNA3-206ENST00000559658 DPYDQ12882 1025 aa19.45■□□□□ 0.7
CHRNA3-206ENST00000559658 CTTNQ14247 550 aaKnown RBP19.45■□□□□ 0.7
CHRNA3-206ENST00000559658 MCM6Q14566 821 aa19.45■□□□□ 0.7
CHRNA3-206ENST00000559658 STXBP2Q15833 593 aa19.45■□□□□ 0.7
CHRNA3-206ENST00000559658 ANO6Q4KMQ2 910 aa19.45■□□□□ 0.7
CHRNA3-206ENST00000559658 RIT2Q99578 217 aa19.45■□□□□ 0.7
CHRNA3-206ENST00000559658 EIF2AK1Q9BQI3 630 aaKnown RBP19.45■□□□□ 0.7
CHRNA3-206ENST00000559658 DNAJC25Q9H1X3 360 aa19.45■□□□□ 0.7
CHRNA3-206ENST00000559658 KIAA1024Q9UPX6 916 aa19.45■□□□□ 0.7
CHRNA3-206ENST00000559658 CCDC192P0DO97 292 aa19.44■□□□□ 0.7
CHRNA3-206ENST00000559658 PDE4DQ08499 809 aa19.44■□□□□ 0.7
CHRNA3-206ENST00000559658 GRB14Q14449 540 aa19.44■□□□□ 0.7
CHRNA3-206ENST00000559658 DEFB115Q30KQ5 88 aa19.44■□□□□ 0.7
CHRNA3-206ENST00000559658 ZNF792Q3KQV3 632 aa19.44■□□□□ 0.7
CHRNA3-206ENST00000559658 HYIQ5T013 277 aa19.44■□□□□ 0.7
CHRNA3-206ENST00000559658 TMEM63BQ5T3F8 832 aa19.44■□□□□ 0.7
CHRNA3-206ENST00000559658 SASS6Q6UVJ0 657 aa19.44■□□□□ 0.7
CHRNA3-206ENST00000559658 FBXO16Q8IX29 292 aaPredicted RBP19.44■□□□□ 0.7
CHRNA3-206ENST00000559658 DYDC2Q96IM9 177 aa19.44■□□□□ 0.7
CHRNA3-206ENST00000559658 CDK5RAP3Q96JB5 506 aa19.44■□□□□ 0.7
CHRNA3-206ENST00000559658 KBTBD4Q9NVX7 518 aa19.44■□□□□ 0.7
CHRNA3-206ENST00000559658 ADD3Q9UEY8 706 aaKnown RBP19.44■□□□□ 0.7
CHRNA3-206ENST00000559658 MGAMO43451 1857 aa19.43■□□□□ 0.7
CHRNA3-206ENST00000559658 INHBEP58166 350 aa19.43■□□□□ 0.7
CHRNA3-206ENST00000559658 ELOA2Q8IYF1 753 aaPredicted RBP19.43■□□□□ 0.7
CHRNA3-206ENST00000559658 BANK1Q8NDB2 785 aa19.43■□□□□ 0.7
CHRNA3-206ENST00000559658 MAN1B1Q9UKM7 699 aa19.43■□□□□ 0.7
CHRNA3-206ENST00000559658 GOLGA6L3A6NEY3 463 aa19.43■□□□□ 0.7
CHRNA3-206ENST00000559658 SPATA31C2B4DYI2 1134 aa19.43■□□□□ 0.7
CHRNA3-206ENST00000559658 ZBTB39O15060 712 aa19.43■□□□□ 0.7
CHRNA3-206ENST00000559658 EIF3JO75822 258 aaKnown RBP19.43■□□□□ 0.7
CHRNA3-206ENST00000559658 ARIH2O95376 493 aa19.43■□□□□ 0.7
CHRNA3-206ENST00000559658 SP4Q02446 784 aa19.43■□□□□ 0.7
CHRNA3-206ENST00000559658 PLEKHH3Q7Z736 793 aa19.43■□□□□ 0.7
CHRNA3-206ENST00000559658 NLRX1Q86UT6 975 aa19.43■□□□□ 0.7
CHRNA3-206ENST00000559658 RAD54LQ92698 747 aa19.43■□□□□ 0.7
CHRNA3-206ENST00000559658 HSD17B14Q9BPX1 270 aa19.43■□□□□ 0.7
CHRNA3-206ENST00000559658 USP25Q9UHP3 1055 aa19.43■□□□□ 0.7
CHRNA3-206ENST00000559658 IVNS1ABPQ9Y6Y0 642 aa19.43■□□□□ 0.7
CHRNA3-206ENST00000559658 RPA1P27694 616 aa19.42■□□□□ 0.7
CHRNA3-206ENST00000559658 SARSP49591 514 aaKnown RBP19.42■□□□□ 0.7
CHRNA3-206ENST00000559658 HAUS3Q68CZ6 603 aa19.42■□□□□ 0.7
CHRNA3-206ENST00000559658 SPATA20Q8TB22 786 aa19.42■□□□□ 0.7
CHRNA3-206ENST00000559658 LARP4BQ92615 738 aaKnown RBP19.42■□□□□ 0.7
CHRNA3-206ENST00000559658 HTTP42858 3142 aa19.42■□□□□ 0.7
CHRNA3-206ENST00000559658 KDM3AQ9Y4C1 1321 aa19.41■□□□□ 0.7
CHRNA3-206ENST00000559658 SLITRK3O94933 977 aa19.41■□□□□ 0.7
CHRNA3-206ENST00000559658 UBA1P22314 1058 aaKnown RBP19.41■□□□□ 0.7
CHRNA3-206ENST00000559658 CAP1Q01518 475 aa19.41■□□□□ 0.7
CHRNA3-206ENST00000559658 NOGQ13253 232 aa19.41■□□□□ 0.7
CHRNA3-206ENST00000559658 UGCGQ16739 394 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms