RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 CIAPIN1Q6FI81 312 aa12.52□□□□□ -0.41
CLPX-204ENST00000559152 EHBP1Q8NDI1 1231 aa12.52□□□□□ -0.41
CLPX-204ENST00000559152 P2RX7Q99572 595 aaKnown RBP12.52□□□□□ -0.41
CLPX-204ENST00000559152 HAUS4Q9H6D7 363 aa12.52□□□□□ -0.41
CLPX-204ENST00000559152 CTAGE9A4FU28 777 aa12.51□□□□□ -0.41
CLPX-204ENST00000559152 MUTP22033 750 aa12.51□□□□□ -0.41
CLPX-204ENST00000559152 HOXA13P31271 388 aaPredicted RBP12.51□□□□□ -0.41
CLPX-204ENST00000559152 CXCL9Q07325 125 aa12.51□□□□□ -0.41
CLPX-204ENST00000559152 NAA30Q147X3 362 aaPredicted RBP12.51□□□□□ -0.41
CLPX-204ENST00000559152 KIF4BQ2VIQ3 1234 aa12.51□□□□□ -0.41
CLPX-204ENST00000559152 ZCWPW2Q504Y3 356 aa12.51□□□□□ -0.41
CLPX-204ENST00000559152 LRRC55Q6ZSA7 311 aa12.51□□□□□ -0.41
CLPX-204ENST00000559152 EMILIN3Q9NT22 766 aa12.51□□□□□ -0.41
CLPX-204ENST00000559152 ARGLU1Q9NWB6 273 aaPredicted RBP12.51□□□□□ -0.41
CLPX-204ENST00000559152 COL4A3BPQ9Y5P4 624 aa12.51□□□□□ -0.41
CLPX-204ENST00000559152 TRAF5O00463 557 aa12.5□□□□□ -0.41
CLPX-204ENST00000559152 FANCGO15287 622 aa12.5□□□□□ -0.41
CLPX-204ENST00000559152 CFBP00751 764 aa12.5□□□□□ -0.41
CLPX-204ENST00000559152 STAT3P40763 770 aa12.5□□□□□ -0.41
CLPX-204ENST00000559152 ERCC6LQ2NKX8 1250 aa12.5□□□□□ -0.41
CLPX-204ENST00000559152 EDRF1Q3B7T1 1238 aa12.5□□□□□ -0.41
CLPX-204ENST00000559152 ZNF569Q5MCW4 686 aa12.5□□□□□ -0.41
CLPX-204ENST00000559152 ACRBPQ8NEB7 543 aa12.5□□□□□ -0.41
CLPX-204ENST00000559152 CHP1Q99653 195 aa12.5□□□□□ -0.41
CLPX-204ENST00000559152 SLF1Q9BQI6 1058 aa12.5□□□□□ -0.41
CLPX-204ENST00000559152 CARD6Q9BX69 1037 aa12.5□□□□□ -0.41
CLPX-204ENST00000559152 TMEM39BQ9GZU3 492 aa12.5□□□□□ -0.41
CLPX-204ENST00000559152 DEFB129Q9H1M3 183 aa12.5□□□□□ -0.41
CLPX-204ENST00000559152 TAOK3Q9H2K8 898 aa12.5□□□□□ -0.41
CLPX-204ENST00000559152 TUFT1Q9NNX1 390 aa12.5□□□□□ -0.41
CLPX-204ENST00000559152 MYOZ2Q9NPC6 264 aa12.5□□□□□ -0.41
CLPX-204ENST00000559152 VAV3Q9UKW4 847 aa12.5□□□□□ -0.41
CLPX-204ENST00000559152 PCDHA2Q9Y5H9 948 aa12.5□□□□□ -0.41
CLPX-204ENST00000559152 POTEFA5A3E0 1075 aa12.5□□□□□ -0.41
CLPX-204ENST00000559152 WNT10BO00744 389 aa12.5□□□□□ -0.41
CLPX-204ENST00000559152 POTEIP0CG38 1075 aa12.5□□□□□ -0.41
CLPX-204ENST00000559152 SPATA31C1P0DKV0 1188 aa12.5□□□□□ -0.41
CLPX-204ENST00000559152 RPS12P25398 132 aaKnown RBP12.5□□□□□ -0.41
CLPX-204ENST00000559152 HNRNPH3P31942 346 aaKnown RBP12.5□□□□□ -0.41
CLPX-204ENST00000559152 MARSP56192 900 aaKnown RBP12.5□□□□□ -0.41
CLPX-204ENST00000559152 SETQ01105 290 aaPredicted RBP12.5□□□□□ -0.41
CLPX-204ENST00000559152 PPP2R3AQ06190 1150 aa12.5□□□□□ -0.41
CLPX-204ENST00000559152 LRRC41Q15345 812 aa12.5□□□□□ -0.41
CLPX-204ENST00000559152 DALRD3Q5D0E6 543 aaKnown RBP12.5□□□□□ -0.41
CLPX-204ENST00000559152 POTEGQ6S5H5 508 aa12.5□□□□□ -0.41
CLPX-204ENST00000559152 POTEEQ6S8J3 1075 aa12.5□□□□□ -0.41
CLPX-204ENST00000559152 CEP112Q8N8E3 955 aa12.5□□□□□ -0.41
CLPX-204ENST00000559152 EEF2KMTQ96G04 330 aa12.5□□□□□ -0.41
CLPX-204ENST00000559152 NUCKS1Q9H1E3 243 aaKnown RBP12.5□□□□□ -0.41
CLPX-204ENST00000559152 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.5□□□□□ -0.41
CLPX-204ENST00000559152 PNMA2Q9UL42 364 aa12.5□□□□□ -0.41
CLPX-204ENST00000559152 FAM184BQ9ULE4 1060 aa12.5□□□□□ -0.41
CLPX-204ENST00000559152 V9GYY5 206 aaPredicted RBP12.5□□□□□ -0.41
CLPX-204ENST00000559152 IGLV3-22A0A075B6J6 115 aa12.49□□□□□ -0.41
CLPX-204ENST00000559152 EIF3CLB5ME19 914 aaKnown RBP12.49□□□□□ -0.41
CLPX-204ENST00000559152 TADA3O75528 432 aa12.49□□□□□ -0.41
CLPX-204ENST00000559152 EYA4O95677 639 aa12.49□□□□□ -0.41
CLPX-204ENST00000559152 CCDC40Q4G0X9 1142 aa12.49□□□□□ -0.41
CLPX-204ENST00000559152 KIAA1755Q5JYT7 1200 aa12.49□□□□□ -0.41
CLPX-204ENST00000559152 CCDC174Q6PII3 467 aa12.49□□□□□ -0.41
CLPX-204ENST00000559152 WDR59Q6PJI9 974 aa12.49□□□□□ -0.41
CLPX-204ENST00000559152 MIGA2Q7L4E1 593 aa12.49□□□□□ -0.41
CLPX-204ENST00000559152 KRT26Q7Z3Y9 468 aa12.49□□□□□ -0.41
CLPX-204ENST00000559152 LPAR1Q92633 364 aa12.49□□□□□ -0.41
CLPX-204ENST00000559152 EIF3CQ99613 913 aaKnown RBP12.49□□□□□ -0.41
CLPX-204ENST00000559152 NAPGQ99747 312 aaPredicted RBP12.49□□□□□ -0.41
CLPX-204ENST00000559152 WDR11Q9BZH6 1224 aa12.49□□□□□ -0.41
CLPX-204ENST00000559152 AGPAT5Q9NUQ2 364 aa12.49□□□□□ -0.41
CLPX-204ENST00000559152 PGAP2Q9UHJ9 254 aa12.49□□□□□ -0.41
CLPX-204ENST00000559152 SIK3Q9Y2K2 1263 aa12.49□□□□□ -0.41
CLPX-204ENST00000559152 KRT86O43790 486 aa12.49□□□□□ -0.41
CLPX-204ENST00000559152 POLD1P28340 1107 aa12.49□□□□□ -0.41
CLPX-204ENST00000559152 GIT2Q14161 759 aa12.49□□□□□ -0.41
CLPX-204ENST00000559152 ARSHQ5FYA8 562 aa12.49□□□□□ -0.41
CLPX-204ENST00000559152 TXLNBQ8N3L3 684 aa12.49□□□□□ -0.41
CLPX-204ENST00000559152 SAMD3Q8N6K7 520 aa12.49□□□□□ -0.41
CLPX-204ENST00000559152 EIF2AK1Q9BQI3 630 aaKnown RBP12.49□□□□□ -0.41
CLPX-204ENST00000559152 TSGA10Q9BZW7 698 aa12.49□□□□□ -0.41
CLPX-204ENST00000559152 NHEJ1Q9H9Q4 299 aaPredicted RBP12.49□□□□□ -0.41
CLPX-204ENST00000559152 CDC23Q9UJX2 597 aa12.49□□□□□ -0.41
CLPX-204ENST00000559152 PLAGL2Q9UPG8 496 aa12.49□□□□□ -0.41
CLPX-204ENST00000559152 RASSF10A6NK89 507 aa12.48□□□□□ -0.41
CLPX-204ENST00000559152 CETN3O15182 167 aa12.48□□□□□ -0.41
CLPX-204ENST00000559152 GAP43P17677 238 aa12.48□□□□□ -0.41
CLPX-204ENST00000559152 ARHGAP25P42331 645 aa12.48□□□□□ -0.41
CLPX-204ENST00000559152 PPP2R5CQ13362 524 aa12.48□□□□□ -0.41
CLPX-204ENST00000559152 SPA17Q15506 151 aa12.48□□□□□ -0.41
CLPX-204ENST00000559152 CEP55Q53EZ4 464 aa12.48□□□□□ -0.41
CLPX-204ENST00000559152 LRCH2Q5VUJ6 765 aa12.48□□□□□ -0.41
CLPX-204ENST00000559152 OTOP1Q7RTM1 612 aa12.48□□□□□ -0.41
CLPX-204ENST00000559152 KIAA1328Q86T90 577 aa12.48□□□□□ -0.41
CLPX-204ENST00000559152 MCF2L2Q86YR7 1114 aa12.48□□□□□ -0.41
CLPX-204ENST00000559152 ZC3H3Q8IXZ2 948 aaKnown RBP12.48□□□□□ -0.41
CLPX-204ENST00000559152 GPR161Q8N6U8 529 aaKnown RBP12.48□□□□□ -0.41
CLPX-204ENST00000559152 NEK11Q8NG66 645 aa12.48□□□□□ -0.41
CLPX-204ENST00000559152 SCFD1Q8WVM8 642 aa12.48□□□□□ -0.41
CLPX-204ENST00000559152 GOLGA1Q92805 767 aa12.48□□□□□ -0.41
CLPX-204ENST00000559152 SLC5A5Q92911 643 aa12.48□□□□□ -0.41
CLPX-204ENST00000559152 CCDC42Q96M95 316 aa12.48□□□□□ -0.41
CLPX-204ENST00000559152 IRX2Q9BZI1 471 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms