RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 MAN1A2O60476 641 aa15.09■□□□□ 0.01
SPG11-210ENST00000558319 KRT14P02533 472 aa15.09■□□□□ 0.01
SPG11-210ENST00000558319 PLS3P13797 630 aa15.09■□□□□ 0.01
SPG11-210ENST00000558319 NPR1P16066 1061 aa15.09■□□□□ 0.01
SPG11-210ENST00000558319 ZNF18P17022 549 aa15.09■□□□□ 0.01
SPG11-210ENST00000558319 KRT33BQ14525 404 aa15.09■□□□□ 0.01
SPG11-210ENST00000558319 RFX8Q6ZV50 586 aa15.09■□□□□ 0.01
SPG11-210ENST00000558319 NOSTRINQ8IVI9 506 aa15.09■□□□□ 0.01
SPG11-210ENST00000558319 NRBF2Q96F24 287 aa15.09■□□□□ 0.01
SPG11-210ENST00000558319 TESK2Q96S53 571 aa15.09■□□□□ 0.01
SPG11-210ENST00000558319 SLC38A10Q9HBR0 1119 aa15.09■□□□□ 0.01
SPG11-210ENST00000558319 SLC5A4Q9NY91 659 aa15.09■□□□□ 0.01
SPG11-210ENST00000558319 MRPL11Q9Y3B7 192 aaKnown RBP15.09■□□□□ 0.01
SPG11-210ENST00000558319 ZMYM3Q14202 1370 aa15.09■□□□□ 0.01
SPG11-210ENST00000558319 ATP8B1O43520 1251 aa15.08■□□□□ 0.01
SPG11-210ENST00000558319 NSUN2Q08J23 767 aaKnown RBP eCLIP15.08■□□□□ 0.01
SPG11-210ENST00000558319 PDCLQ13371 301 aa15.08■□□□□ 0.01
SPG11-210ENST00000558319 SGO2Q562F6 1265 aa15.08■□□□□ 0.01
SPG11-210ENST00000558319 RINT1Q6NUQ1 792 aa15.08■□□□□ 0.01
SPG11-210ENST00000558319 SPZ1Q9BXG8 430 aa15.08■□□□□ 0.01
SPG11-210ENST00000558319 PRKAG2Q9UGJ0 569 aa15.08■□□□□ 0.01
SPG11-210ENST00000558319 PHLPP2Q6ZVD8 1323 aa15.08■□□□□ 0.01
SPG11-210ENST00000558319 ZWILCHQ9H900 591 aa15.08■□□□□ 0
SPG11-210ENST00000558319 LZTS1Q9Y250 596 aa15.08■□□□□ 0
SPG11-210ENST00000558319 A2MP01023 1474 aa15.08■□□□□ 0
SPG11-210ENST00000558319 FGAP02671 866 aa15.08■□□□□ 0
SPG11-210ENST00000558319 OR52Z1P0C646 297 aa15.08■□□□□ 0
SPG11-210ENST00000558319 CDC25BP30305 580 aa15.08■□□□□ 0
SPG11-210ENST00000558319 EIF4A1P60842 406 aaKnown RBP15.08■□□□□ 0
SPG11-210ENST00000558319 ZNF394Q53GI3 561 aa15.08■□□□□ 0
SPG11-210ENST00000558319 BBOF1Q8ND07 529 aa15.08■□□□□ 0
SPG11-210ENST00000558319 IQCDQ96DY2 449 aa15.08■□□□□ 0
SPG11-210ENST00000558319 NLRP4Q96MN2 994 aa15.08■□□□□ 0
SPG11-210ENST00000558319 EFHD1Q9BUP0 239 aa15.08■□□□□ 0
SPG11-210ENST00000558319 CRKLP46109 303 aaKnown RBP15.08■□□□□ 0
SPG11-210ENST00000558319 DPCR1Q3MIW9 517 aa15.08■□□□□ 0
SPG11-210ENST00000558319 MMS22LQ6ZRQ5 1243 aa15.08■□□□□ 0
SPG11-210ENST00000558319 NEK8Q86SG6 692 aa15.08■□□□□ 0
SPG11-210ENST00000558319 TADA2BQ86TJ2 420 aa15.08■□□□□ 0
SPG11-210ENST00000558319 HNRNPCL2B2RXH8 293 aa15.08■□□□□ 0
SPG11-210ENST00000558319 HNRNPCL1O60812 293 aaKnown RBP15.08■□□□□ 0
SPG11-210ENST00000558319 PNMA6AP0CW24 399 aaPredicted RBP15.08■□□□□ 0
SPG11-210ENST00000558319 PDE6AP16499 860 aa15.08■□□□□ 0
SPG11-210ENST00000558319 RBM6P78332 1123 aaKnown RBP15.08■□□□□ 0
SPG11-210ENST00000558319 SKOR1P84550 965 aa15.08■□□□□ 0
SPG11-210ENST00000558319 NUGGCQ68CJ6 796 aa15.08■□□□□ 0
SPG11-210ENST00000558319 USP17L2Q6R6M4 530 aa15.08■□□□□ 0
SPG11-210ENST00000558319 SNX25Q9H3E2 840 aa15.08■□□□□ 0
SPG11-210ENST00000558319 RGS9BPQ6ZS82 235 aa15.07■□□□□ 0
SPG11-210ENST00000558319 GSPT2Q8IYD1 628 aaKnown RBP15.07■□□□□ 0
SPG11-210ENST00000558319 DNAAF3Q8N9W5 541 aa15.07■□□□□ 0
SPG11-210ENST00000558319 SRP68Q9UHB9 627 aaKnown RBP15.07■□□□□ 0
SPG11-210ENST00000558319 S100BP04271 92 aaPredicted RBP15.07■□□□□ 0
SPG11-210ENST00000558319 HSPD1P10809 573 aaKnown RBP15.07■□□□□ 0
SPG11-210ENST00000558319 SPTLC3Q9NUV7 552 aa15.07■□□□□ 0
SPG11-210ENST00000558319 SLAIN2Q9P270 581 aa15.07■□□□□ 0
SPG11-210ENST00000558319 HNRNPCP07910 306 aaKnown RBP eCLIP15.07■□□□□ 07e-10■■■■■ 30.9
SPG11-210ENST00000558319 FANCBQ8NB91 859 aa15.07■□□□□ 0
SPG11-210ENST00000558319 FBXO18Q8NFZ0 1043 aa15.07■□□□□ 0
SPG11-210ENST00000558319 PDCD6IPQ8WUM4 868 aaKnown RBP15.07■□□□□ 0
SPG11-210ENST00000558319 RUNDC3BQ96NL0 473 aa15.07■□□□□ 0
SPG11-210ENST00000558319 TUBGCP2Q9BSJ2 902 aa15.07■□□□□ 0
SPG11-210ENST00000558319 ANTXR1Q9H6X2 564 aa15.07■□□□□ 0
SPG11-210ENST00000558319 ATP8A2Q9NTI2 1148 aa15.07■□□□□ 0
SPG11-210ENST00000558319 WARS2Q9UGM6 360 aaKnown RBP15.07■□□□□ 0
SPG11-210ENST00000558319 H3BRJ5 948 aa15.07■□□□□ 0
SPG11-210ENST00000558319 MT-ND3P03897 115 aa15.07■□□□□ 0
SPG11-210ENST00000558319 MYBP10242 640 aa15.07■□□□□ 0
SPG11-210ENST00000558319 KITP10721 976 aa15.07■□□□□ 0
SPG11-210ENST00000558319 EXOC3L4Q17RC7 722 aa15.07■□□□□ 0
SPG11-210ENST00000558319 RWDD4Q6NW29 188 aaKnown RBP15.07■□□□□ 0
SPG11-210ENST00000558319 TRIM59Q8IWR1 403 aa15.07■□□□□ 0
SPG11-210ENST00000558319 HAUS2Q9NVX0 235 aa15.07■□□□□ 0
SPG11-210ENST00000558319 A0A0G2JND7 137 aa15.07■□□□□ 0
SPG11-210ENST00000558319 ZBTB22O15209 634 aa15.07■□□□□ 0
SPG11-210ENST00000558319 CPP00450 1065 aa15.07■□□□□ 0
SPG11-210ENST00000558319 USP17L8P0C7I0 530 aa15.07■□□□□ 0
SPG11-210ENST00000558319 SCRN1Q12765 414 aa15.07■□□□□ 0
SPG11-210ENST00000558319 TERF2Q15554 542 aa15.07■□□□□ 0
SPG11-210ENST00000558319 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.07■□□□□ 0
SPG11-210ENST00000558319 TRAPPC8Q9Y2L5 1435 aa15.07■□□□□ 0
SPG11-210ENST00000558319 KDM3AQ9Y4C1 1321 aa15.06■□□□□ 0
SPG11-210ENST00000558319 CMA1P23946 247 aa15.06■□□□□ 0
SPG11-210ENST00000558319 PSMC1P62191 440 aaKnown RBP15.06■□□□□ 0
SPG11-210ENST00000558319 PIGSQ96S52 555 aa15.06■□□□□ 0
SPG11-210ENST00000558319 NFU1Q9UMS0 254 aa15.06■□□□□ 0
SPG11-210ENST00000558319 FAM196BA6NMK8 535 aa15.06■□□□□ 0
SPG11-210ENST00000558319 SPAG7O75391 227 aa15.06■□□□□ 0
SPG11-210ENST00000558319 GFPT2O94808 682 aa15.06■□□□□ 0
SPG11-210ENST00000558319 KCTD2Q14681 263 aa15.06■□□□□ 0
SPG11-210ENST00000558319 BEND6Q5SZJ8 279 aaPredicted RBP15.06■□□□□ 0
SPG11-210ENST00000558319 AP5M1Q9H0R1 490 aa15.06■□□□□ 0
SPG11-210ENST00000558319 KMT5AQ9NQR1 393 aa15.06■□□□□ 0
SPG11-210ENST00000558319 POLR3EQ9NVU0 708 aa15.06■□□□□ 0
SPG11-210ENST00000558319 STK24Q9Y6E0 443 aa15.06■□□□□ 0
SPG11-210ENST00000558319 ACSL3O95573 720 aa15.06■□□□□ 0
SPG11-210ENST00000558319 SKIV2LQ15477 1246 aaKnown RBP15.06■□□□□ 0
SPG11-210ENST00000558319 FAM196AQ6ZSG2 479 aa15.06■□□□□ 0
SPG11-210ENST00000558319 CALN1Q9BXU9 219 aa15.06■□□□□ 0
SPG11-210ENST00000558319 NT5C3AQ9H0P0 336 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms