RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 RGS20O76081 388 aa13.8□□□□□ -0.2
TPM1-216ENST00000558910 GGPS1O95749 300 aa13.8□□□□□ -0.2
TPM1-216ENST00000558910 MMP3P08254 477 aa13.8□□□□□ -0.2
TPM1-216ENST00000558910 ZNF286BP0CG31 522 aa13.8□□□□□ -0.2
TPM1-216ENST00000558910 ACRP10323 421 aa13.8□□□□□ -0.2
TPM1-216ENST00000558910 CYP2C9P11712 490 aa13.8□□□□□ -0.2
TPM1-216ENST00000558910 CYP2C18P33260 490 aa13.8□□□□□ -0.2
TPM1-216ENST00000558910 CDK7P50613 346 aa13.8□□□□□ -0.2
TPM1-216ENST00000558910 PURAQ00577 322 aaKnown RBP13.8□□□□□ -0.2
TPM1-216ENST00000558910 ARHGAP1Q07960 439 aa13.8□□□□□ -0.2
TPM1-216ENST00000558910 PWP2Q15269 919 aaKnown RBP13.8□□□□□ -0.2
TPM1-216ENST00000558910 SHHQ15465 462 aa13.8□□□□□ -0.2
TPM1-216ENST00000558910 NBPF20Q3BBV1 942 aa13.8□□□□□ -0.2
TPM1-216ENST00000558910 CCDC62Q6P9F0 684 aa13.8□□□□□ -0.2
TPM1-216ENST00000558910 VSIG10LQ86VR7 867 aa13.8□□□□□ -0.2
TPM1-216ENST00000558910 KCNB2Q92953 911 aa13.8□□□□□ -0.2
TPM1-216ENST00000558910 FAM217BQ9NTX9 383 aaPredicted RBP13.8□□□□□ -0.2
TPM1-216ENST00000558910 DDX41Q9UJV9 622 aaKnown RBP13.8□□□□□ -0.2
TPM1-216ENST00000558910 Q9Y3F1 56 aa13.8□□□□□ -0.2
TPM1-216ENST00000558910 CYP46A1Q9Y6A2 500 aa13.8□□□□□ -0.2
TPM1-216ENST00000558910 UMODL1Q5DID0 1318 aa13.8□□□□□ -0.2
TPM1-216ENST00000558910 SPDYE3A6NKU9 549 aa13.79□□□□□ -0.2
TPM1-216ENST00000558910 B4GALT4O60513 344 aa13.79□□□□□ -0.2
TPM1-216ENST00000558910 MLLT3P42568 568 aaPredicted RBP13.79□□□□□ -0.2
TPM1-216ENST00000558910 EPHB4P54760 987 aa13.79□□□□□ -0.2
TPM1-216ENST00000558910 SP2Q02086 613 aa13.79□□□□□ -0.2
TPM1-216ENST00000558910 C1orf53Q5VUE5 145 aa13.79□□□□□ -0.2
TPM1-216ENST00000558910 RUFY3Q7L099 469 aa13.79□□□□□ -0.2
TPM1-216ENST00000558910 ANKRD33Q7Z3H0 272 aa13.79□□□□□ -0.2
TPM1-216ENST00000558910 FAM126BQ8IXS8 530 aa13.79□□□□□ -0.2
TPM1-216ENST00000558910 SPATA33Q96N06 139 aa13.79□□□□□ -0.2
TPM1-216ENST00000558910 SLC26A6Q9BXS9 759 aa13.79□□□□□ -0.2
TPM1-216ENST00000558910 MLXIPQ9HAP2 919 aa13.79□□□□□ -0.2
TPM1-216ENST00000558910 CDHR5Q9HBB8 845 aa13.79□□□□□ -0.2
TPM1-216ENST00000558910 PDRG1Q9NUG6 133 aa13.79□□□□□ -0.2
TPM1-216ENST00000558910 TMEM260Q9NX78 707 aa13.79□□□□□ -0.2
TPM1-216ENST00000558910 KIAA1468Q9P260 1216 aa13.79□□□□□ -0.2
TPM1-216ENST00000558910 LAMA3Q16787 3333 aa13.79□□□□□ -0.2
TPM1-216ENST00000558910 SZT2Q5T011 3432 aa13.78□□□□□ -0.2
TPM1-216ENST00000558910 LAMA2P24043 3122 aaKnown RBP13.78□□□□□ -0.2
TPM1-216ENST00000558910 SMCO2A6NFE2 343 aa13.78□□□□□ -0.2
TPM1-216ENST00000558910 KIAA0355O15063 1070 aa13.78□□□□□ -0.2
TPM1-216ENST00000558910 UBA1P22314 1058 aaKnown RBP13.78□□□□□ -0.2
TPM1-216ENST00000558910 SMARCA1P28370 1054 aa13.78□□□□□ -0.2
TPM1-216ENST00000558910 BMP8BP34820 402 aa13.78□□□□□ -0.2
TPM1-216ENST00000558910 MRPS9P82933 396 aaKnown RBP13.78□□□□□ -0.2
TPM1-216ENST00000558910 AKAP17AQ02040 695 aaKnown RBP13.78□□□□□ -0.2
TPM1-216ENST00000558910 FPGSQ05932 587 aa13.78□□□□□ -0.2
TPM1-216ENST00000558910 JAKMIP3Q5VZ66 844 aa13.78□□□□□ -0.2
TPM1-216ENST00000558910 CYFIP1Q7L576 1253 aa13.78□□□□□ -0.2
TPM1-216ENST00000558910 FAM161BQ96MY7 647 aa13.78□□□□□ -0.2
TPM1-216ENST00000558910 MAP3K20Q9NYL2 800 aaKnown RBP13.78□□□□□ -0.2
TPM1-216ENST00000558910 HCSTQ9UBK5 93 aa13.78□□□□□ -0.2
TPM1-216ENST00000558910 PCDHA6Q9UN73 950 aa13.78□□□□□ -0.2
TPM1-216ENST00000558910 NOD1Q9Y239 953 aa13.78□□□□□ -0.2
TPM1-216ENST00000558910 TELO2Q9Y4R8 837 aa13.78□□□□□ -0.2
TPM1-216ENST00000558910 PCDHA8Q9Y5H6 950 aa13.78□□□□□ -0.2
TPM1-216ENST00000558910 MROH7Q68CQ1 1323 aa13.78□□□□□ -0.2
TPM1-216ENST00000558910 A6NJR5 290 aa13.77□□□□□ -0.21
TPM1-216ENST00000558910 GOLGA8CPA6NN73 597 aa13.77□□□□□ -0.21
TPM1-216ENST00000558910 STXBP3O00186 592 aa13.77□□□□□ -0.21
TPM1-216ENST00000558910 TIMP1P01033 207 aa13.77□□□□□ -0.21
TPM1-216ENST00000558910 CSF2RAP15509 400 aa13.77□□□□□ -0.21
TPM1-216ENST00000558910 ADCY7P51828 1080 aa13.77□□□□□ -0.21
TPM1-216ENST00000558910 FUT2Q10981 343 aa13.77□□□□□ -0.21
TPM1-216ENST00000558910 TOB2Q14106 344 aaPredicted RBP13.77□□□□□ -0.21
TPM1-216ENST00000558910 UTP14CQ5TAP6 766 aaKnown RBP13.77□□□□□ -0.21
TPM1-216ENST00000558910 Q7L0L9 218 aa13.77□□□□□ -0.21
TPM1-216ENST00000558910 SCLYQ96I15 445 aa13.77□□□□□ -0.21
TPM1-216ENST00000558910 TOX2Q96NM4 488 aa13.77□□□□□ -0.21
TPM1-216ENST00000558910 ALDH8A1Q9H2A2 487 aaPredicted RBP13.77□□□□□ -0.21
TPM1-216ENST00000558910 HIPK3Q9H422 1215 aa13.77□□□□□ -0.21
TPM1-216ENST00000558910 TBX21Q9UL17 535 aa13.77□□□□□ -0.21
TPM1-216ENST00000558910 NOP56O00567 594 aaKnown RBP13.76□□□□□ -0.21
TPM1-216ENST00000558910 ADAMTS3O15072 1205 aa13.76□□□□□ -0.21
TPM1-216ENST00000558910 PDIA3P30101 505 aaKnown RBP13.76□□□□□ -0.21
TPM1-216ENST00000558910 NKX3-2P78367 333 aa13.76□□□□□ -0.21
TPM1-216ENST00000558910 GHRHRQ02643 423 aa13.76□□□□□ -0.21
TPM1-216ENST00000558910 LAMC2Q13753 1193 aa13.76□□□□□ -0.21
TPM1-216ENST00000558910 DGKDQ16760 1214 aa13.76□□□□□ -0.21
TPM1-216ENST00000558910 HSDL1Q3SXM5 330 aa13.76□□□□□ -0.21
TPM1-216ENST00000558910 GNPTABQ3T906 1256 aa13.76□□□□□ -0.21
TPM1-216ENST00000558910 CELF3Q5SZQ8 465 aaKnown RBP13.76□□□□□ -0.21
TPM1-216ENST00000558910 SAMD3Q8N6K7 520 aa13.76□□□□□ -0.21
TPM1-216ENST00000558910 RNPC3Q96LT9 517 aaKnown RBP13.76□□□□□ -0.21
TPM1-216ENST00000558910 CCDC196A0A1B0GTZ2 297 aa13.75□□□□□ -0.21
TPM1-216ENST00000558910 CPLX1O14810 134 aa13.75□□□□□ -0.21
TPM1-216ENST00000558910 CD4P01730 458 aa13.75□□□□□ -0.21
TPM1-216ENST00000558910 ZNF76P36508 570 aa13.75□□□□□ -0.21
TPM1-216ENST00000558910 ZNF200P98182 395 aaPredicted RBP13.75□□□□□ -0.21
TPM1-216ENST00000558910 SEMA3FQ13275 785 aa13.75□□□□□ -0.21
TPM1-216ENST00000558910 MYSM1Q5VVJ2 828 aa13.75□□□□□ -0.21
TPM1-216ENST00000558910 DEFB128Q7Z7B8 93 aa13.75□□□□□ -0.21
TPM1-216ENST00000558910 NLRX1Q86UT6 975 aa13.75□□□□□ -0.21
TPM1-216ENST00000558910 C7orf31Q8N865 590 aa13.75□□□□□ -0.21
TPM1-216ENST00000558910 SLC43A3Q8NBI5 491 aa13.75□□□□□ -0.21
TPM1-216ENST00000558910 RASGRP4Q8TDF6 673 aa13.75□□□□□ -0.21
TPM1-216ENST00000558910 KAT2BQ92831 832 aa13.75□□□□□ -0.21
TPM1-216ENST00000558910 WNT2BQ93097 391 aa13.75□□□□□ -0.21
TPM1-216ENST00000558910 MAF1Q9H063 256 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms